RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 USP11P51784 963 aa13.71□□□□□ -0.21
SVIP-205ENST00000533774 NRLP54845 237 aa13.71□□□□□ -0.21
SVIP-205ENST00000533774 CREMQ03060 361 aa13.71□□□□□ -0.21
SVIP-205ENST00000533774 GRM2Q14416 872 aa13.71□□□□□ -0.21
SVIP-205ENST00000533774 PSMD5Q16401 504 aa13.71□□□□□ -0.21
SVIP-205ENST00000533774 AMHR2Q16671 573 aa13.71□□□□□ -0.21
SVIP-205ENST00000533774 PABPC1LQ4VXU2 614 aaKnown RBP13.71□□□□□ -0.21
SVIP-205ENST00000533774 WDR44Q5JSH3 913 aa13.71□□□□□ -0.21
SVIP-205ENST00000533774 AXDND1Q5T1B0 1012 aaPredicted RBP13.71□□□□□ -0.21
SVIP-205ENST00000533774 LIN9Q5TKA1 542 aa13.71□□□□□ -0.21
SVIP-205ENST00000533774 FERMT3Q86UX7 667 aa13.71□□□□□ -0.21
SVIP-205ENST00000533774 CDR2LQ86X02 465 aaPredicted RBP13.71□□□□□ -0.21
SVIP-205ENST00000533774 RNF149Q8NC42 400 aa13.71□□□□□ -0.21
SVIP-205ENST00000533774 ETNPPLQ8TBG4 499 aa13.71□□□□□ -0.21
SVIP-205ENST00000533774 TTPALQ9BTX7 342 aa13.71□□□□□ -0.21
SVIP-205ENST00000533774 CSRNP2Q9H175 543 aa13.71□□□□□ -0.21
SVIP-205ENST00000533774 LMAN1LQ9HAT1 526 aa13.71□□□□□ -0.21
SVIP-205ENST00000533774 C2orf42Q9NWW7 574 aa13.71□□□□□ -0.21
SVIP-205ENST00000533774 KCNH3Q9ULD8 1083 aa13.71□□□□□ -0.21
SVIP-205ENST00000533774 MRPS17Q9Y2R5 130 aaKnown RBP13.71□□□□□ -0.21
SVIP-205ENST00000533774 GIT1Q9Y2X7 761 aa13.71□□□□□ -0.21
SVIP-205ENST00000533774 ZBTB39O15060 712 aa13.7□□□□□ -0.22
SVIP-205ENST00000533774 XYLBO75191 536 aa13.7□□□□□ -0.22
SVIP-205ENST00000533774 NR1I2O75469 434 aa13.7□□□□□ -0.22
SVIP-205ENST00000533774 TADA2AO75478 443 aa13.7□□□□□ -0.22
SVIP-205ENST00000533774 KIF4AO95239 1232 aa13.7□□□□□ -0.22
SVIP-205ENST00000533774 PROS1P07225 676 aa13.7□□□□□ -0.22
SVIP-205ENST00000533774 POU2F2P09086 479 aa13.7□□□□□ -0.22
SVIP-205ENST00000533774 PSMC5P62195 406 aa13.7□□□□□ -0.22
SVIP-205ENST00000533774 AAMPQ13685 434 aa13.7□□□□□ -0.22
SVIP-205ENST00000533774 HSP90AA2PQ14568 343 aaPredicted RBP13.7□□□□□ -0.22
SVIP-205ENST00000533774 SF3A2Q15428 464 aaKnown RBP13.7□□□□□ -0.22
SVIP-205ENST00000533774 CCDC6Q16204 474 aa13.7□□□□□ -0.22
SVIP-205ENST00000533774 ADCK5Q3MIX3 580 aa13.7□□□□□ -0.22
SVIP-205ENST00000533774 Q4G0T1 1027 aa13.7□□□□□ -0.22
SVIP-205ENST00000533774 FAM171A1Q5VUB5 890 aa13.7□□□□□ -0.22
SVIP-205ENST00000533774 CEP57Q86XR8 500 aa13.7□□□□□ -0.22
SVIP-205ENST00000533774 PSPC1Q8WXF1 523 aaKnown RBP13.7□□□□□ -0.22
SVIP-205ENST00000533774 PKD1L2Q7Z442 2459 aa13.7□□□□□ -0.22
SVIP-205ENST00000533774 WDFY3Q8IZQ1 3526 aa13.69□□□□□ -0.22
SVIP-205ENST00000533774 NCANO14594 1321 aa13.69□□□□□ -0.22
SVIP-205ENST00000533774 SF3B1O75533 1304 aaKnown RBP eCLIP13.69□□□□□ -0.22
SVIP-205ENST00000533774 CASTOR2A6NHX0 329 aa13.69□□□□□ -0.22
SVIP-205ENST00000533774 C1QTNF9BB2RNN3 333 aa13.69□□□□□ -0.22
SVIP-205ENST00000533774 K7ESF4 209 aa13.69□□□□□ -0.22
SVIP-205ENST00000533774 B4GALT5O43286 388 aa13.69□□□□□ -0.22
SVIP-205ENST00000533774 PRPF3O43395 683 aaKnown RBP13.69□□□□□ -0.22
SVIP-205ENST00000533774 ERLIN2O94905 339 aa13.69□□□□□ -0.22
SVIP-205ENST00000533774 RHOP08100 348 aa13.69□□□□□ -0.22
SVIP-205ENST00000533774 C1QTNF9P0C862 333 aa13.69□□□□□ -0.22
SVIP-205ENST00000533774 CHRNB1P11230 501 aa13.69□□□□□ -0.22
SVIP-205ENST00000533774 ARF4P18085 180 aaPredicted RBP13.69□□□□□ -0.22
SVIP-205ENST00000533774 GNA11P29992 359 aa13.69□□□□□ -0.22
SVIP-205ENST00000533774 PTENP60484 403 aa13.69□□□□□ -0.22
SVIP-205ENST00000533774 GRIK3Q13003 919 aa13.69□□□□□ -0.22
SVIP-205ENST00000533774 NOTUMQ6P988 496 aa13.69□□□□□ -0.22
SVIP-205ENST00000533774 FAM160A2Q8N612 972 aaPredicted RBP13.69□□□□□ -0.22
SVIP-205ENST00000533774 TBCKQ8TEA7 893 aa13.69□□□□□ -0.22
SVIP-205ENST00000533774 DNASE1L2Q92874 299 aa13.69□□□□□ -0.22
SVIP-205ENST00000533774 ELSPBP1Q96BH3 223 aa13.69□□□□□ -0.22
SVIP-205ENST00000533774 TCEAL4Q96EI5 215 aa13.69□□□□□ -0.22
SVIP-205ENST00000533774 CEP170P1Q96L14 293 aa13.69□□□□□ -0.22
SVIP-205ENST00000533774 JPH2Q9BR39 696 aaPredicted RBP13.69□□□□□ -0.22
SVIP-205ENST00000533774 XPNPEP1Q9NQW7 623 aa13.69□□□□□ -0.22
SVIP-205ENST00000533774 VPS54Q9P1Q0 977 aa13.69□□□□□ -0.22
SVIP-205ENST00000533774 ZMIZ1Q9ULJ6 1067 aa13.69□□□□□ -0.22
SVIP-205ENST00000533774 MRPS23Q9Y3D9 190 aaKnown RBP13.69□□□□□ -0.22
SVIP-205ENST00000533774 NUP205Q92621 2012 aa13.69□□□□□ -0.22
SVIP-205ENST00000533774 NBEAQ8NFP9 2946 aa13.68□□□□□ -0.22
SVIP-205ENST00000533774 CYP3A7-CYP3A51PA0A087WV96 503 aa13.68□□□□□ -0.22
SVIP-205ENST00000533774 NPTXRO95502 500 aa13.68□□□□□ -0.22
SVIP-205ENST00000533774 CYP3A7P24462 503 aa13.68□□□□□ -0.22
SVIP-205ENST00000533774 AXLP30530 894 aa13.68□□□□□ -0.22
SVIP-205ENST00000533774 OR1D2P34982 312 aa13.68□□□□□ -0.22
SVIP-205ENST00000533774 CXCL12P48061 93 aa13.68□□□□□ -0.22
SVIP-205ENST00000533774 CCR3P51677 355 aa13.68□□□□□ -0.22
SVIP-205ENST00000533774 LIMK1P53667 647 aa13.68□□□□□ -0.22
SVIP-205ENST00000533774 MBTD1Q05BQ5 628 aa13.68□□□□□ -0.22
SVIP-205ENST00000533774 RAB33AQ14088 237 aa13.68□□□□□ -0.22
SVIP-205ENST00000533774 EMC2Q15006 297 aa13.68□□□□□ -0.22
SVIP-205ENST00000533774 ACAP1Q15027 740 aa13.68□□□□□ -0.22
SVIP-205ENST00000533774 NAB2Q15742 525 aa13.68□□□□□ -0.22
SVIP-205ENST00000533774 FAM78AQ5JUQ0 283 aa13.68□□□□□ -0.22
SVIP-205ENST00000533774 HEATR6Q6AI08 1181 aaKnown RBP13.68□□□□□ -0.22
SVIP-205ENST00000533774 IL31Q6EBC2 164 aa13.68□□□□□ -0.22
SVIP-205ENST00000533774 DHX32Q7L7V1 743 aaKnown RBP13.68□□□□□ -0.22
SVIP-205ENST00000533774 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.68□□□□□ -0.22
SVIP-205ENST00000533774 MAP4K3Q8IVH8 894 aa13.68□□□□□ -0.22
SVIP-205ENST00000533774 CCDC12Q8WUD4 166 aaPredicted RBP13.68□□□□□ -0.22
SVIP-205ENST00000533774 SLC7A3Q8WY07 619 aa13.68□□□□□ -0.22
SVIP-205ENST00000533774 FAM3CQ92520 227 aa13.68□□□□□ -0.22
SVIP-205ENST00000533774 CCDC51Q96ER9 411 aa13.68□□□□□ -0.22
SVIP-205ENST00000533774 ESYT1Q9BSJ8 1104 aa13.68□□□□□ -0.22
SVIP-205ENST00000533774 RBM12Q9NTZ6 932 aaKnown RBP13.68□□□□□ -0.22
SVIP-205ENST00000533774 GDE1Q9NZC3 331 aa13.68□□□□□ -0.22
SVIP-205ENST00000533774 DSPP15924 2871 aaKnown RBP13.67□□□□□ -0.22
SVIP-205ENST00000533774 MAN2B1O00754 1011 aa13.67□□□□□ -0.22
SVIP-205ENST00000533774 PTGESO14684 152 aa13.67□□□□□ -0.22
SVIP-205ENST00000533774 CPA1P15085 419 aa13.67□□□□□ -0.22
SVIP-205ENST00000533774 CCR2P41597 374 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms