RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 HARSP12081 509 aaKnown RBP19.55■□□□□ 0.72
SMG1-203ENST00000532700 PLS3P13797 630 aa19.55■□□□□ 0.72
SMG1-203ENST00000532700 GRM5P41594 1212 aa19.55■□□□□ 0.72
SMG1-203ENST00000532700 MCM6Q14566 821 aa19.55■□□□□ 0.72
SMG1-203ENST00000532700 CES5AQ6NT32 575 aa19.55■□□□□ 0.72
SMG1-203ENST00000532700 ALKAL1Q6UXT8 129 aa19.55■□□□□ 0.72
SMG1-203ENST00000532700 TMEM87AQ8NBN3 555 aa19.55■□□□□ 0.72
SMG1-203ENST00000532700 ZNF707Q96C28 371 aaPredicted RBP19.55■□□□□ 0.72
SMG1-203ENST00000532700 EPSTI1Q96J88 318 aa19.55■□□□□ 0.72
SMG1-203ENST00000532700 NTPCRQ9BSD7 190 aaKnown RBP19.55■□□□□ 0.72
SMG1-203ENST00000532700 MRPL4Q9BYD3 311 aaKnown RBP19.55■□□□□ 0.72
SMG1-203ENST00000532700 SFXN1Q9H9B4 322 aa19.55■□□□□ 0.72
SMG1-203ENST00000532700 SMIM28A0A1B0GU29 152 aa19.54■□□□□ 0.72
SMG1-203ENST00000532700 TGM5O43548 720 aa19.54■□□□□ 0.72
SMG1-203ENST00000532700 TADA2AO75478 443 aa19.54■□□□□ 0.72
SMG1-203ENST00000532700 MARCKSP29966 332 aaPredicted RBP19.54■□□□□ 0.72
SMG1-203ENST00000532700 MTHFRP42898 656 aa19.54■□□□□ 0.72
SMG1-203ENST00000532700 CLCNKBP51801 687 aa19.54■□□□□ 0.72
SMG1-203ENST00000532700 PTPN21Q16825 1174 aa19.54■□□□□ 0.72
SMG1-203ENST00000532700 USP41Q3LFD5 358 aa19.54■□□□□ 0.72
SMG1-203ENST00000532700 XKR4Q5GH76 650 aa19.54■□□□□ 0.72
SMG1-203ENST00000532700 FAM171A1Q5VUB5 890 aa19.54■□□□□ 0.72
SMG1-203ENST00000532700 LILRA6Q6PI73 481 aa19.54■□□□□ 0.72
SMG1-203ENST00000532700 RSPO2Q6UXX9 243 aaPredicted RBP19.54■□□□□ 0.72
SMG1-203ENST00000532700 TRIM67Q6ZTA4 783 aa19.54■□□□□ 0.72
SMG1-203ENST00000532700 PPFIBP1Q86W92 1011 aa19.54■□□□□ 0.72
SMG1-203ENST00000532700 GPBP1Q86WP2 473 aa19.54■□□□□ 0.72
SMG1-203ENST00000532700 SPIRE2Q8WWL2 714 aa19.54■□□□□ 0.72
SMG1-203ENST00000532700 ASIC4Q96FT7 647 aa19.54■□□□□ 0.72
SMG1-203ENST00000532700 CDK5RAP3Q96JB5 506 aa19.54■□□□□ 0.72
SMG1-203ENST00000532700 SNX27Q96L92 541 aa19.54■□□□□ 0.72
SMG1-203ENST00000532700 CLIC6Q96NY7 704 aa19.54■□□□□ 0.72
SMG1-203ENST00000532700 NT5C3AQ9H0P0 336 aa19.54■□□□□ 0.72
SMG1-203ENST00000532700 FBXO2Q9UK22 296 aaPredicted RBP19.54■□□□□ 0.72
SMG1-203ENST00000532700 MTMR6Q9Y217 621 aa19.54■□□□□ 0.72
SMG1-203ENST00000532700 ANK1P16157 1881 aa19.54■□□□□ 0.72
SMG1-203ENST00000532700 PDGFBP01127 241 aaPredicted RBP19.53■□□□□ 0.72
SMG1-203ENST00000532700 ADH1AP07327 375 aa19.53■□□□□ 0.72
SMG1-203ENST00000532700 BRCC3P46736 316 aa19.53■□□□□ 0.72
SMG1-203ENST00000532700 NCKAP1LP55160 1127 aa19.53■□□□□ 0.72
SMG1-203ENST00000532700 CEBPZQ03701 1054 aaKnown RBP19.53■□□□□ 0.72
SMG1-203ENST00000532700 ZBTB41Q5SVQ8 909 aa19.53■□□□□ 0.72
SMG1-203ENST00000532700 LNX1Q8TBB1 728 aaPredicted RBP19.53■□□□□ 0.72
SMG1-203ENST00000532700 C18orf25Q96B23 403 aaPredicted RBP19.53■□□□□ 0.72
SMG1-203ENST00000532700 AK8Q96MA6 479 aa19.53■□□□□ 0.72
SMG1-203ENST00000532700 RIPOR3Q96MK2 946 aa19.53■□□□□ 0.72
SMG1-203ENST00000532700 FIZ1Q96SL8 496 aa19.53■□□□□ 0.72
SMG1-203ENST00000532700 CLSTN3Q9BQT9 956 aa19.53■□□□□ 0.72
SMG1-203ENST00000532700 IKZF4Q9H2S9 585 aa19.53■□□□□ 0.72
SMG1-203ENST00000532700 ANKFY1Q9P2R3 1169 aa19.53■□□□□ 0.72
SMG1-203ENST00000532700 DOCK8Q8NF50 2099 aa19.53■□□□□ 0.72
SMG1-203ENST00000532700 SF3B1O75533 1304 aaKnown RBP eCLIP19.52■□□□□ 0.728e-6■■■■■ 107
SMG1-203ENST00000532700 TMEM221A6NGB7 291 aa19.52■□□□□ 0.72
SMG1-203ENST00000532700 M0R296 226 aa19.52■□□□□ 0.72
SMG1-203ENST00000532700 NR1I2O75469 434 aa19.52■□□□□ 0.72
SMG1-203ENST00000532700 BRD1O95696 1058 aa19.52■□□□□ 0.72
SMG1-203ENST00000532700 GLUD1P00367 558 aa19.52■□□□□ 0.72
SMG1-203ENST00000532700 MPZL3Q6UWV2 235 aa19.52■□□□□ 0.72
SMG1-203ENST00000532700 CEP57Q86XR8 500 aa19.52■□□□□ 0.72
SMG1-203ENST00000532700 RAD54LQ92698 747 aa19.52■□□□□ 0.72
SMG1-203ENST00000532700 NECTIN4Q96NY8 510 aa19.52■□□□□ 0.72
SMG1-203ENST00000532700 STK39Q9UEW8 545 aa19.52■□□□□ 0.72
SMG1-203ENST00000532700 CCDC195A0A1B0GUA6 201 aa19.51■□□□□ 0.71
SMG1-203ENST00000532700 MCF2P10911 925 aa19.51■□□□□ 0.71
SMG1-203ENST00000532700 TKTP29401 623 aaKnown RBP19.51■□□□□ 0.71
SMG1-203ENST00000532700 LONP1P36776 959 aaKnown RBP19.51■□□□□ 0.71
SMG1-203ENST00000532700 UBA7P41226 1012 aa19.51■□□□□ 0.71
SMG1-203ENST00000532700 SPAG1Q07617 926 aa19.51■□□□□ 0.71
SMG1-203ENST00000532700 UPP1Q16831 310 aa19.51■□□□□ 0.71
SMG1-203ENST00000532700 SLC10A6Q3KNW5 377 aa19.51■□□□□ 0.71
SMG1-203ENST00000532700 ATAT1Q5SQI0 421 aa19.51■□□□□ 0.71
SMG1-203ENST00000532700 SLC39A4Q6P5W5 647 aa19.51■□□□□ 0.71
SMG1-203ENST00000532700 KREMEN2Q8NCW0 462 aa19.51■□□□□ 0.71
SMG1-203ENST00000532700 PIK3R5Q8WYR1 880 aa19.51■□□□□ 0.71
SMG1-203ENST00000532700 USP28Q96RU2 1077 aa19.51■□□□□ 0.71
SMG1-203ENST00000532700 TTPALQ9BTX7 342 aa19.51■□□□□ 0.71
SMG1-203ENST00000532700 TIPINQ9BVW5 301 aa19.51■□□□□ 0.71
SMG1-203ENST00000532700 C17orf75Q9HAS0 396 aa19.51■□□□□ 0.71
SMG1-203ENST00000532700 FNIP2Q9P278 1114 aa19.51■□□□□ 0.71
SMG1-203ENST00000532700 LIMD1Q9UGP4 676 aa19.51■□□□□ 0.71
SMG1-203ENST00000532700 RBM19Q9Y4C8 960 aaKnown RBP19.51■□□□□ 0.71
SMG1-203ENST00000532700 NOTCH4Q99466 2003 aa19.51■□□□□ 0.71
SMG1-203ENST00000532700 WDFY4Q6ZS81 3184 aa19.5■□□□□ 0.71
SMG1-203ENST00000532700 A0A087X0B3 334 aa19.5■□□□□ 0.71
SMG1-203ENST00000532700 SPDYE4A6NLX3 237 aa19.5■□□□□ 0.71
SMG1-203ENST00000532700 TISP43B9A030 160 aa19.5■□□□□ 0.71
SMG1-203ENST00000532700 K7ELQ4 463 aaPredicted RBP19.5■□□□□ 0.71
SMG1-203ENST00000532700 FAM189A1O60320 539 aa19.5■□□□□ 0.71
SMG1-203ENST00000532700 FGFR3P22607 806 aa19.5■□□□□ 0.71
SMG1-203ENST00000532700 PLA2G5P39877 138 aa19.5■□□□□ 0.71
SMG1-203ENST00000532700 TNFSF9P41273 254 aa19.5■□□□□ 0.71
SMG1-203ENST00000532700 ZNF131P52739 623 aa19.5■□□□□ 0.71
SMG1-203ENST00000532700 PSMD5Q16401 504 aa19.5■□□□□ 0.71
SMG1-203ENST00000532700 HAUS6Q7Z4H7 955 aa19.5■□□□□ 0.71
SMG1-203ENST00000532700 TDRD5Q8NAT2 981 aaKnown RBP19.5■□□□□ 0.71
SMG1-203ENST00000532700 ST13P5Q8NFI4 369 aaPredicted RBP19.5■□□□□ 0.71
SMG1-203ENST00000532700 TUBGCP4Q9UGJ1 667 aa19.5■□□□□ 0.71
SMG1-203ENST00000532700 NR2E1Q9Y466 385 aa19.5■□□□□ 0.71
SMG1-203ENST00000532700 TMEM189-UBE2V1I3L0A0 370 aa19.49■□□□□ 0.71
SMG1-203ENST00000532700 B3GAT3O94766 335 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms