RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 RBAKQ9NYW8 714 aaPredicted RBP12.95□□□□□ -0.34
COMMD9-208ENST00000533643 LRFN2Q9ULH4 789 aa12.95□□□□□ -0.34
COMMD9-208ENST00000533643 CEP290O15078 2479 aa12.94□□□□□ -0.34
COMMD9-208ENST00000533643 ARL5CA6NH57 179 aa12.94□□□□□ -0.34
COMMD9-208ENST00000533643 OFD1O75665 1012 aa12.94□□□□□ -0.34
COMMD9-208ENST00000533643 UPP2O95045 317 aa12.94□□□□□ -0.34
COMMD9-208ENST00000533643 IL18RAPO95256 599 aa12.94□□□□□ -0.34
COMMD9-208ENST00000533643 GNA14O95837 355 aa12.94□□□□□ -0.34
COMMD9-208ENST00000533643 FGFR1P11362 822 aa12.94□□□□□ -0.34
COMMD9-208ENST00000533643 ZNF18P17022 549 aa12.94□□□□□ -0.34
COMMD9-208ENST00000533643 KCNJ6P48051 423 aa12.94□□□□□ -0.34
COMMD9-208ENST00000533643 GATMP50440 423 aa12.94□□□□□ -0.34
COMMD9-208ENST00000533643 AFF1P51825 1210 aaKnown RBP12.94□□□□□ -0.34
COMMD9-208ENST00000533643 YARSP54577 528 aaKnown RBP12.94□□□□□ -0.34
COMMD9-208ENST00000533643 MARSP56192 900 aaKnown RBP12.94□□□□□ -0.34
COMMD9-208ENST00000533643 PSMD6Q15008 389 aa12.94□□□□□ -0.34
COMMD9-208ENST00000533643 CCDC40Q4G0X9 1142 aa12.94□□□□□ -0.34
COMMD9-208ENST00000533643 XKR4Q5GH76 650 aa12.94□□□□□ -0.34
COMMD9-208ENST00000533643 C9orf50Q5SZB4 431 aa12.94□□□□□ -0.34
COMMD9-208ENST00000533643 C1orf220Q5T0J3 134 aa12.94□□□□□ -0.34
COMMD9-208ENST00000533643 TMCO2Q7Z6W1 182 aaPredicted RBP12.94□□□□□ -0.34
COMMD9-208ENST00000533643 RNF214Q8ND24 703 aa12.94□□□□□ -0.34
COMMD9-208ENST00000533643 TMC2Q8TDI7 906 aa12.94□□□□□ -0.34
COMMD9-208ENST00000533643 PARD3BQ8TEW8 1205 aa12.94□□□□□ -0.34
COMMD9-208ENST00000533643 CNOT6LQ96LI5 555 aaKnown RBP12.94□□□□□ -0.34
COMMD9-208ENST00000533643 ZFP42Q96MM3 310 aa12.94□□□□□ -0.34
COMMD9-208ENST00000533643 GAD1Q99259 594 aa12.94□□□□□ -0.34
COMMD9-208ENST00000533643 RBSNQ9H1K0 784 aa12.94□□□□□ -0.34
COMMD9-208ENST00000533643 RSAD1Q9HA92 442 aa12.94□□□□□ -0.34
COMMD9-208ENST00000533643 PDE11AQ9HCR9 933 aa12.94□□□□□ -0.34
COMMD9-208ENST00000533643 TOPORSQ9NS56 1045 aaPredicted RBP12.94□□□□□ -0.34
COMMD9-208ENST00000533643 ARMCX3Q9UH62 379 aaPredicted RBP12.94□□□□□ -0.34
COMMD9-208ENST00000533643 MICAL3Q7RTP6 2002 aa12.93□□□□□ -0.34
COMMD9-208ENST00000533643 KCNJ18B7U540 433 aa12.93□□□□□ -0.34
COMMD9-208ENST00000533643 PTGESO14684 152 aa12.93□□□□□ -0.34
COMMD9-208ENST00000533643 INPPL1O15357 1258 aa12.93□□□□□ -0.34
COMMD9-208ENST00000533643 KRT13P13646 458 aa12.93□□□□□ -0.34
COMMD9-208ENST00000533643 MLH1P40692 756 aa12.93□□□□□ -0.34
COMMD9-208ENST00000533643 MLLT1Q03111 559 aaPredicted RBP12.93□□□□□ -0.34
COMMD9-208ENST00000533643 PPP2R3AQ06190 1150 aa12.93□□□□□ -0.34
COMMD9-208ENST00000533643 KCNJ12Q14500 433 aa12.93□□□□□ -0.34
COMMD9-208ENST00000533643 SHHQ15465 462 aa12.93□□□□□ -0.34
COMMD9-208ENST00000533643 TCP11X2Q5H9J9 407 aa12.93□□□□□ -0.34
COMMD9-208ENST00000533643 GLB1LQ6UWU2 654 aa12.93□□□□□ -0.34
COMMD9-208ENST00000533643 INTS8Q75QN2 995 aaKnown RBP12.93□□□□□ -0.34
COMMD9-208ENST00000533643 FAM114A1Q8IWE2 563 aa12.93□□□□□ -0.34
COMMD9-208ENST00000533643 TRIM59Q8IWR1 403 aa12.93□□□□□ -0.34
COMMD9-208ENST00000533643 CD302Q8IX05 232 aa12.93□□□□□ -0.34
COMMD9-208ENST00000533643 GSTCDQ8NEC7 633 aa12.93□□□□□ -0.34
COMMD9-208ENST00000533643 HELQQ8TDG4 1101 aa12.93□□□□□ -0.34
COMMD9-208ENST00000533643 CCDC127Q96BQ5 260 aa12.93□□□□□ -0.34
COMMD9-208ENST00000533643 FAM84AQ96KN4 292 aa12.93□□□□□ -0.34
COMMD9-208ENST00000533643 ZMAT2Q96NC0 199 aaKnown RBP12.93□□□□□ -0.34
COMMD9-208ENST00000533643 CASD1Q96PB1 797 aa12.93□□□□□ -0.34
COMMD9-208ENST00000533643 POP1Q99575 1024 aaKnown RBP12.93□□□□□ -0.34
COMMD9-208ENST00000533643 UBE2OQ9C0C9 1292 aaKnown RBP12.93□□□□□ -0.34
COMMD9-208ENST00000533643 METTL14Q9HCE5 456 aaKnown RBP12.93□□□□□ -0.34
COMMD9-208ENST00000533643 MIOSQ9NXC5 875 aa12.93□□□□□ -0.34
COMMD9-208ENST00000533643 CNTN3Q9P232 1028 aa12.93□□□□□ -0.34
COMMD9-208ENST00000533643 SLC4A7Q9Y6M7 1214 aa12.93□□□□□ -0.34
COMMD9-208ENST00000533643 TTC3P53804 2025 aa12.93□□□□□ -0.34
COMMD9-208ENST00000533643 PTPRJQ12913 1337 aa12.92□□□□□ -0.34
COMMD9-208ENST00000533643 SMIM28A0A1B0GU29 152 aa12.92□□□□□ -0.34
COMMD9-208ENST00000533643 LRRIQ3A6PVS8 624 aaPredicted RBP12.92□□□□□ -0.34
COMMD9-208ENST00000533643 TULP1O00294 542 aaPredicted RBP12.92□□□□□ -0.34
COMMD9-208ENST00000533643 HOXA2O43364 376 aa12.92□□□□□ -0.34
COMMD9-208ENST00000533643 DGKIO75912 1065 aa12.92□□□□□ -0.34
COMMD9-208ENST00000533643 NFICP08651 508 aa12.92□□□□□ -0.34
COMMD9-208ENST00000533643 TRIM49P0CI25 452 aa12.92□□□□□ -0.34
COMMD9-208ENST00000533643 TRIM49CP0CI26 452 aa12.92□□□□□ -0.34
COMMD9-208ENST00000533643 DLATP10515 647 aaKnown RBP12.92□□□□□ -0.34
COMMD9-208ENST00000533643 ATP1A3P13637 1013 aa12.92□□□□□ -0.34
COMMD9-208ENST00000533643 KCNE1P15382 129 aa12.92□□□□□ -0.34
COMMD9-208ENST00000533643 SCNN1GP51170 649 aa12.92□□□□□ -0.34
COMMD9-208ENST00000533643 VAMP7P51809 220 aa12.92□□□□□ -0.34
COMMD9-208ENST00000533643 DLG4P78352 724 aa12.92□□□□□ -0.34
COMMD9-208ENST00000533643 CLDN10P78369 228 aa12.92□□□□□ -0.34
COMMD9-208ENST00000533643 ENPEPQ07075 957 aa12.92□□□□□ -0.34
COMMD9-208ENST00000533643 SPAG1Q07617 926 aa12.92□□□□□ -0.34
COMMD9-208ENST00000533643 BFSP1Q12934 665 aa12.92□□□□□ -0.34
COMMD9-208ENST00000533643 SURF1Q15526 300 aa12.92□□□□□ -0.34
COMMD9-208ENST00000533643 NOMO2Q5JPE7 1267 aa12.92□□□□□ -0.34
COMMD9-208ENST00000533643 JADE1Q6IE81 842 aa12.92□□□□□ -0.34
COMMD9-208ENST00000533643 FAM117BQ6P1L5 589 aa12.92□□□□□ -0.34
COMMD9-208ENST00000533643 CREBRFQ8IUR6 639 aa12.92□□□□□ -0.34
COMMD9-208ENST00000533643 EFCAB13Q8IY85 973 aa12.92□□□□□ -0.34
COMMD9-208ENST00000533643 CGRRF1Q99675 332 aa12.92□□□□□ -0.34
COMMD9-208ENST00000533643 TMEM117Q9H0C3 514 aa12.92□□□□□ -0.34
COMMD9-208ENST00000533643 MTIF3Q9H2K0 278 aaKnown RBP12.92□□□□□ -0.34
COMMD9-208ENST00000533643 ASB7Q9H672 318 aa12.92□□□□□ -0.34
COMMD9-208ENST00000533643 MAGEC2Q9UBF1 373 aaPredicted RBP12.92□□□□□ -0.34
COMMD9-208ENST00000533643 PLAGL2Q9UPG8 496 aa12.92□□□□□ -0.34
COMMD9-208ENST00000533643 INPP5FQ9Y2H2 1132 aa12.92□□□□□ -0.34
COMMD9-208ENST00000533643 GOLGA6L19H0YKK7 550 aa12.91□□□□□ -0.34
COMMD9-208ENST00000533643 POMCP01189 267 aa12.91□□□□□ -0.34
COMMD9-208ENST00000533643 CDK11BP21127 795 aaKnown RBP12.91□□□□□ -0.34
COMMD9-208ENST00000533643 EEF1GP26641 437 aaKnown RBP12.91□□□□□ -0.34
COMMD9-208ENST00000533643 BMP8BP34820 402 aa12.91□□□□□ -0.34
COMMD9-208ENST00000533643 MTIF2P46199 727 aaKnown RBP12.91□□□□□ -0.34
COMMD9-208ENST00000533643 TMEM132DQ14C87 1099 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms