RNA–Protein interactions for RNA: ENST00000533905.1

CLP1-206, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 4

Gene CLP1, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-206ENST00000533905 CACNA1AO00555 2505 aa11.32□□□□□ -0.6
CLP1-206ENST00000533905 ANHXE9PGG2 379 aa11.32□□□□□ -0.6
CLP1-206ENST00000533905 E9PMD0 336 aa11.32□□□□□ -0.6
CLP1-206ENST00000533905 ZMYND10O75800 440 aa11.32□□□□□ -0.6
CLP1-206ENST00000533905 CD2BP2O95400 341 aaKnown RBP11.32□□□□□ -0.6
CLP1-206ENST00000533905 OR52Z1P0C646 297 aa11.32□□□□□ -0.6
CLP1-206ENST00000533905 LAMP2P13473 410 aa11.32□□□□□ -0.6
CLP1-206ENST00000533905 CD72P21854 359 aa11.32□□□□□ -0.6
CLP1-206ENST00000533905 CLCN5P51795 746 aa11.32□□□□□ -0.6
CLP1-206ENST00000533905 TUSC3Q13454 348 aa11.32□□□□□ -0.6
CLP1-206ENST00000533905 TFDP1Q14186 410 aa11.32□□□□□ -0.6
CLP1-206ENST00000533905 PSMD5Q16401 504 aa11.32□□□□□ -0.6
CLP1-206ENST00000533905 FAM187BQ17R55 369 aa11.32□□□□□ -0.6
CLP1-206ENST00000533905 USP41Q3LFD5 358 aa11.32□□□□□ -0.6
CLP1-206ENST00000533905 FAM171A1Q5VUB5 890 aa11.32□□□□□ -0.6
CLP1-206ENST00000533905 CEP57Q86XR8 500 aa11.32□□□□□ -0.6
CLP1-206ENST00000533905 PLCD3Q8N3E9 789 aa11.32□□□□□ -0.6
CLP1-206ENST00000533905 CNNM3Q8NE01 707 aa11.32□□□□□ -0.6
CLP1-206ENST00000533905 C18orf25Q96B23 403 aaPredicted RBP11.32□□□□□ -0.6
CLP1-206ENST00000533905 ACSF2Q96CM8 615 aaPredicted RBP11.32□□□□□ -0.6
CLP1-206ENST00000533905 DDX27Q96GQ7 796 aaKnown RBP11.32□□□□□ -0.6
CLP1-206ENST00000533905 ZBTB45Q96K62 511 aaPredicted RBP11.32□□□□□ -0.6
CLP1-206ENST00000533905 SNX27Q96L92 541 aa11.32□□□□□ -0.6
CLP1-206ENST00000533905 PPP1R10Q96QC0 940 aaKnown RBP11.32□□□□□ -0.6
CLP1-206ENST00000533905 MMTAG2Q9BU76 263 aaKnown RBP11.32□□□□□ -0.6
CLP1-206ENST00000533905 RUSC1Q9BVN2 902 aa11.32□□□□□ -0.6
CLP1-206ENST00000533905 HAPLN2Q9GZV7 340 aa11.32□□□□□ -0.6
CLP1-206ENST00000533905 UBN1Q9NPG3 1134 aa11.32□□□□□ -0.6
CLP1-206ENST00000533905 FNIP2Q9P278 1114 aa11.32□□□□□ -0.6
CLP1-206ENST00000533905 FBXL21Q9UKT6 434 aa11.32□□□□□ -0.6
CLP1-206ENST00000533905 PCDHB6Q9Y5E3 794 aa11.32□□□□□ -0.6
CLP1-206ENST00000533905 TADA2AO75478 443 aa11.31□□□□□ -0.6
CLP1-206ENST00000533905 C8AP07357 584 aa11.31□□□□□ -0.6
CLP1-206ENST00000533905 XBP1P17861 261 aa11.31□□□□□ -0.6
CLP1-206ENST00000533905 CYP11B2P19099 503 aa11.31□□□□□ -0.6
CLP1-206ENST00000533905 CCR2P41597 374 aa11.31□□□□□ -0.6
CLP1-206ENST00000533905 CDR1P51861 262 aa11.31□□□□□ -0.6
CLP1-206ENST00000533905 OSTNP61366 133 aa11.31□□□□□ -0.6
CLP1-206ENST00000533905 GPC5P78333 572 aa11.31□□□□□ -0.6
CLP1-206ENST00000533905 PRPF4BQ13523 1007 aaKnown RBP11.31□□□□□ -0.6
CLP1-206ENST00000533905 HSCBQ8IWL3 235 aa11.31□□□□□ -0.6
CLP1-206ENST00000533905 ADSSL1Q8N142 457 aa11.31□□□□□ -0.6
CLP1-206ENST00000533905 SLC7A14Q8TBB6 771 aa11.31□□□□□ -0.6
CLP1-206ENST00000533905 PIK3R5Q8WYR1 880 aa11.31□□□□□ -0.6
CLP1-206ENST00000533905 RSPH1Q8WYR4 309 aa11.31□□□□□ -0.6
CLP1-206ENST00000533905 TCEAL4Q96EI5 215 aa11.31□□□□□ -0.6
CLP1-206ENST00000533905 NAP1L4Q99733 375 aaKnown RBP11.31□□□□□ -0.6
CLP1-206ENST00000533905 PRRX2Q99811 253 aa11.31□□□□□ -0.6
CLP1-206ENST00000533905 KXD1Q9BQD3 176 aa11.31□□□□□ -0.6
CLP1-206ENST00000533905 POLR3CQ9BUI4 534 aaPredicted RBP11.31□□□□□ -0.6
CLP1-206ENST00000533905 COLEC11Q9BWP8 271 aa11.31□□□□□ -0.6
CLP1-206ENST00000533905 CDT1Q9H211 546 aa11.31□□□□□ -0.6
CLP1-206ENST00000533905 BHMT2Q9H2M3 363 aa11.31□□□□□ -0.6
CLP1-206ENST00000533905 TUFT1Q9NNX1 390 aa11.31□□□□□ -0.6
CLP1-206ENST00000533905 PRMT7Q9NVM4 692 aaPredicted RBP11.31□□□□□ -0.6
CLP1-206ENST00000533905 DNMT3BQ9UBC3 853 aaKnown RBP11.31□□□□□ -0.6
CLP1-206ENST00000533905 COL4A2P08572 1712 aa11.31□□□□□ -0.6
CLP1-206ENST00000533905 SF3B1O75533 1304 aaKnown RBP eCLIP11.31□□□□□ -0.6
CLP1-206ENST00000533905 NPHP3-ACAD11A0A0J9YXS1 232 aa11.3□□□□□ -0.6
CLP1-206ENST00000533905 ACKR2O00590 384 aa11.3□□□□□ -0.6
CLP1-206ENST00000533905 SEC24AO95486 1093 aa11.3□□□□□ -0.6
CLP1-206ENST00000533905 CEBPBP17676 345 aa11.3□□□□□ -0.6
CLP1-206ENST00000533905 RPA1P27694 616 aa11.3□□□□□ -0.6
CLP1-206ENST00000533905 OR1D2P34982 312 aa11.3□□□□□ -0.6
CLP1-206ENST00000533905 CACNB1Q02641 598 aaPredicted RBP11.3□□□□□ -0.6
CLP1-206ENST00000533905 BMS1Q14692 1282 aaKnown RBP11.3□□□□□ -0.6
CLP1-206ENST00000533905 TTC38Q5R3I4 469 aa11.3□□□□□ -0.6
CLP1-206ENST00000533905 NPAS3Q8IXF0 933 aa11.3□□□□□ -0.6
CLP1-206ENST00000533905 DCLK2Q8N568 766 aa11.3□□□□□ -0.6
CLP1-206ENST00000533905 WASF1Q92558 559 aa11.3□□□□□ -0.6
CLP1-206ENST00000533905 FGF13Q92913 245 aa11.3□□□□□ -0.6
CLP1-206ENST00000533905 TTPALQ9BTX7 342 aa11.3□□□□□ -0.6
CLP1-206ENST00000533905 BRMS1Q9HCU9 246 aa11.3□□□□□ -0.6
CLP1-206ENST00000533905 PTPRHQ9HD43 1115 aa11.3□□□□□ -0.6
CLP1-206ENST00000533905 DDX19AQ9NUU7 478 aaKnown RBP11.3□□□□□ -0.6
CLP1-206ENST00000533905 MYH15Q9Y2K3 1946 aa11.3□□□□□ -0.6
CLP1-206ENST00000533905 ARHGEF35A5YM69 484 aa11.29□□□□□ -0.6
CLP1-206ENST00000533905 SFI1A8K8P3 1242 aa11.29□□□□□ -0.6
CLP1-206ENST00000533905 N4BP3O15049 544 aa11.29□□□□□ -0.6
CLP1-206ENST00000533905 HIP1RO75146 1068 aa11.29□□□□□ -0.6
CLP1-206ENST00000533905 VNN2O95498 520 aa11.29□□□□□ -0.6
CLP1-206ENST00000533905 SRFP11831 508 aa11.29□□□□□ -0.6
CLP1-206ENST00000533905 HARSP12081 509 aaKnown RBP11.29□□□□□ -0.6
CLP1-206ENST00000533905 FGFR3P22607 806 aa11.29□□□□□ -0.6
CLP1-206ENST00000533905 FSHRP23945 695 aa11.29□□□□□ -0.6
CLP1-206ENST00000533905 FCARP24071 287 aa11.29□□□□□ -0.6
CLP1-206ENST00000533905 CCT6AP40227 531 aaKnown RBP11.29□□□□□ -0.6
CLP1-206ENST00000533905 NAMPTP43490 491 aa11.29□□□□□ -0.6
CLP1-206ENST00000533905 GUCY2FP51841 1108 aa11.29□□□□□ -0.6
CLP1-206ENST00000533905 SPAG1Q07617 926 aa11.29□□□□□ -0.6
CLP1-206ENST00000533905 RAD51AP2Q09MP3 1159 aa11.29□□□□□ -0.6
CLP1-206ENST00000533905 SNW1Q13573 536 aaKnown RBP11.29□□□□□ -0.6
CLP1-206ENST00000533905 ANKRD1Q15327 319 aa11.29□□□□□ -0.6
CLP1-206ENST00000533905 ZBTB41Q5SVQ8 909 aa11.29□□□□□ -0.6
CLP1-206ENST00000533905 ATF7IP2Q5U623 682 aa11.29□□□□□ -0.6
CLP1-206ENST00000533905 EXOC8Q8IYI6 725 aa11.29□□□□□ -0.6
CLP1-206ENST00000533905 C8orf76Q96K31 380 aa11.29□□□□□ -0.6
CLP1-206ENST00000533905 CCDC43Q96MW1 224 aaKnown RBP11.29□□□□□ -0.6
CLP1-206ENST00000533905 PNMA5Q96PV4 448 aa11.29□□□□□ -0.6
CLP1-206ENST00000533905 TARS2Q9BW92 718 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms