RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-222	ENST00000531967	TMEM110	Q86TL2	294 aa		5.72	□□□□□ -1.49
ECHDC1-222	ENST00000531967	ELOA2	Q8IYF1	753 aa	Predicted RBP	5.72	□□□□□ -1.49
ECHDC1-222	ENST00000531967	ATP11C	Q8NB49	1132 aa		5.72	□□□□□ -1.49
ECHDC1-222	ENST00000531967	COG8	Q96MW5	612 aa		5.72	□□□□□ -1.49
ECHDC1-222	ENST00000531967	DACH2	Q96NX9	599 aa		5.72	□□□□□ -1.49
ECHDC1-222	ENST00000531967	ELF4	Q99607	663 aa	Predicted RBP	5.72	□□□□□ -1.49
ECHDC1-222	ENST00000531967	ZCCHC2	Q9C0B9	1178 aa	Known RBP	5.72	□□□□□ -1.49
ECHDC1-222	ENST00000531967	ZCWPW1	Q9H0M4	648 aa		5.72	□□□□□ -1.49
ECHDC1-222	ENST00000531967	TOMM22	Q9NS69	142 aa		5.72	□□□□□ -1.49
ECHDC1-222	ENST00000531967	ZNF215	Q9UL58	517 aa	Predicted RBP	5.72	□□□□□ -1.49
ECHDC1-222	ENST00000531967	KIF3A	Q9Y496	699 aa		5.72	□□□□□ -1.49
ECHDC1-222	ENST00000531967	HNRNPDL	O14979	420 aa	Known RBP	5.71	□□□□□ -1.49
ECHDC1-222	ENST00000531967	PHGDH	O43175	533 aa	Known RBP	5.71	□□□□□ -1.49
ECHDC1-222	ENST00000531967	KRT37	O76014	449 aa		5.71	□□□□□ -1.49
ECHDC1-222	ENST00000531967	PDHA1	P08559	390 aa		5.71	□□□□□ -1.49
ECHDC1-222	ENST00000531967	EDNRB	P24530	442 aa		5.71	□□□□□ -1.49
ECHDC1-222	ENST00000531967	GPC3	P51654	580 aa		5.71	□□□□□ -1.49
ECHDC1-222	ENST00000531967	SLC16A1	P53985	500 aa		5.71	□□□□□ -1.49
ECHDC1-222	ENST00000531967	EVX2	Q03828	476 aa		5.71	□□□□□ -1.49
ECHDC1-222	ENST00000531967	ACTN3	Q08043	901 aa	Predicted RBP	5.71	□□□□□ -1.49
ECHDC1-222	ENST00000531967	CCDC15	Q0P6D6	951 aa		5.71	□□□□□ -1.49
ECHDC1-222	ENST00000531967	STK4	Q13043	487 aa		5.71	□□□□□ -1.49
ECHDC1-222	ENST00000531967	SGCG	Q13326	291 aa		5.71	□□□□□ -1.49
ECHDC1-222	ENST00000531967	KYNU	Q16719	465 aa		5.71	□□□□□ -1.49
ECHDC1-222	ENST00000531967	MAJIN	Q3KP22	176 aa		5.71	□□□□□ -1.49
ECHDC1-222	ENST00000531967	ZNF687	Q8N1G0	1237 aa		5.71	□□□□□ -1.49
ECHDC1-222	ENST00000531967	ANKRD35	Q8N283	1001 aa		5.71	□□□□□ -1.49
ECHDC1-222	ENST00000531967	KREMEN2	Q8NCW0	462 aa		5.71	□□□□□ -1.49
ECHDC1-222	ENST00000531967	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	5.71	□□□□□ -1.49
ECHDC1-222	ENST00000531967	BSND	Q8WZ55	320 aa		5.71	□□□□□ -1.49
ECHDC1-222	ENST00000531967	FAM120B	Q96EK7	910 aa	Known RBP	5.71	□□□□□ -1.49
ECHDC1-222	ENST00000531967	AK8	Q96MA6	479 aa		5.71	□□□□□ -1.49
ECHDC1-222	ENST00000531967	USP26	Q9BXU7	913 aa		5.71	□□□□□ -1.49
ECHDC1-222	ENST00000531967	ARMT1	Q9H993	441 aa		5.71	□□□□□ -1.49
ECHDC1-222	ENST00000531967	DECR2	Q9NUI1	292 aa		5.71	□□□□□ -1.49
ECHDC1-222	ENST00000531967	ZNHIT6	Q9NWK9	470 aa	Known RBP	5.71	□□□□□ -1.49
ECHDC1-222	ENST00000531967	METRN	Q9UJH8	293 aa		5.71	□□□□□ -1.49
ECHDC1-222	ENST00000531967	EDAR	Q9UNE0	448 aa		5.71	□□□□□ -1.49
ECHDC1-222	ENST00000531967	CCDC154	A6NI56	674 aa		5.71	□□□□□ -1.5
ECHDC1-222	ENST00000531967	WNT7A	O00755	349 aa		5.71	□□□□□ -1.5
ECHDC1-222	ENST00000531967	SHOX	O15266	292 aa		5.71	□□□□□ -1.5
ECHDC1-222	ENST00000531967	PRPSAP2	O60256	369 aa		5.71	□□□□□ -1.5
ECHDC1-222	ENST00000531967	TSC22D2	O75157	780 aa		5.71	□□□□□ -1.5
ECHDC1-222	ENST00000531967	TBX10	O75333	385 aa		5.71	□□□□□ -1.5
ECHDC1-222	ENST00000531967	PIAS2	O75928	621 aa		5.71	□□□□□ -1.5
ECHDC1-222	ENST00000531967	RXRB	P28702	533 aa		5.71	□□□□□ -1.5
ECHDC1-222	ENST00000531967	HOXA11	P31270	313 aa	Predicted RBP	5.71	□□□□□ -1.5
ECHDC1-222	ENST00000531967	GRK4	P32298	578 aa		5.71	□□□□□ -1.5
ECHDC1-222	ENST00000531967	HSPA1L	P34931	641 aa		5.71	□□□□□ -1.5
ECHDC1-222	ENST00000531967	RGS2	P41220	211 aa		5.71	□□□□□ -1.5
ECHDC1-222	ENST00000531967	CCT4	P50991	539 aa	Known RBP	5.71	□□□□□ -1.5
ECHDC1-222	ENST00000531967	MAP2K6	P52564	334 aa		5.71	□□□□□ -1.5
ECHDC1-222	ENST00000531967	RAD23A	P54725	363 aa		5.71	□□□□□ -1.5
ECHDC1-222	ENST00000531967	TRIM32	Q13049	653 aa		5.71	□□□□□ -1.5
ECHDC1-222	ENST00000531967	CCIN	Q13939	588 aa		5.71	□□□□□ -1.5
ECHDC1-222	ENST00000531967	RABEP1	Q15276	862 aa		5.71	□□□□□ -1.5
ECHDC1-222	ENST00000531967	CNGA2	Q16280	664 aa		5.71	□□□□□ -1.5
ECHDC1-222	ENST00000531967	CEP55	Q53EZ4	464 aa		5.71	□□□□□ -1.5
ECHDC1-222	ENST00000531967	FAM47C	Q5HY64	1035 aa		5.71	□□□□□ -1.5
ECHDC1-222	ENST00000531967	CYFIP1	Q7L576	1253 aa		5.71	□□□□□ -1.5
ECHDC1-222	ENST00000531967	TTC7B	Q86TV6	843 aa		5.71	□□□□□ -1.5
ECHDC1-222	ENST00000531967	FANCB	Q8NB91	859 aa		5.71	□□□□□ -1.5
ECHDC1-222	ENST00000531967	CHST13	Q8NET6	341 aa		5.71	□□□□□ -1.5
ECHDC1-222	ENST00000531967	CTCFL	Q8NI51	663 aa	Predicted RBP	5.71	□□□□□ -1.5
ECHDC1-222	ENST00000531967	ETNPPL	Q8TBG4	499 aa		5.71	□□□□□ -1.5
ECHDC1-222	ENST00000531967	KIAA1524	Q8TCG1	905 aa		5.71	□□□□□ -1.5
ECHDC1-222	ENST00000531967	KCNG4	Q8TDN1	519 aa		5.71	□□□□□ -1.5
ECHDC1-222	ENST00000531967	GRK7	Q8WTQ7	553 aa		5.71	□□□□□ -1.5
ECHDC1-222	ENST00000531967	AFG1L	Q8WV93	481 aa		5.71	□□□□□ -1.5
ECHDC1-222	ENST00000531967	PTPN18	Q99952	460 aa		5.71	□□□□□ -1.5
ECHDC1-222	ENST00000531967	CRACR2A	Q9BSW2	395 aa		5.71	□□□□□ -1.5
ECHDC1-222	ENST00000531967	RWDD1	Q9H446	243 aa	Predicted RBP	5.71	□□□□□ -1.5
ECHDC1-222	ENST00000531967	AKAP7	Q9P0M2	348 aa	Predicted RBP	5.71	□□□□□ -1.5
ECHDC1-222	ENST00000531967	UBA2	Q9UBT2	640 aa	Predicted RBP	5.71	□□□□□ -1.5
ECHDC1-222	ENST00000531967	PCDHGC5	Q9Y5F6	944 aa		5.71	□□□□□ -1.5
ECHDC1-222	ENST00000531967	IRS2	Q9Y4H2	1338 aa		5.71	□□□□□ -1.5
ECHDC1-222	ENST00000531967	UBXN8	O00124	270 aa		5.7	□□□□□ -1.5
ECHDC1-222	ENST00000531967	SH2B2	O14492	632 aa	Predicted RBP	5.7	□□□□□ -1.5
ECHDC1-222	ENST00000531967	KIAA0355	O15063	1070 aa		5.7	□□□□□ -1.5
ECHDC1-222	ENST00000531967	ASAP2	O43150	1006 aa		5.7	□□□□□ -1.5
ECHDC1-222	ENST00000531967	RIPK2	O43353	540 aa		5.7	□□□□□ -1.5
ECHDC1-222	ENST00000531967	SYNCRIP	O60506	623 aa	Known RBP	5.7	□□□□□ -1.5
ECHDC1-222	ENST00000531967	NEMF	O60524	1076 aa		5.7	□□□□□ -1.5
ECHDC1-222	ENST00000531967	AFP	P02771	609 aa	Known RBP	5.7	□□□□□ -1.5
ECHDC1-222	ENST00000531967	HEXB	P07686	556 aa		5.7	□□□□□ -1.5
ECHDC1-222	ENST00000531967	MME	P08473	750 aa		5.7	□□□□□ -1.5
ECHDC1-222	ENST00000531967	THPO	P40225	353 aa		5.7	□□□□□ -1.5
ECHDC1-222	ENST00000531967	CCDC183	Q5T5S1	534 aa		5.7	□□□□□ -1.5
ECHDC1-222	ENST00000531967	TMEM132E	Q6IEE7	984 aa		5.7	□□□□□ -1.5
ECHDC1-222	ENST00000531967	NFRKB	Q6P4R8	1299 aa		5.7	□□□□□ -1.5
ECHDC1-222	ENST00000531967	RSPO2	Q6UXX9	243 aa	Predicted RBP	5.7	□□□□□ -1.5
ECHDC1-222	ENST00000531967	TAGAP	Q8N103	731 aa		5.7	□□□□□ -1.5
ECHDC1-222	ENST00000531967	NSUN5	Q96P11	429 aa	Known RBP	5.7	□□□□□ -1.5
ECHDC1-222	ENST00000531967	WDR24	Q96S15	920 aa		5.7	□□□□□ -1.5
ECHDC1-222	ENST00000531967	METTL22	Q9BUU2	404 aa	Predicted RBP	5.7	□□□□□ -1.5
ECHDC1-222	ENST00000531967	NCOR1P1	Q9H4R4	102 aa		5.7	□□□□□ -1.5
ECHDC1-222	ENST00000531967	THAP9	Q9H5L6	903 aa		5.7	□□□□□ -1.5
ECHDC1-222	ENST00000531967	MLXIP	Q9HAP2	919 aa		5.7	□□□□□ -1.5
ECHDC1-222	ENST00000531967	GP6	Q9HCN6	339 aa		5.7	□□□□□ -1.5
ECHDC1-222	ENST00000531967	ERVK-5	Q9HDB9	667 aa		5.7	□□□□□ -1.5

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