RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 NPTX2P47972 431 aa18.5■□□□□ 0.55
CPSF1-207ENST00000531727 PSMD5Q16401 504 aa18.5■□□□□ 0.55
CPSF1-207ENST00000531727 RILPL1Q5EBL4 403 aa18.5■□□□□ 0.55
CPSF1-207ENST00000531727 MCTP1Q6DN14 999 aa18.5■□□□□ 0.55
CPSF1-207ENST00000531727 CEP57Q86XR8 500 aa18.5■□□□□ 0.55
CPSF1-207ENST00000531727 LNX1Q8TBB1 728 aaPredicted RBP18.5■□□□□ 0.55
CPSF1-207ENST00000531727 PPP1R10Q96QC0 940 aaKnown RBP18.5■□□□□ 0.55
CPSF1-207ENST00000531727 CLSTN3Q9BQT9 956 aa18.5■□□□□ 0.55
CPSF1-207ENST00000531727 MMTAG2Q9BU76 263 aaKnown RBP18.5■□□□□ 0.55
CPSF1-207ENST00000531727 PRKD2Q9BZL6 878 aa18.5■□□□□ 0.55
CPSF1-207ENST00000531727 IRF2BPLQ9H1B7 796 aa18.5■□□□□ 0.55
CPSF1-207ENST00000531727 MFSD1Q9H3U5 465 aa18.5■□□□□ 0.55
CPSF1-207ENST00000531727 TMEM134Q9H6X4 195 aa18.5■□□□□ 0.55
CPSF1-207ENST00000531727 EPS15L1Q9UBC2 864 aa18.5■□□□□ 0.55
CPSF1-207ENST00000531727 FBXW11Q9UKB1 542 aa18.5■□□□□ 0.55
CPSF1-207ENST00000531727 DUSP12Q9UNI6 340 aa18.5■□□□□ 0.55
CPSF1-207ENST00000531727 VWA8A3KMH1 1905 aa18.49■□□□□ 0.55
CPSF1-207ENST00000531727 TMEM189-UBE2V1I3L0A0 370 aa18.49■□□□□ 0.55
CPSF1-207ENST00000531727 HIP1RO75146 1068 aa18.49■□□□□ 0.55
CPSF1-207ENST00000531727 ZMYND10O75800 440 aa18.49■□□□□ 0.55
CPSF1-207ENST00000531727 ATP2C1P98194 919 aaPredicted RBP18.49■□□□□ 0.55
CPSF1-207ENST00000531727 DMP1Q13316 513 aaPredicted RBP18.49■□□□□ 0.55
CPSF1-207ENST00000531727 GLRA4Q5JXX5 417 aa18.49■□□□□ 0.55
CPSF1-207ENST00000531727 ASTLQ6HA08 431 aaPredicted RBP18.49■□□□□ 0.55
CPSF1-207ENST00000531727 RINT1Q6NUQ1 792 aa18.49■□□□□ 0.55
CPSF1-207ENST00000531727 PDXDC1Q6P996 788 aa18.49■□□□□ 0.55
CPSF1-207ENST00000531727 KCNK18Q7Z418 384 aa18.49■□□□□ 0.55
CPSF1-207ENST00000531727 TMEM105Q8N8V8 129 aa18.49■□□□□ 0.55
CPSF1-207ENST00000531727 DRC1Q96MC2 740 aa18.49■□□□□ 0.55
CPSF1-207ENST00000531727 MYADMQ96S97 322 aa18.49■□□□□ 0.55
CPSF1-207ENST00000531727 ACO2Q99798 780 aaKnown RBP18.49■□□□□ 0.55
CPSF1-207ENST00000531727 RUSC1Q9BVN2 902 aa18.49■□□□□ 0.55
CPSF1-207ENST00000531727 ARHGAP28Q9P2N2 729 aa18.49■□□□□ 0.55
CPSF1-207ENST00000531727 GALR2O43603 387 aaPredicted RBP18.48■□□□□ 0.55
CPSF1-207ENST00000531727 GRM5P41594 1212 aa18.48■□□□□ 0.55
CPSF1-207ENST00000531727 CLCN5P51795 746 aa18.48■□□□□ 0.55
CPSF1-207ENST00000531727 MAPK7Q13164 816 aa18.48■□□□□ 0.55
CPSF1-207ENST00000531727 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.48■□□□□ 0.55
CPSF1-207ENST00000531727 C1orf186Q6ZWK4 172 aa18.48■□□□□ 0.55
CPSF1-207ENST00000531727 TAS1R3Q7RTX0 852 aa18.48■□□□□ 0.55
CPSF1-207ENST00000531727 TMX3Q96JJ7 454 aa18.48■□□□□ 0.55
CPSF1-207ENST00000531727 UROC1Q96N76 676 aa18.48■□□□□ 0.55
CPSF1-207ENST00000531727 MRPL4Q9BYD3 311 aaKnown RBP18.48■□□□□ 0.55
CPSF1-207ENST00000531727 CDT1Q9H211 546 aa18.48■□□□□ 0.55
CPSF1-207ENST00000531727 C17orf75Q9HAS0 396 aa18.48■□□□□ 0.55
CPSF1-207ENST00000531727 PTPRHQ9HD43 1115 aa18.48■□□□□ 0.55
CPSF1-207ENST00000531727 KMT5AQ9NQR1 393 aa18.48■□□□□ 0.55
CPSF1-207ENST00000531727 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.48■□□□□ 0.55
CPSF1-207ENST00000531727 RBM19Q9Y4C8 960 aaKnown RBP18.48■□□□□ 0.55
CPSF1-207ENST00000531727 ZDBF2Q9HCK1 2354 aa18.48■□□□□ 0.55
CPSF1-207ENST00000531727 B3GAT3O94766 335 aa18.47■□□□□ 0.55
CPSF1-207ENST00000531727 FGFR3P22607 806 aa18.47■□□□□ 0.55
CPSF1-207ENST00000531727 GUCY2CP25092 1073 aa18.47■□□□□ 0.55
CPSF1-207ENST00000531727 CLCNKBP51801 687 aa18.47■□□□□ 0.55
CPSF1-207ENST00000531727 YARSP54577 528 aaKnown RBP18.47■□□□□ 0.55
CPSF1-207ENST00000531727 ZNF568Q3ZCX4 644 aa18.47■□□□□ 0.55
CPSF1-207ENST00000531727 HYIQ5T013 277 aa18.47■□□□□ 0.55
CPSF1-207ENST00000531727 LIN9Q5TKA1 542 aa18.47■□□□□ 0.55
CPSF1-207ENST00000531727 DCLRE1AQ6PJP8 1040 aa18.47■□□□□ 0.55
CPSF1-207ENST00000531727 CEP120Q8N960 986 aa18.47■□□□□ 0.55
CPSF1-207ENST00000531727 NXPE3Q969Y0 559 aa18.47■□□□□ 0.55
CPSF1-207ENST00000531727 TIPINQ9BVW5 301 aa18.47■□□□□ 0.55
CPSF1-207ENST00000531727 CCDC94Q9BW85 323 aaPredicted RBP18.47■□□□□ 0.55
CPSF1-207ENST00000531727 TARS2Q9BW92 718 aaKnown RBP18.47■□□□□ 0.55
CPSF1-207ENST00000531727 TOPORSQ9NS56 1045 aaPredicted RBP18.47■□□□□ 0.55
CPSF1-207ENST00000531727 TRIP11Q15643 1979 aa18.47■□□□□ 0.55
CPSF1-207ENST00000531727 PIEZO1Q92508 2521 aa18.46■□□□□ 0.55
CPSF1-207ENST00000531727 SMIM28A0A1B0GU29 152 aa18.46■□□□□ 0.55
CPSF1-207ENST00000531727 ADAM12O43184 909 aa18.46■□□□□ 0.55
CPSF1-207ENST00000531727 HNRNPA1P09651 372 aaKnown RBP eCLIP18.46■□□□□ 0.55
CPSF1-207ENST00000531727 IGFBP6P24592 240 aaPredicted RBP18.46■□□□□ 0.55
CPSF1-207ENST00000531727 GJB2P29033 226 aa18.46■□□□□ 0.55
CPSF1-207ENST00000531727 UPP1Q16831 310 aa18.46■□□□□ 0.55
CPSF1-207ENST00000531727 XKR4Q5GH76 650 aa18.46■□□□□ 0.55
CPSF1-207ENST00000531727 CWF19L1Q69YN2 538 aaKnown RBP18.46■□□□□ 0.55
CPSF1-207ENST00000531727 ALKAL1Q6UXT8 129 aa18.46■□□□□ 0.55
CPSF1-207ENST00000531727 GET4Q7L5D6 327 aaPredicted RBP18.46■□□□□ 0.55
CPSF1-207ENST00000531727 KCTD17Q8N5Z5 321 aa18.46■□□□□ 0.55
CPSF1-207ENST00000531727 RSAD2Q8WXG1 361 aa18.46■□□□□ 0.55
CPSF1-207ENST00000531727 GOLGA2P5Q9HBQ8 144 aa18.46■□□□□ 0.55
CPSF1-207ENST00000531727 FAM86C1Q9NVL1 165 aa18.46■□□□□ 0.55
CPSF1-207ENST00000531727 MTRRQ9UBK8 725 aa18.46■□□□□ 0.55
CPSF1-207ENST00000531727 FBXL21Q9UKT6 434 aa18.46■□□□□ 0.55
CPSF1-207ENST00000531727 DOCK8Q8NF50 2099 aa18.45■□□□□ 0.54
CPSF1-207ENST00000531727 SFI1A8K8P3 1242 aa18.45■□□□□ 0.54
CPSF1-207ENST00000531727 H3BQV1 296 aa18.45■□□□□ 0.54
CPSF1-207ENST00000531727 NARSO43776 548 aaKnown RBP18.45■□□□□ 0.54
CPSF1-207ENST00000531727 CD2BP2O95400 341 aaKnown RBP18.45■□□□□ 0.54
CPSF1-207ENST00000531727 C8AP07357 584 aa18.45■□□□□ 0.54
CPSF1-207ENST00000531727 MCF2P10911 925 aa18.45■□□□□ 0.54
CPSF1-207ENST00000531727 LAMP2P13473 410 aa18.45■□□□□ 0.54
CPSF1-207ENST00000531727 PROZP22891 400 aa18.45■□□□□ 0.54
CPSF1-207ENST00000531727 HOXA9P31269 272 aa18.45■□□□□ 0.54
CPSF1-207ENST00000531727 OSTNP61366 133 aa18.45■□□□□ 0.54
CPSF1-207ENST00000531727 RAB33AQ14088 237 aa18.45■□□□□ 0.54
CPSF1-207ENST00000531727 ZRSR1Q15695 479 aaKnown RBP18.45■□□□□ 0.54
CPSF1-207ENST00000531727 PPM1LQ5SGD2 360 aa18.45■□□□□ 0.54
CPSF1-207ENST00000531727 CD300LGQ6UXG3 332 aa18.45■□□□□ 0.54
CPSF1-207ENST00000531727 SLC44A3Q8N4M1 653 aa18.45■□□□□ 0.54
CPSF1-207ENST00000531727 FLCNQ8NFG4 579 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms