RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 CES5AQ6NT32 575 aa18.23■□□□□ 0.51
PKP3-209ENST00000533069 CCDC73Q6ZRK6 1079 aa18.23■□□□□ 0.51
PKP3-209ENST00000533069 ZBTB33Q86T24 672 aa18.23■□□□□ 0.51
PKP3-209ENST00000533069 LINC00301Q8NCQ3 95 aa18.23■□□□□ 0.51
PKP3-209ENST00000533069 SLC22A17Q8WUG5 538 aa18.23■□□□□ 0.51
PKP3-209ENST00000533069 UROC1Q96N76 676 aa18.23■□□□□ 0.51
PKP3-209ENST00000533069 CLIC6Q96NY7 704 aa18.23■□□□□ 0.51
PKP3-209ENST00000533069 GBP4Q96PP9 640 aa18.23■□□□□ 0.51
PKP3-209ENST00000533069 PPP1R10Q96QC0 940 aaKnown RBP18.23■□□□□ 0.51
PKP3-209ENST00000533069 PHF7Q9BWX1 381 aaPredicted RBP18.23■□□□□ 0.51
PKP3-209ENST00000533069 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.23■□□□□ 0.51
PKP3-209ENST00000533069 NCOR1O75376 2440 aa18.22■□□□□ 0.51
PKP3-209ENST00000533069 K7ENM7 598 aa18.22■□□□□ 0.51
PKP3-209ENST00000533069 C2CD2LO14523 706 aa18.22■□□□□ 0.51
PKP3-209ENST00000533069 TRAK2O60296 914 aa18.22■□□□□ 0.51
PKP3-209ENST00000533069 YEATS4O95619 227 aa18.22■□□□□ 0.51
PKP3-209ENST00000533069 EPCAMP16422 314 aa18.22■□□□□ 0.51
PKP3-209ENST00000533069 KLRC2P26717 231 aa18.22■□□□□ 0.51
PKP3-209ENST00000533069 CLCN4P51793 760 aa18.22■□□□□ 0.51
PKP3-209ENST00000533069 MCL1Q07820 350 aa18.22■□□□□ 0.51
PKP3-209ENST00000533069 ELAVL2Q12926 359 aaKnown RBP18.22■□□□□ 0.51
PKP3-209ENST00000533069 CBX2Q14781 532 aaPredicted RBP18.22■□□□□ 0.51
PKP3-209ENST00000533069 ELMSAN1Q6PJG2 1045 aa18.22■□□□□ 0.51
PKP3-209ENST00000533069 TAS1R1Q7RTX1 841 aa18.22■□□□□ 0.51
PKP3-209ENST00000533069 CEP120Q8N960 986 aa18.22■□□□□ 0.51
PKP3-209ENST00000533069 BICD1Q96G01 975 aa18.22■□□□□ 0.51
PKP3-209ENST00000533069 NECTIN4Q96NY8 510 aa18.22■□□□□ 0.51
PKP3-209ENST00000533069 ACAP3Q96P50 834 aa18.22■□□□□ 0.51
PKP3-209ENST00000533069 GPR62Q9BZJ7 368 aa18.22■□□□□ 0.51
PKP3-209ENST00000533069 ADAM7Q9H2U9 754 aa18.22■□□□□ 0.51
PKP3-209ENST00000533069 RXFP1Q9HBX9 757 aa18.22■□□□□ 0.51
PKP3-209ENST00000533069 SLC38A7Q9NVC3 462 aa18.22■□□□□ 0.51
PKP3-209ENST00000533069 ANKFY1Q9P2R3 1169 aa18.22■□□□□ 0.51
PKP3-209ENST00000533069 ZDHHC9Q9Y397 364 aa18.22■□□□□ 0.51
PKP3-209ENST00000533069 SMIM28A0A1B0GU29 152 aa18.21■□□□□ 0.51
PKP3-209ENST00000533069 SPTLC2O15270 562 aa18.21■□□□□ 0.51
PKP3-209ENST00000533069 CLDN3O15551 220 aa18.21■□□□□ 0.51
PKP3-209ENST00000533069 PPP6R2O75170 966 aa18.21■□□□□ 0.51
PKP3-209ENST00000533069 KIF4AO95239 1232 aa18.21■□□□□ 0.51
PKP3-209ENST00000533069 C1RP00736 705 aa18.21■□□□□ 0.51
PKP3-209ENST00000533069 ALADP13716 330 aa18.21■□□□□ 0.51
PKP3-209ENST00000533069 KCNE1P15382 129 aa18.21■□□□□ 0.51
PKP3-209ENST00000533069 OSTNP61366 133 aa18.21■□□□□ 0.51
PKP3-209ENST00000533069 PKP1Q13835 747 aa18.21■□□□□ 0.51
PKP3-209ENST00000533069 GLRA4Q5JXX5 417 aa18.21■□□□□ 0.51
PKP3-209ENST00000533069 ALKAL1Q6UXT8 129 aa18.21■□□□□ 0.51
PKP3-209ENST00000533069 SV2BQ7L1I2 683 aa18.21■□□□□ 0.51
PKP3-209ENST00000533069 SNX27Q96L92 541 aa18.21■□□□□ 0.51
PKP3-209ENST00000533069 FBXL18Q96ME1 805 aa18.21■□□□□ 0.51
PKP3-209ENST00000533069 PAAF1Q9BRP4 392 aa18.21■□□□□ 0.51
PKP3-209ENST00000533069 CXCL16Q9H2A7 254 aa18.21■□□□□ 0.51
PKP3-209ENST00000533069 ZHX3Q9H4I2 956 aa18.21■□□□□ 0.51
PKP3-209ENST00000533069 SFXN1Q9H9B4 322 aa18.21■□□□□ 0.51
PKP3-209ENST00000533069 DPP7Q9UHL4 492 aa18.21■□□□□ 0.51
PKP3-209ENST00000533069 TBX20Q9UMR3 447 aa18.21■□□□□ 0.51
PKP3-209ENST00000533069 LOC730098B7Z3J9 87 aa18.2■□□□□ 0.5
PKP3-209ENST00000533069 PI4K2BG5E9Z4 385 aa18.2■□□□□ 0.5
PKP3-209ENST00000533069 TMEM189-UBE2V1I3L0A0 370 aa18.2■□□□□ 0.5
PKP3-209ENST00000533069 HNRNPDLO14979 420 aaKnown RBP18.2■□□□□ 0.5
PKP3-209ENST00000533069 TEX28O15482 410 aa18.2■□□□□ 0.5
PKP3-209ENST00000533069 PIGRP01833 764 aa18.2■□□□□ 0.5
PKP3-209ENST00000533069 HARSP12081 509 aaKnown RBP18.2■□□□□ 0.5
PKP3-209ENST00000533069 MTHFRP42898 656 aa18.2■□□□□ 0.5
PKP3-209ENST00000533069 LIG4P49917 911 aa18.2■□□□□ 0.5
PKP3-209ENST00000533069 KYAT1Q16773 422 aa18.2■□□□□ 0.5
PKP3-209ENST00000533069 RABGGTAQ92696 567 aa18.2■□□□□ 0.5
PKP3-209ENST00000533069 ZBTB45Q96K62 511 aaPredicted RBP18.2■□□□□ 0.5
PKP3-209ENST00000533069 RIPOR3Q96MK2 946 aa18.2■□□□□ 0.5
PKP3-209ENST00000533069 APOL5Q9BWW9 433 aa18.2■□□□□ 0.5
PKP3-209ENST00000533069 ST6GALNAC4Q9H4F1 302 aa18.2■□□□□ 0.5
PKP3-209ENST00000533069 CNTN3Q9P232 1028 aa18.2■□□□□ 0.5
PKP3-209ENST00000533069 FNIP2Q9P278 1114 aa18.2■□□□□ 0.5
PKP3-209ENST00000533069 CFAP45Q9UL16 551 aa18.2■□□□□ 0.5
PKP3-209ENST00000533069 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.2■□□□□ 0.5
PKP3-209ENST00000533069 GOLGA6L22H0YM25 854 aa18.19■□□□□ 0.5
PKP3-209ENST00000533069 GLUD1P00367 558 aa18.19■□□□□ 0.5
PKP3-209ENST00000533069 STAT6P42226 847 aa18.19■□□□□ 0.5
PKP3-209ENST00000533069 MATR3P43243 847 aaKnown RBP eCLIP18.19■□□□□ 0.5
PKP3-209ENST00000533069 GTF2BQ00403 316 aa18.19■□□□□ 0.5
PKP3-209ENST00000533069 PDXDC1Q6P996 788 aa18.19■□□□□ 0.5
PKP3-209ENST00000533069 DCLRE1AQ6PJP8 1040 aa18.19■□□□□ 0.5
PKP3-209ENST00000533069 MAP4K3Q8IVH8 894 aa18.19■□□□□ 0.5
PKP3-209ENST00000533069 HASPINQ8TF76 798 aa18.19■□□□□ 0.5
PKP3-209ENST00000533069 RIN2Q8WYP3 895 aaPredicted RBP18.19■□□□□ 0.5
PKP3-209ENST00000533069 KHSRPQ92945 711 aaKnown RBP eCLIP18.19■□□□□ 0.5
PKP3-209ENST00000533069 DDX27Q96GQ7 796 aaKnown RBP18.19■□□□□ 0.5
PKP3-209ENST00000533069 FIZ1Q96SL8 496 aa18.19■□□□□ 0.5
PKP3-209ENST00000533069 TTPALQ9BTX7 342 aa18.19■□□□□ 0.5
PKP3-209ENST00000533069 CACNG4Q9UBN1 327 aa18.19■□□□□ 0.5
PKP3-209ENST00000533069 SEL1LQ9UBV2 794 aa18.19■□□□□ 0.5
PKP3-209ENST00000533069 SPDYE4A6NLX3 237 aa18.18■□□□□ 0.5
PKP3-209ENST00000533069 DCXO43602 365 aa18.18■□□□□ 0.5
PKP3-209ENST00000533069 CLTAP09496 248 aa18.18■□□□□ 0.5
PKP3-209ENST00000533069 GAP43P17677 238 aa18.18■□□□□ 0.5
PKP3-209ENST00000533069 PTMSP20962 102 aa18.18■□□□□ 0.5
PKP3-209ENST00000533069 CLCNKBP51801 687 aa18.18■□□□□ 0.5
PKP3-209ENST00000533069 KRT85P78386 507 aa18.18■□□□□ 0.5
PKP3-209ENST00000533069 UPP1Q16831 310 aa18.18■□□□□ 0.5
PKP3-209ENST00000533069 RARS2Q5T160 578 aaKnown RBP18.18■□□□□ 0.5
PKP3-209ENST00000533069 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms