RNA–Protein interactions for RNA: ENST00000533523.5

CHMP4A-207, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best)

Gene CHMP4A, Length 1,266 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-207ENST00000533523 BTBD18B2RXH4 712 aa17.39■□□□□ 0.37
CHMP4A-207ENST00000533523 NEMFO60524 1076 aa17.39■□□□□ 0.37
CHMP4A-207ENST00000533523 TADA2AO75478 443 aa17.39■□□□□ 0.37
CHMP4A-207ENST00000533523 LYPLA2O95372 231 aa17.39■□□□□ 0.37
CHMP4A-207ENST00000533523 DCNP07585 359 aaKnown RBP17.39■□□□□ 0.37
CHMP4A-207ENST00000533523 ARL2P36404 184 aa17.39■□□□□ 0.37
CHMP4A-207ENST00000533523 RARRES1P49788 294 aa17.39■□□□□ 0.37
CHMP4A-207ENST00000533523 POU5F1BQ06416 359 aa17.39■□□□□ 0.37
CHMP4A-207ENST00000533523 HTR4Q13639 388 aa17.39■□□□□ 0.37
CHMP4A-207ENST00000533523 HSP90AA2PQ14568 343 aaPredicted RBP17.39■□□□□ 0.37
CHMP4A-207ENST00000533523 TMEM132AQ24JP5 1023 aa17.39■□□□□ 0.37
CHMP4A-207ENST00000533523 LIN9Q5TKA1 542 aa17.39■□□□□ 0.37
CHMP4A-207ENST00000533523 MAEAQ7L5Y9 396 aa17.39■□□□□ 0.37
CHMP4A-207ENST00000533523 DGLUCYQ7Z3D6 616 aa17.39■□□□□ 0.37
CHMP4A-207ENST00000533523 GSTCDQ8NEC7 633 aa17.39■□□□□ 0.37
CHMP4A-207ENST00000533523 PIGOQ8TEQ8 1089 aa17.39■□□□□ 0.37
CHMP4A-207ENST00000533523 NFKBIZQ9BYH8 718 aa17.39■□□□□ 0.37
CHMP4A-207ENST00000533523 DLL3Q9NYJ7 618 aa17.39■□□□□ 0.37
CHMP4A-207ENST00000533523 PCDHA12Q9UN75 941 aa17.39■□□□□ 0.37
CHMP4A-207ENST00000533523 NUMBLQ9Y6R0 609 aa17.39■□□□□ 0.37
CHMP4A-207ENST00000533523 CITO14578 2027 aa17.38■□□□□ 0.37
CHMP4A-207ENST00000533523 LAMP2P13473 410 aa17.38■□□□□ 0.37
CHMP4A-207ENST00000533523 FSHRP23945 695 aa17.38■□□□□ 0.37
CHMP4A-207ENST00000533523 RTP2Q5QGT7 225 aa17.38■□□□□ 0.37
CHMP4A-207ENST00000533523 CEP57Q86XR8 500 aa17.38■□□□□ 0.37
CHMP4A-207ENST00000533523 PAAF1Q9BRP4 392 aa17.38■□□□□ 0.37
CHMP4A-207ENST00000533523 TTC12Q9H892 705 aaPredicted RBP17.38■□□□□ 0.37
CHMP4A-207ENST00000533523 GPRC5CQ9NQ84 441 aa17.38■□□□□ 0.37
CHMP4A-207ENST00000533523 DLGAP2Q9P1A6 1054 aa17.38■□□□□ 0.37
CHMP4A-207ENST00000533523 FBXW11Q9UKB1 542 aa17.38■□□□□ 0.37
CHMP4A-207ENST00000533523 A0A087WWV3 80 aa17.37■□□□□ 0.37
CHMP4A-207ENST00000533523 POTEMA6NI47 508 aa17.37■□□□□ 0.37
CHMP4A-207ENST00000533523 ZMYND10O75800 440 aa17.37■□□□□ 0.37
CHMP4A-207ENST00000533523 KIF4AO95239 1232 aa17.37■□□□□ 0.37
CHMP4A-207ENST00000533523 GJB2P29033 226 aa17.37■□□□□ 0.37
CHMP4A-207ENST00000533523 TXKP42681 527 aa17.37■□□□□ 0.37
CHMP4A-207ENST00000533523 TUSC3Q13454 348 aa17.37■□□□□ 0.37
CHMP4A-207ENST00000533523 GNL2Q13823 731 aaKnown RBP17.37■□□□□ 0.37
CHMP4A-207ENST00000533523 PSMD5Q16401 504 aa17.37■□□□□ 0.37
CHMP4A-207ENST00000533523 POTEGQ6S5H5 508 aa17.37■□□□□ 0.37
CHMP4A-207ENST00000533523 ZBTB8OSQ8IWT0 167 aa17.37■□□□□ 0.37
CHMP4A-207ENST00000533523 GPR65Q8IYL9 337 aa17.37■□□□□ 0.37
CHMP4A-207ENST00000533523 FBXO18Q8NFZ0 1043 aa17.37■□□□□ 0.37
CHMP4A-207ENST00000533523 HSD17B14Q9BPX1 270 aa17.37■□□□□ 0.37
CHMP4A-207ENST00000533523 HINFPQ9BQA5 517 aa17.37■□□□□ 0.37
CHMP4A-207ENST00000533523 FOXP1Q9H334 677 aaPredicted RBP17.37■□□□□ 0.37
CHMP4A-207ENST00000533523 A0A1B0GUA9 196 aa17.36■□□□□ 0.37
CHMP4A-207ENST00000533523 ANHXE9PGG2 379 aa17.36■□□□□ 0.37
CHMP4A-207ENST00000533523 PAPLNO95428 1278 aa17.36■□□□□ 0.37
CHMP4A-207ENST00000533523 C1RP00736 705 aa17.36■□□□□ 0.37
CHMP4A-207ENST00000533523 LMNAP02545 664 aaKnown RBP17.36■□□□□ 0.37
CHMP4A-207ENST00000533523 LIG1P18858 919 aa17.36■□□□□ 0.37
CHMP4A-207ENST00000533523 NTHL1P78549 312 aa17.36■□□□□ 0.37
CHMP4A-207ENST00000533523 GUCY1B3Q02153 619 aa17.36■□□□□ 0.37
CHMP4A-207ENST00000533523 LILRA6Q6PI73 481 aa17.36■□□□□ 0.37
CHMP4A-207ENST00000533523 DCLRE1AQ6PJP8 1040 aa17.36■□□□□ 0.37
CHMP4A-207ENST00000533523 GRASPQ7Z6J2 395 aaPredicted RBP17.36■□□□□ 0.37
CHMP4A-207ENST00000533523 TTPALQ9BTX7 342 aa17.36■□□□□ 0.37
CHMP4A-207ENST00000533523 FOXQ1Q9C009 403 aa17.36■□□□□ 0.37
CHMP4A-207ENST00000533523 PRMT7Q9NVM4 692 aaPredicted RBP17.36■□□□□ 0.37
CHMP4A-207ENST00000533523 POLIQ9UNA4 740 aa17.36■□□□□ 0.37
CHMP4A-207ENST00000533523 SIT1Q9Y3P8 196 aa17.36■□□□□ 0.37
CHMP4A-207ENST00000533523 F5P12259 2224 aa17.36■□□□□ 0.37
CHMP4A-207ENST00000533523 WNT7AO00755 349 aa17.35■□□□□ 0.37
CHMP4A-207ENST00000533523 N4BP3O15049 544 aa17.35■□□□□ 0.37
CHMP4A-207ENST00000533523 CCL16O15467 120 aa17.35■□□□□ 0.37
CHMP4A-207ENST00000533523 RECQL4O94761 1208 aa17.35■□□□□ 0.37
CHMP4A-207ENST00000533523 C8AP07357 584 aa17.35■□□□□ 0.37
CHMP4A-207ENST00000533523 GLULP15104 373 aa17.35■□□□□ 0.37
CHMP4A-207ENST00000533523 DDIT3P35638 169 aa17.35■□□□□ 0.37
CHMP4A-207ENST00000533523 ORC2Q13416 577 aaPredicted RBP17.35■□□□□ 0.37
CHMP4A-207ENST00000533523 PPM1LQ5SGD2 360 aa17.35■□□□□ 0.37
CHMP4A-207ENST00000533523 FAM171A1Q5VUB5 890 aa17.35■□□□□ 0.37
CHMP4A-207ENST00000533523 CDCA2Q69YH5 1023 aaPredicted RBP17.35■□□□□ 0.37
CHMP4A-207ENST00000533523 PHLDB3Q6NSJ2 640 aa17.35■□□□□ 0.37
CHMP4A-207ENST00000533523 ZC3H14Q6PJT7 736 aaKnown RBP17.35■□□□□ 0.37
CHMP4A-207ENST00000533523 PPP4R3CPQ6ZMV5 832 aa17.35■□□□□ 0.37
CHMP4A-207ENST00000533523 MAML2Q8IZL2 1156 aaPredicted RBP17.35■□□□□ 0.37
CHMP4A-207ENST00000533523 MCPH1Q8NEM0 835 aa17.35■□□□□ 0.37
CHMP4A-207ENST00000533523 PJA1Q8NG27 643 aa17.35■□□□□ 0.37
CHMP4A-207ENST00000533523 PIK3R5Q8WYR1 880 aa17.35■□□□□ 0.37
CHMP4A-207ENST00000533523 PRIMPOLQ96LW4 560 aa17.35■□□□□ 0.37
CHMP4A-207ENST00000533523 PDZD7Q9H5P4 517 aa17.35■□□□□ 0.37
CHMP4A-207ENST00000533523 SLC2A4RGQ9NR83 387 aa17.35■□□□□ 0.37
CHMP4A-207ENST00000533523 SNTG2Q9NY99 539 aa17.35■□□□□ 0.37
CHMP4A-207ENST00000533523 TTLL13PA6NNM8 815 aa17.34■□□□□ 0.37
CHMP4A-207ENST00000533523 XYLBO75191 536 aa17.34■□□□□ 0.37
CHMP4A-207ENST00000533523 PRKCBP05771 671 aa17.34■□□□□ 0.37
CHMP4A-207ENST00000533523 HNRNPA1P09651 372 aaKnown RBP eCLIP17.34■□□□□ 0.37
CHMP4A-207ENST00000533523 LAMA1P25391 3075 aa17.34■□□□□ 0.37
CHMP4A-207ENST00000533523 MYH11P35749 1972 aa17.34■□□□□ 0.37
CHMP4A-207ENST00000533523 SUMF1Q8NBK3 374 aa17.34■□□□□ 0.37
CHMP4A-207ENST00000533523 FGF14Q92915 247 aa17.34■□□□□ 0.37
CHMP4A-207ENST00000533523 CEP295Q9C0D2 2601 aa17.34■□□□□ 0.37
CHMP4A-207ENST00000533523 SEMA4AQ9H3S1 761 aa17.34■□□□□ 0.37
CHMP4A-207ENST00000533523 CDH7Q9ULB5 785 aa17.34■□□□□ 0.37
CHMP4A-207ENST00000533523 NOL7Q9UMY1 257 aaKnown RBP17.34■□□□□ 0.37
CHMP4A-207ENST00000533523 ZFP37Q9Y6Q3 630 aaPredicted RBP17.34■□□□□ 0.37
CHMP4A-207ENST00000533523 PDCD11Q14690 1871 aaKnown RBP17.33■□□□□ 0.37
CHMP4A-207ENST00000533523 PTGESO14684 152 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms