RNA–Protein interactions for RNA: ENST00000532313.5

CSRP1-215, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 5,239 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-215ENST00000532313 SMIM10L2BP0DMW5 78 aa12.39□□□□□ -0.43
CSRP1-215ENST00000532313 ZNF445P59923 1031 aa12.39□□□□□ -0.43
CSRP1-215ENST00000532313 ARFGAP2Q8N6H7 521 aa12.39□□□□□ -0.43
CSRP1-215ENST00000532313 SKA2Q8WVK7 121 aaPredicted RBP12.39□□□□□ -0.43
CSRP1-215ENST00000532313 DHX38Q92620 1227 aaKnown RBP12.39□□□□□ -0.43
CSRP1-215ENST00000532313 TRIM9Q9C026 710 aa12.39□□□□□ -0.43
CSRP1-215ENST00000532313 NIF3L1Q9GZT8 377 aa12.39□□□□□ -0.43
CSRP1-215ENST00000532313 INTS2Q9H0H0 1204 aaKnown RBP12.39□□□□□ -0.43
CSRP1-215ENST00000532313 SHPRHQ149N8 1683 aa12.39□□□□□ -0.43
CSRP1-215ENST00000532313 NHSL1Q5SYE7 1610 aa12.39□□□□□ -0.43
CSRP1-215ENST00000532313 NMT1P30419 496 aaKnown RBP12.39□□□□□ -0.43
CSRP1-215ENST00000532313 KPNA2P52292 529 aaKnown RBP12.39□□□□□ -0.43
CSRP1-215ENST00000532313 MESDQ14696 234 aa12.39□□□□□ -0.43
CSRP1-215ENST00000532313 ERCC6LQ2NKX8 1250 aa12.39□□□□□ -0.43
CSRP1-215ENST00000532313 PABPC1LQ4VXU2 614 aaKnown RBP12.39□□□□□ -0.43
CSRP1-215ENST00000532313 ZNF394Q53GI3 561 aa12.39□□□□□ -0.43
CSRP1-215ENST00000532313 OLFML2BQ68BL8 750 aa12.39□□□□□ -0.43
CSRP1-215ENST00000532313 FBXL16Q8N461 479 aa12.39□□□□□ -0.43
CSRP1-215ENST00000532313 TARS2Q9BW92 718 aaKnown RBP12.39□□□□□ -0.43
CSRP1-215ENST00000532313 CELF4Q9BZC1 486 aaKnown RBP12.39□□□□□ -0.43
CSRP1-215ENST00000532313 DUOX1Q9NRD9 1551 aa12.39□□□□□ -0.43
CSRP1-215ENST00000532313 A0A087WZ62 844 aa12.39□□□□□ -0.43
CSRP1-215ENST00000532313 RFC2P35250 354 aa12.39□□□□□ -0.43
CSRP1-215ENST00000532313 PRKCZQ05513 592 aa12.39□□□□□ -0.43
CSRP1-215ENST00000532313 KCNH2Q12809 1159 aa12.39□□□□□ -0.43
CSRP1-215ENST00000532313 FDXACB1Q9BRP7 624 aaPredicted RBP12.39□□□□□ -0.43
CSRP1-215ENST00000532313 TRIM7Q9C029 511 aa12.39□□□□□ -0.43
CSRP1-215ENST00000532313 HYOU1Q9Y4L1 999 aa12.39□□□□□ -0.43
CSRP1-215ENST00000532313 SLC9A3R1O14745 358 aaPredicted RBP12.38□□□□□ -0.43
CSRP1-215ENST00000532313 GUCY2CP25092 1073 aa12.38□□□□□ -0.43
CSRP1-215ENST00000532313 CRYBB1P53674 252 aaPredicted RBP12.38□□□□□ -0.43
CSRP1-215ENST00000532313 PSMC1P62191 440 aaKnown RBP12.38□□□□□ -0.43
CSRP1-215ENST00000532313 GIT2Q14161 759 aa12.38□□□□□ -0.43
CSRP1-215ENST00000532313 EFHC1Q5JVL4 640 aa12.38□□□□□ -0.43
CSRP1-215ENST00000532313 ZPBP2Q6X784 338 aa12.38□□□□□ -0.43
CSRP1-215ENST00000532313 CATSPER3Q86XQ3 398 aa12.38□□□□□ -0.43
CSRP1-215ENST00000532313 BRI3BPQ8WY22 251 aa12.38□□□□□ -0.43
CSRP1-215ENST00000532313 SLC5A5Q92911 643 aa12.38□□□□□ -0.43
CSRP1-215ENST00000532313 ASIC4Q96FT7 647 aa12.38□□□□□ -0.43
CSRP1-215ENST00000532313 ADAM2Q99965 735 aa12.38□□□□□ -0.43
CSRP1-215ENST00000532313 TSEN34Q9BSV6 310 aaKnown RBP12.38□□□□□ -0.43
CSRP1-215ENST00000532313 ASB7Q9H672 318 aa12.38□□□□□ -0.43
CSRP1-215ENST00000532313 IL17RBQ9NRM6 502 aa12.38□□□□□ -0.43
CSRP1-215ENST00000532313 TOPAZ1Q8N9V7 1692 aa12.38□□□□□ -0.43
CSRP1-215ENST00000532313 CNTNAP2Q9UHC6 1331 aa12.38□□□□□ -0.43
CSRP1-215ENST00000532313 GTF2H1P32780 548 aa12.38□□□□□ -0.43
CSRP1-215ENST00000532313 FPGSQ05932 587 aa12.38□□□□□ -0.43
CSRP1-215ENST00000532313 PPP2R5CQ13362 524 aa12.38□□□□□ -0.43
CSRP1-215ENST00000532313 ITPRIPL1Q6GPH6 555 aa12.38□□□□□ -0.43
CSRP1-215ENST00000532313 RAB42Q8N4Z0 105 aa12.38□□□□□ -0.43
CSRP1-215ENST00000532313 SPIRE2Q8WWL2 714 aa12.38□□□□□ -0.43
CSRP1-215ENST00000532313 MRFAP1L1Q96HT8 127 aa12.38□□□□□ -0.43
CSRP1-215ENST00000532313 TMEM8AQ9HCN3 771 aa12.38□□□□□ -0.43
CSRP1-215ENST00000532313 PAMP19021 973 aa12.38□□□□□ -0.43
CSRP1-215ENST00000532313 ACOT2P49753 483 aa12.38□□□□□ -0.43
CSRP1-215ENST00000532313 TCP11X2Q5H9J9 407 aa12.38□□□□□ -0.43
CSRP1-215ENST00000532313 LRRC43Q8N309 656 aa12.38□□□□□ -0.43
CSRP1-215ENST00000532313 IFT43Q96FT9 208 aa12.38□□□□□ -0.43
CSRP1-215ENST00000532313 OXCT2Q9BYC2 517 aaPredicted RBP12.38□□□□□ -0.43
CSRP1-215ENST00000532313 IRAK4Q9NWZ3 460 aa12.38□□□□□ -0.43
CSRP1-215ENST00000532313 RGS17Q9UGC6 210 aaPredicted RBP12.38□□□□□ -0.43
CSRP1-215ENST00000532313 PCDHB5Q9Y5E4 795 aa12.38□□□□□ -0.43
CSRP1-215ENST00000532313 GMNNO75496 209 aa12.38□□□□□ -0.43
CSRP1-215ENST00000532313 CCL5P13501 91 aa12.38□□□□□ -0.43
CSRP1-215ENST00000532313 MYBPC2Q14324 1141 aa12.38□□□□□ -0.43
CSRP1-215ENST00000532313 STARD3Q14849 445 aa12.38□□□□□ -0.43
CSRP1-215ENST00000532313 AAK1Q2M2I8 961 aa12.38□□□□□ -0.43
CSRP1-215ENST00000532313 ATP6V0D2Q8N8Y2 350 aa12.38□□□□□ -0.43
CSRP1-215ENST00000532313 ZWILCHQ9H900 591 aa12.38□□□□□ -0.43
CSRP1-215ENST00000532313 NKIRAS1Q9NYS0 192 aa12.38□□□□□ -0.43
CSRP1-215ENST00000532313 MYOM1P52179 1685 aa12.38□□□□□ -0.43
CSRP1-215ENST00000532313 CAND2O75155 1236 aa12.37□□□□□ -0.43
CSRP1-215ENST00000532313 ETFBP38117 255 aa12.37□□□□□ -0.43
CSRP1-215ENST00000532313 UAP1Q16222 522 aaPredicted RBP12.37□□□□□ -0.43
CSRP1-215ENST00000532313 NBPF20Q3BBV1 942 aa12.37□□□□□ -0.43
CSRP1-215ENST00000532313 AFAP1L1Q8TED9 768 aa12.37□□□□□ -0.43
CSRP1-215ENST00000532313 SCFD1Q8WVM8 642 aa12.37□□□□□ -0.43
CSRP1-215ENST00000532313 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.37□□□□□ -0.43
CSRP1-215ENST00000532313 RNF186Q9NXI6 227 aa12.37□□□□□ -0.43
CSRP1-215ENST00000532313 MOSPD1Q9UJG1 213 aa12.37□□□□□ -0.43
CSRP1-215ENST00000532313 ITGA11Q9UKX5 1188 aa12.37□□□□□ -0.43
CSRP1-215ENST00000532313 CDY2AQ9Y6F7 541 aa12.37□□□□□ -0.43
CSRP1-215ENST00000532313 ATRNL1Q5VV63 1379 aa12.37□□□□□ -0.43
CSRP1-215ENST00000532313 LAMB3Q13751 1172 aa12.37□□□□□ -0.43
CSRP1-215ENST00000532313 C6orf163Q5TEZ5 329 aa12.37□□□□□ -0.43
CSRP1-215ENST00000532313 ENGASEQ8NFI3 743 aa12.37□□□□□ -0.43
CSRP1-215ENST00000532313 SPON2Q9BUD6 331 aa12.37□□□□□ -0.43
CSRP1-215ENST00000532313 KIFC3Q9BVG8 833 aa12.37□□□□□ -0.43
CSRP1-215ENST00000532313 SAGE1Q9NXZ1 904 aa12.37□□□□□ -0.43
CSRP1-215ENST00000532313 ABI2Q9NYB9 513 aaPredicted RBP12.37□□□□□ -0.43
CSRP1-215ENST00000532313 IP6K2Q9UHH9 426 aa12.37□□□□□ -0.43
CSRP1-215ENST00000532313 DOLKQ9UPQ8 538 aa12.37□□□□□ -0.43
CSRP1-215ENST00000532313 KDM1AO60341 852 aa12.37□□□□□ -0.43
CSRP1-215ENST00000532313 CKMP06732 381 aa12.37□□□□□ -0.43
CSRP1-215ENST00000532313 YWHAHQ04917 246 aaPredicted RBP12.37□□□□□ -0.43
CSRP1-215ENST00000532313 MTMR3Q13615 1198 aa12.37□□□□□ -0.43
CSRP1-215ENST00000532313 MORC4Q8TE76 937 aa12.37□□□□□ -0.43
CSRP1-215ENST00000532313 N4BP2L2Q92802 583 aaPredicted RBP12.37□□□□□ -0.43
CSRP1-215ENST00000532313 MAML3Q96JK9 1138 aa12.37□□□□□ -0.43
CSRP1-215ENST00000532313 KRT12Q99456 494 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms