RNA–Protein interactions for RNA: ENST00000529873.5

CTNND1-221, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-221ENST00000529873 RGS9BPQ6ZS82 235 aa8.97□□□□□ -0.97
CTNND1-221ENST00000529873 C16orf86Q6ZW13 317 aa8.97□□□□□ -0.97
CTNND1-221ENST00000529873 C19orf81C9J6K1 198 aa8.97□□□□□ -0.97
CTNND1-221ENST00000529873 TBX3O15119 743 aa8.97□□□□□ -0.97
CTNND1-221ENST00000529873 BCAR1P56945 870 aa8.97□□□□□ -0.97
CTNND1-221ENST00000529873 TBC1D1Q86TI0 1168 aaPredicted RBP8.97□□□□□ -0.97
CTNND1-221ENST00000529873 ARHGAP18Q8N392 663 aa8.97□□□□□ -0.97
CTNND1-221ENST00000529873 PPM1NQ8N819 430 aa8.97□□□□□ -0.97
CTNND1-221ENST00000529873 LPAR1Q92633 364 aa8.97□□□□□ -0.97
CTNND1-221ENST00000529873 ULK4Q96C45 1275 aa8.97□□□□□ -0.97
CTNND1-221ENST00000529873 THOC1Q96FV9 657 aaKnown RBP8.97□□□□□ -0.97
CTNND1-221ENST00000529873 SARS2Q9NP81 518 aaKnown RBP8.97□□□□□ -0.97
CTNND1-221ENST00000529873 ADGRG1Q9Y653 693 aa8.97□□□□□ -0.97
CTNND1-221ENST00000529873 TTC26A0AVF1 554 aa8.97□□□□□ -0.97
CTNND1-221ENST00000529873 SNAP23O00161 211 aa8.97□□□□□ -0.97
CTNND1-221ENST00000529873 TEX33O43247 280 aa8.97□□□□□ -0.97
CTNND1-221ENST00000529873 APOA1P02647 267 aa8.97□□□□□ -0.97
CTNND1-221ENST00000529873 ATP1A1P05023 1023 aaKnown RBP8.97□□□□□ -0.97
CTNND1-221ENST00000529873 RFC5P40937 340 aa8.97□□□□□ -0.97
CTNND1-221ENST00000529873 SNX17Q15036 470 aa8.97□□□□□ -0.97
CTNND1-221ENST00000529873 NOP53Q9NZM5 478 aaKnown RBP8.97□□□□□ -0.97
CTNND1-221ENST00000529873 DAGLAQ9Y4D2 1042 aa8.97□□□□□ -0.97
CTNND1-221ENST00000529873 PIK3R2O00459 728 aa8.97□□□□□ -0.97
CTNND1-221ENST00000529873 CYP26A1O43174 497 aa8.97□□□□□ -0.97
CTNND1-221ENST00000529873 ZBTB7AO95365 584 aa8.97□□□□□ -0.97
CTNND1-221ENST00000529873 MOCS2O96007 188 aaPredicted RBP8.97□□□□□ -0.97
CTNND1-221ENST00000529873 TRIM49P0CI25 452 aa8.97□□□□□ -0.97
CTNND1-221ENST00000529873 TRIM49CP0CI26 452 aa8.97□□□□□ -0.97
CTNND1-221ENST00000529873 DDX5P17844 614 aaKnown RBP8.97□□□□□ -0.97
CTNND1-221ENST00000529873 STAT5BP51692 787 aa8.97□□□□□ -0.97
CTNND1-221ENST00000529873 SNRPFP62306 86 aaKnown RBP8.97□□□□□ -0.97
CTNND1-221ENST00000529873 KCNA1Q09470 495 aa8.97□□□□□ -0.97
CTNND1-221ENST00000529873 VEPH1Q14D04 833 aa8.97□□□□□ -0.97
CTNND1-221ENST00000529873 GRAMD1BQ3KR37 738 aa8.97□□□□□ -0.97
CTNND1-221ENST00000529873 PGBD4Q96DM1 585 aa8.97□□□□□ -0.97
CTNND1-221ENST00000529873 ATP6V1G3Q96LB4 118 aa8.97□□□□□ -0.97
CTNND1-221ENST00000529873 CYTH2Q99418 400 aa8.97□□□□□ -0.97
CTNND1-221ENST00000529873 EGFL8Q99944 293 aa8.97□□□□□ -0.97
CTNND1-221ENST00000529873 MTMR4Q9NYA4 1195 aa8.97□□□□□ -0.97
CTNND1-221ENST00000529873 IL18RAPO95256 599 aa8.96□□□□□ -0.97
CTNND1-221ENST00000529873 ATXN8OSP0DMR3 200 aa8.96□□□□□ -0.97
CTNND1-221ENST00000529873 NMT1P30419 496 aaKnown RBP8.96□□□□□ -0.97
CTNND1-221ENST00000529873 ARSEP51690 589 aa8.96□□□□□ -0.97
CTNND1-221ENST00000529873 CDH6P55285 790 aa8.96□□□□□ -0.97
CTNND1-221ENST00000529873 HDAC4P56524 1084 aa8.96□□□□□ -0.97
CTNND1-221ENST00000529873 TPI1P60174 286 aa8.96□□□□□ -0.97
CTNND1-221ENST00000529873 ZNF543Q08ER8 600 aa8.96□□□□□ -0.97
CTNND1-221ENST00000529873 NCAPHQ15003 741 aa8.96□□□□□ -0.97
CTNND1-221ENST00000529873 MAPRE2Q15555 327 aa8.96□□□□□ -0.97
CTNND1-221ENST00000529873 NLRP14Q86W24 1093 aa8.96□□□□□ -0.97
CTNND1-221ENST00000529873 MICALL2Q8IY33 904 aa8.96□□□□□ -0.97
CTNND1-221ENST00000529873 ASAP3Q8TDY4 903 aa8.96□□□□□ -0.97
CTNND1-221ENST00000529873 C1orf54Q8WWF1 131 aa8.96□□□□□ -0.97
CTNND1-221ENST00000529873 PIDD1Q9HB75 910 aa8.96□□□□□ -0.97
CTNND1-221ENST00000529873 APEX2Q9UBZ4 518 aa8.96□□□□□ -0.97
CTNND1-221ENST00000529873 PIN4Q9Y237 131 aaKnown RBP8.96□□□□□ -0.97
CTNND1-221ENST00000529873 GMNCA6NCL1 334 aa8.96□□□□□ -0.97
CTNND1-221ENST00000529873 NEMP1O14524 444 aa8.96□□□□□ -0.97
CTNND1-221ENST00000529873 FOXN1O15353 648 aa8.96□□□□□ -0.97
CTNND1-221ENST00000529873 PHF2O75151 1096 aa8.96□□□□□ -0.97
CTNND1-221ENST00000529873 TXNP10599 105 aaKnown RBP8.96□□□□□ -0.97
CTNND1-221ENST00000529873 ARFIP2P53365 341 aa8.96□□□□□ -0.97
CTNND1-221ENST00000529873 HMGCS2P54868 508 aa8.96□□□□□ -0.97
CTNND1-221ENST00000529873 EIF3EP60228 445 aaKnown RBP8.96□□□□□ -0.97
CTNND1-221ENST00000529873 AP2B1P63010 937 aa8.96□□□□□ -0.97
CTNND1-221ENST00000529873 POU5F1BQ06416 359 aa8.96□□□□□ -0.97
CTNND1-221ENST00000529873 PDCLQ13371 301 aa8.96□□□□□ -0.97
CTNND1-221ENST00000529873 ZNF235Q14590 738 aa8.96□□□□□ -0.97
CTNND1-221ENST00000529873 LBRQ14739 615 aaKnown RBP8.96□□□□□ -0.97
CTNND1-221ENST00000529873 CCDC144BQ3MJ40 725 aa8.96□□□□□ -0.97
CTNND1-221ENST00000529873 ACCSLQ4AC99 568 aa8.96□□□□□ -0.97
CTNND1-221ENST00000529873 CEP55Q53EZ4 464 aa8.96□□□□□ -0.97
CTNND1-221ENST00000529873 C1orf146Q5VVC0 180 aa8.96□□□□□ -0.97
CTNND1-221ENST00000529873 HIBCHQ6NVY1 386 aaPredicted RBP8.96□□□□□ -0.97
CTNND1-221ENST00000529873 KIAA2013Q8IYS2 634 aa8.96□□□□□ -0.97
CTNND1-221ENST00000529873 USP33Q8TEY7 942 aa8.96□□□□□ -0.97
CTNND1-221ENST00000529873 PBXIP1Q96AQ6 731 aa8.96□□□□□ -0.97
CTNND1-221ENST00000529873 SENP7Q9BQF6 1050 aa8.96□□□□□ -0.97
CTNND1-221ENST00000529873 SMYD3Q9H7B4 428 aa8.96□□□□□ -0.97
CTNND1-221ENST00000529873 POLD4Q9HCU8 107 aa8.96□□□□□ -0.97
CTNND1-221ENST00000529873 STMN3Q9NZ72 180 aa8.96□□□□□ -0.97
CTNND1-221ENST00000529873 NYAP2Q9P242 653 aa8.96□□□□□ -0.97
CTNND1-221ENST00000529873 HDAC6Q9UBN7 1215 aa8.96□□□□□ -0.97
CTNND1-221ENST00000529873 ZNRF3Q9ULT6 936 aa8.96□□□□□ -0.97
CTNND1-221ENST00000529873 STXBP3O00186 592 aa8.96□□□□□ -0.98
CTNND1-221ENST00000529873 GH1P01241 217 aa8.96□□□□□ -0.98
CTNND1-221ENST00000529873 DCAF4L1Q3SXM0 396 aa8.96□□□□□ -0.98
CTNND1-221ENST00000529873 SZRD1Q7Z422 152 aa8.96□□□□□ -0.98
CTNND1-221ENST00000529873 METTL16Q86W50 562 aaKnown RBP8.96□□□□□ -0.98
CTNND1-221ENST00000529873 RAB42Q8N4Z0 105 aa8.96□□□□□ -0.98
CTNND1-221ENST00000529873 TEX9Q8N6V9 391 aa8.96□□□□□ -0.98
CTNND1-221ENST00000529873 RNF149Q8NC42 400 aa8.96□□□□□ -0.98
CTNND1-221ENST00000529873 ASIC4Q96FT7 647 aa8.96□□□□□ -0.98
CTNND1-221ENST00000529873 STK33Q9BYT3 514 aa8.96□□□□□ -0.98
CTNND1-221ENST00000529873 SMARCAD1Q9H4L7 1026 aa8.96□□□□□ -0.98
CTNND1-221ENST00000529873 PCDHB8Q9UN66 801 aa8.96□□□□□ -0.98
CTNND1-221ENST00000529873 EIF3DO15371 548 aaKnown RBP eCLIP8.96□□□□□ -0.98
CTNND1-221ENST00000529873 PRPF4O43172 522 aaKnown RBP eCLIP8.96□□□□□ -0.984e-8■□□□□ 10.4
CTNND1-221ENST00000529873 ENTPD3O75355 529 aa8.96□□□□□ -0.98
CTNND1-221ENST00000529873 E2F6O75461 281 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms