RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 RAB39AQ14964 217 aa3.69□□□□□ -1.82
CD44-234ENST00000531873 ZNF827Q17R98 1081 aa3.69□□□□□ -1.82
CD44-234ENST00000531873 CCDC157Q569K6 752 aa3.69□□□□□ -1.82
CD44-234ENST00000531873 TRMT10BQ6PF06 316 aaKnown RBP3.69□□□□□ -1.82
CD44-234ENST00000531873 FAM180AQ6UWF9 173 aa3.69□□□□□ -1.82
CD44-234ENST00000531873 APBB1IPQ7Z5R6 666 aaPredicted RBP3.69□□□□□ -1.82
CD44-234ENST00000531873 PPP1R3BQ86XI6 285 aa3.69□□□□□ -1.82
CD44-234ENST00000531873 TMEFF1Q8IYR6 380 aa3.69□□□□□ -1.82
CD44-234ENST00000531873 TRMT2AQ8IZ69 625 aaKnown RBP3.69□□□□□ -1.82
CD44-234ENST00000531873 PQLC1Q8N2U9 271 aa3.69□□□□□ -1.82
CD44-234ENST00000531873 REPS2Q8NFH8 660 aa3.69□□□□□ -1.82
CD44-234ENST00000531873 NUDT10Q8NFP7 164 aa3.69□□□□□ -1.82
CD44-234ENST00000531873 OR10H5Q8NGA6 315 aa3.69□□□□□ -1.82
CD44-234ENST00000531873 CXorf38Q8TB03 319 aa3.69□□□□□ -1.82
CD44-234ENST00000531873 CCHCR1Q8TD31 782 aa3.69□□□□□ -1.82
CD44-234ENST00000531873 KIAA1191Q96A73 305 aa3.69□□□□□ -1.82
CD44-234ENST00000531873 NUDT11Q96G61 164 aa3.69□□□□□ -1.82
CD44-234ENST00000531873 TMX3Q96JJ7 454 aa3.69□□□□□ -1.82
CD44-234ENST00000531873 FAM167AQ96KS9 214 aa3.69□□□□□ -1.82
CD44-234ENST00000531873 MRGPRX1Q96LB2 322 aa3.69□□□□□ -1.82
CD44-234ENST00000531873 KCNC2Q96PR1 638 aa3.69□□□□□ -1.82
CD44-234ENST00000531873 CRB3Q9BUF7 120 aa3.69□□□□□ -1.82
CD44-234ENST00000531873 SGPP1Q9BX95 441 aa3.69□□□□□ -1.82
CD44-234ENST00000531873 LRRC27Q9C0I9 530 aa3.69□□□□□ -1.82
CD44-234ENST00000531873 WDR12Q9GZL7 423 aaKnown RBP3.69□□□□□ -1.82
CD44-234ENST00000531873 KIAA1683Q9H0B3 1180 aa3.69□□□□□ -1.82
CD44-234ENST00000531873 ADAM7Q9H2U9 754 aa3.69□□□□□ -1.82
CD44-234ENST00000531873 EPB41L4BQ9H329 900 aa3.69□□□□□ -1.82
CD44-234ENST00000531873 LDAHQ9H6V9 325 aa3.69□□□□□ -1.82
CD44-234ENST00000531873 MANSC1Q9H8J5 431 aa3.69□□□□□ -1.82
CD44-234ENST00000531873 EPB41L4AQ9HCS5 686 aaPredicted RBP3.69□□□□□ -1.82
CD44-234ENST00000531873 GPRC5DQ9NZD1 345 aa3.69□□□□□ -1.82
CD44-234ENST00000531873 GPRC5BQ9NZH0 403 aa3.69□□□□□ -1.82
CD44-234ENST00000531873 CALCOCO1Q9P1Z2 691 aa3.69□□□□□ -1.82
CD44-234ENST00000531873 VWA7Q9Y334 891 aa3.69□□□□□ -1.82
CD44-234ENST00000531873 CTDP1Q9Y5B0 961 aaPredicted RBP3.69□□□□□ -1.82
CD44-234ENST00000531873 MYBBP1AQ9BQG0 1328 aaKnown RBP3.69□□□□□ -1.82
CD44-234ENST00000531873 C2orf78A6NCI8 922 aa3.68□□□□□ -1.82
CD44-234ENST00000531873 F5H423 210 aaPredicted RBP3.68□□□□□ -1.82
CD44-234ENST00000531873 F8W8V4 182 aa3.68□□□□□ -1.82
CD44-234ENST00000531873 H3BUI4 141 aa3.68□□□□□ -1.82
CD44-234ENST00000531873 TBX3O15119 743 aa3.68□□□□□ -1.82
CD44-234ENST00000531873 SEMA7AO75326 666 aa3.68□□□□□ -1.82
CD44-234ENST00000531873 GPR32O75388 356 aa3.68□□□□□ -1.82
CD44-234ENST00000531873 ITGA10O75578 1167 aa3.68□□□□□ -1.82
CD44-234ENST00000531873 ALDH1A2O94788 518 aa3.68□□□□□ -1.82
CD44-234ENST00000531873 FGAP02671 866 aa3.68□□□□□ -1.82
CD44-234ENST00000531873 KITP10721 976 aa3.68□□□□□ -1.82
CD44-234ENST00000531873 TYRP1P17643 537 aa3.68□□□□□ -1.82
CD44-234ENST00000531873 DDCP20711 480 aa3.68□□□□□ -1.82
CD44-234ENST00000531873 ABCB4P21439 1286 aa3.68□□□□□ -1.82
CD44-234ENST00000531873 CRHR1P34998 444 aa3.68□□□□□ -1.82
CD44-234ENST00000531873 WNT3AP56704 352 aa3.68□□□□□ -1.82
CD44-234ENST00000531873 ADAM8P78325 824 aa3.68□□□□□ -1.82
CD44-234ENST00000531873 ZNF543Q08ER8 600 aa3.68□□□□□ -1.82
CD44-234ENST00000531873 ADAM15Q13444 863 aa3.68□□□□□ -1.82
CD44-234ENST00000531873 NFIXQ14938 502 aa3.68□□□□□ -1.82
CD44-234ENST00000531873 PCOLCEQ15113 449 aa3.68□□□□□ -1.82
CD44-234ENST00000531873 ZRSR2Q15696 482 aaKnown RBP3.68□□□□□ -1.82
CD44-234ENST00000531873 DGKKQ5KSL6 1271 aa3.68□□□□□ -1.82
CD44-234ENST00000531873 ANO1Q5XXA6 986 aa3.68□□□□□ -1.82
CD44-234ENST00000531873 DPP9Q86TI2 863 aa3.68□□□□□ -1.82
CD44-234ENST00000531873 SESTD1Q86VW0 696 aa3.68□□□□□ -1.82
CD44-234ENST00000531873 FAM90A1Q86YD7 464 aa3.68□□□□□ -1.82
CD44-234ENST00000531873 ZDHHC14Q8IZN3 488 aa3.68□□□□□ -1.82
CD44-234ENST00000531873 SH2D3CQ8N5H7 860 aa3.68□□□□□ -1.82
CD44-234ENST00000531873 RNF152Q8N8N0 203 aa3.68□□□□□ -1.82
CD44-234ENST00000531873 FBXO18Q8NFZ0 1043 aa3.68□□□□□ -1.82
CD44-234ENST00000531873 MTFMTQ96DP5 389 aaKnown RBP3.68□□□□□ -1.82
CD44-234ENST00000531873 BORCS6Q96GS4 357 aa3.68□□□□□ -1.82
CD44-234ENST00000531873 UIMC1Q96RL1 719 aa3.68□□□□□ -1.82
CD44-234ENST00000531873 KATNBL1Q9H079 304 aa3.68□□□□□ -1.82
CD44-234ENST00000531873 ZCCHC4Q9H5U6 513 aa3.68□□□□□ -1.82
CD44-234ENST00000531873 LANCL2Q9NS86 450 aa3.68□□□□□ -1.82
CD44-234ENST00000531873 PNPOQ9NVS9 261 aa3.68□□□□□ -1.82
CD44-234ENST00000531873 SPATA6Q9NWH7 488 aaPredicted RBP3.68□□□□□ -1.82
CD44-234ENST00000531873 ING3Q9NXR8 418 aa3.68□□□□□ -1.82
CD44-234ENST00000531873 STK32BQ9NY57 414 aa3.68□□□□□ -1.82
CD44-234ENST00000531873 FEZ2Q9UHY8 353 aaPredicted RBP3.68□□□□□ -1.82
CD44-234ENST00000531873 AJAP1Q9UKB5 411 aaPredicted RBP3.68□□□□□ -1.82
CD44-234ENST00000531873 TPCN1Q9ULQ1 816 aa3.68□□□□□ -1.82
CD44-234ENST00000531873 ATRNL1Q5VV63 1379 aa3.67□□□□□ -1.82
CD44-234ENST00000531873 A0A1W2PPL8 197 aa3.67□□□□□ -1.82
CD44-234ENST00000531873 F2RL2O00254 374 aa3.67□□□□□ -1.82
CD44-234ENST00000531873 ARIH2O95376 493 aa3.67□□□□□ -1.82
CD44-234ENST00000531873 ZNF888P0CJ79 500 aaPredicted RBP3.67□□□□□ -1.82
CD44-234ENST00000531873 PRDX5P30044 214 aa3.67□□□□□ -1.82
CD44-234ENST00000531873 SLC7A1P30825 629 aa3.67□□□□□ -1.82
CD44-234ENST00000531873 IL13P35225 146 aa3.67□□□□□ -1.82
CD44-234ENST00000531873 PPM1AP35813 382 aa3.67□□□□□ -1.82
CD44-234ENST00000531873 HALP42357 657 aa3.67□□□□□ -1.82
CD44-234ENST00000531873 KIR2DL3P43628 341 aa3.67□□□□□ -1.82
CD44-234ENST00000531873 STT3AP46977 705 aa3.67□□□□□ -1.82
CD44-234ENST00000531873 MRE11P49959 708 aa3.67□□□□□ -1.82
CD44-234ENST00000531873 KRTAP1-1Q07627 177 aa3.67□□□□□ -1.82
CD44-234ENST00000531873 RAPGEF1Q13905 1077 aa3.67□□□□□ -1.82
CD44-234ENST00000531873 PRAMEF14Q5SWL7 426 aa3.67□□□□□ -1.82
CD44-234ENST00000531873 IZUMO3Q5VZ72 239 aa3.67□□□□□ -1.82
CD44-234ENST00000531873 RSPH3Q86UC2 560 aa3.67□□□□□ -1.82
CD44-234ENST00000531873 LIX1LQ8IVB5 337 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms