RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 GRAP2O75791 330 aa12.99□□□□□ -0.33
BDNF-218ENST00000533246 TJP3O95049 919 aa12.99□□□□□ -0.33
BDNF-218ENST00000533246 GGPS1O95749 300 aa12.99□□□□□ -0.33
BDNF-218ENST00000533246 LDHAP00338 332 aaKnown RBP12.99□□□□□ -0.33
BDNF-218ENST00000533246 GJA8P48165 433 aa12.99□□□□□ -0.33
BDNF-218ENST00000533246 PPP2R2AP63151 447 aa12.99□□□□□ -0.33
BDNF-218ENST00000533246 KCNA1Q09470 495 aa12.99□□□□□ -0.33
BDNF-218ENST00000533246 MUM1Q2TAK8 710 aa12.99□□□□□ -0.33
BDNF-218ENST00000533246 Q4G0T1 1027 aa12.99□□□□□ -0.33
BDNF-218ENST00000533246 CENPUQ71F23 418 aa12.99□□□□□ -0.33
BDNF-218ENST00000533246 GPD1LQ8N335 351 aa12.99□□□□□ -0.33
BDNF-218ENST00000533246 PPP4R1Q8TF05 950 aa12.99□□□□□ -0.33
BDNF-218ENST00000533246 C17orf50Q8WW18 174 aa12.99□□□□□ -0.33
BDNF-218ENST00000533246 CCT6BQ92526 530 aa12.99□□□□□ -0.33
BDNF-218ENST00000533246 ACSF2Q96CM8 615 aaPredicted RBP12.99□□□□□ -0.33
BDNF-218ENST00000533246 L1RE1Q9UN81 338 aa12.99□□□□□ -0.33
BDNF-218ENST00000533246 AFG3L2Q9Y4W6 797 aa12.99□□□□□ -0.33
BDNF-218ENST00000533246 NFIBO00712 420 aa12.98□□□□□ -0.33
BDNF-218ENST00000533246 GIPC1O14908 333 aa12.98□□□□□ -0.33
BDNF-218ENST00000533246 WEE2P0C1S8 567 aa12.98□□□□□ -0.33
BDNF-218ENST00000533246 GRAMD4Q6IC98 578 aa12.98□□□□□ -0.33
BDNF-218ENST00000533246 HACE1Q8IYU2 909 aa12.98□□□□□ -0.33
BDNF-218ENST00000533246 MSL3Q8N5Y2 521 aaKnown RBP12.98□□□□□ -0.33
BDNF-218ENST00000533246 SPATA33Q96N06 139 aa12.98□□□□□ -0.33
BDNF-218ENST00000533246 PNMA5Q96PV4 448 aa12.98□□□□□ -0.33
BDNF-218ENST00000533246 MXRA8Q9BRK3 442 aa12.98□□□□□ -0.33
BDNF-218ENST00000533246 RIOX1Q9H6W3 641 aa12.98□□□□□ -0.33
BDNF-218ENST00000533246 PFDN4Q9NQP4 134 aa12.98□□□□□ -0.33
BDNF-218ENST00000533246 UBE4BO95155 1302 aa12.98□□□□□ -0.33
BDNF-218ENST00000533246 DPEP1P16444 411 aa12.98□□□□□ -0.33
BDNF-218ENST00000533246 PON1P27169 355 aa12.98□□□□□ -0.33
BDNF-218ENST00000533246 ARL4AP40617 200 aa12.98□□□□□ -0.33
BDNF-218ENST00000533246 SH3BGRP55822 239 aaPredicted RBP12.98□□□□□ -0.33
BDNF-218ENST00000533246 KRT17Q04695 432 aa12.98□□□□□ -0.33
BDNF-218ENST00000533246 GIT2Q14161 759 aa12.98□□□□□ -0.33
BDNF-218ENST00000533246 HIPK4Q8NE63 616 aa12.98□□□□□ -0.33
BDNF-218ENST00000533246 RMDN2Q96LZ7 410 aa12.98□□□□□ -0.33
BDNF-218ENST00000533246 DNAJC7Q99615 494 aa12.98□□□□□ -0.33
BDNF-218ENST00000533246 TNS2Q63HR2 1409 aa12.98□□□□□ -0.33
BDNF-218ENST00000533246 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.98□□□□□ -0.33
BDNF-218ENST00000533246 MED7O43513 233 aa12.98□□□□□ -0.33
BDNF-218ENST00000533246 DNAJC8O75937 253 aaPredicted RBP12.98□□□□□ -0.33
BDNF-218ENST00000533246 OSBPP22059 807 aa12.98□□□□□ -0.33
BDNF-218ENST00000533246 SHMT1P34896 483 aa12.98□□□□□ -0.33
BDNF-218ENST00000533246 MDM2Q00987 491 aaPredicted RBP12.98□□□□□ -0.33
BDNF-218ENST00000533246 TMEM62Q0P6H9 643 aa12.98□□□□□ -0.33
BDNF-218ENST00000533246 TMEM110Q86TL2 294 aa12.98□□□□□ -0.33
BDNF-218ENST00000533246 ANKMY2Q8IV38 441 aa12.98□□□□□ -0.33
BDNF-218ENST00000533246 ZBED8Q8IZ13 594 aa12.98□□□□□ -0.33
BDNF-218ENST00000533246 DAGLBQ8NCG7 672 aa12.98□□□□□ -0.33
BDNF-218ENST00000533246 MAML1Q92585 1016 aa12.98□□□□□ -0.33
BDNF-218ENST00000533246 FAF2Q96CS3 445 aa12.98□□□□□ -0.33
BDNF-218ENST00000533246 TEX13BQ9BXU2 312 aa12.98□□□□□ -0.33
BDNF-218ENST00000533246 CNOT10Q9H9A5 744 aaKnown RBP12.98□□□□□ -0.33
BDNF-218ENST00000533246 SCINQ9Y6U3 715 aa12.98□□□□□ -0.33
BDNF-218ENST00000533246 KIF20BQ96Q89 1820 aa12.98□□□□□ -0.33
BDNF-218ENST00000533246 TARSL2A2RTX5 802 aaKnown RBP12.97□□□□□ -0.33
BDNF-218ENST00000533246 TBX3O15119 743 aa12.97□□□□□ -0.33
BDNF-218ENST00000533246 DIAPH2O60879 1101 aa12.97□□□□□ -0.33
BDNF-218ENST00000533246 CHRNA3P32297 505 aa12.97□□□□□ -0.33
BDNF-218ENST00000533246 KIAA1755Q5JYT7 1200 aa12.97□□□□□ -0.33
BDNF-218ENST00000533246 SPOUT1Q5T280 376 aaKnown RBP12.97□□□□□ -0.33
BDNF-218ENST00000533246 NLRP14Q86W24 1093 aa12.97□□□□□ -0.33
BDNF-218ENST00000533246 ELOA2Q8IYF1 753 aaPredicted RBP12.97□□□□□ -0.33
BDNF-218ENST00000533246 TEKT4Q8WW24 435 aa12.97□□□□□ -0.33
BDNF-218ENST00000533246 SPIRE2Q8WWL2 714 aa12.97□□□□□ -0.33
BDNF-218ENST00000533246 ARL8AQ96BM9 186 aa12.97□□□□□ -0.33
BDNF-218ENST00000533246 OSBPL1AQ9BXW6 950 aa12.97□□□□□ -0.33
BDNF-218ENST00000533246 SLC5A4Q9NY91 659 aa12.97□□□□□ -0.33
BDNF-218ENST00000533246 FOXP2O15409 715 aa12.97□□□□□ -0.33
BDNF-218ENST00000533246 PPP1R37O75864 691 aa12.97□□□□□ -0.33
BDNF-218ENST00000533246 ZFXP17010 805 aaPredicted RBP12.97□□□□□ -0.33
BDNF-218ENST00000533246 SCNN1BP51168 640 aa12.97□□□□□ -0.33
BDNF-218ENST00000533246 COG7P83436 770 aa12.97□□□□□ -0.33
BDNF-218ENST00000533246 KYNUQ16719 465 aa12.97□□□□□ -0.33
BDNF-218ENST00000533246 LONRF1Q17RB8 773 aa12.97□□□□□ -0.33
BDNF-218ENST00000533246 FAM102AQ5T9C2 384 aaPredicted RBP12.97□□□□□ -0.33
BDNF-218ENST00000533246 C4orf50Q6ZRC1 276 aa12.97□□□□□ -0.33
BDNF-218ENST00000533246 TRAPPC11Q7Z392 1133 aa12.97□□□□□ -0.33
BDNF-218ENST00000533246 ARHGAP24Q8N264 748 aa12.97□□□□□ -0.33
BDNF-218ENST00000533246 PPM1NQ8N819 430 aa12.97□□□□□ -0.33
BDNF-218ENST00000533246 MDM1Q8TC05 714 aa12.97□□□□□ -0.33
BDNF-218ENST00000533246 BLOC1S4Q9NUP1 217 aa12.97□□□□□ -0.33
BDNF-218ENST00000533246 EME2A4GXA9 379 aaPredicted RBP12.97□□□□□ -0.33
BDNF-218ENST00000533246 M0QYV0 167 aa12.97□□□□□ -0.33
BDNF-218ENST00000533246 CIITAP33076 1130 aa12.97□□□□□ -0.33
BDNF-218ENST00000533246 CTCFP49711 727 aaPredicted RBP12.97□□□□□ -0.33
BDNF-218ENST00000533246 RGS7P49802 495 aa12.97□□□□□ -0.33
BDNF-218ENST00000533246 IRAK1P51617 712 aa12.97□□□□□ -0.33
BDNF-218ENST00000533246 PDIA2Q13087 525 aaKnown RBP12.97□□□□□ -0.33
BDNF-218ENST00000533246 IZUMO3Q5VZ72 239 aa12.97□□□□□ -0.33
BDNF-218ENST00000533246 MCM8Q9UJA3 840 aa12.97□□□□□ -0.33
BDNF-218ENST00000533246 FZD1Q9UP38 647 aa12.97□□□□□ -0.33
BDNF-218ENST00000533246 MAP3K6O95382 1288 aa12.97□□□□□ -0.33
BDNF-218ENST00000533246 HOXA7P31268 230 aaPredicted RBP12.97□□□□□ -0.33
BDNF-218ENST00000533246 DUOXA2Q1HG44 320 aa12.97□□□□□ -0.33
BDNF-218ENST00000533246 C1orf228Q6PIY5 440 aa12.97□□□□□ -0.33
BDNF-218ENST00000533246 CDKL2Q92772 493 aa12.97□□□□□ -0.33
BDNF-218ENST00000533246 DTNBP1Q96EV8 351 aa12.97□□□□□ -0.33
BDNF-218ENST00000533246 SLITRK6Q9H5Y7 841 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms