RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 TEX101Q9BY14 249 aa6.09□□□□□ -1.43
CTR9-204ENST00000529355 TDP1Q9NUW8 608 aa6.09□□□□□ -1.43
CTR9-204ENST00000529355 TCRBV7S2A1N4TA0A589 114 aa6.08□□□□□ -1.44
CTR9-204ENST00000529355 PRSS23O95084 383 aa6.08□□□□□ -1.44
CTR9-204ENST00000529355 LPOP22079 712 aaPredicted RBP6.08□□□□□ -1.44
CTR9-204ENST00000529355 SLC6A2P23975 617 aa6.08□□□□□ -1.44
CTR9-204ENST00000529355 RRP1BQ14684 758 aaKnown RBP6.08□□□□□ -1.44
CTR9-204ENST00000529355 BMT2Q1RMZ1 405 aa6.08□□□□□ -1.44
CTR9-204ENST00000529355 KHDC1Q4VXA5 237 aaKnown RBP6.08□□□□□ -1.44
CTR9-204ENST00000529355 IFIT1BQ5T764 474 aaKnown RBP6.08□□□□□ -1.44
CTR9-204ENST00000529355 B3GNT9Q6UX72 402 aa6.08□□□□□ -1.44
CTR9-204ENST00000529355 APBB1IPQ7Z5R6 666 aaPredicted RBP6.08□□□□□ -1.44
CTR9-204ENST00000529355 C14orf80Q86SX3 495 aa6.08□□□□□ -1.44
CTR9-204ENST00000529355 COL23A1Q86Y22 540 aaPredicted RBP6.08□□□□□ -1.44
CTR9-204ENST00000529355 GRAMD1CQ8IYS0 662 aa6.08□□□□□ -1.44
CTR9-204ENST00000529355 OR52N2Q8NGI0 321 aa6.08□□□□□ -1.44
CTR9-204ENST00000529355 PPP1R35Q8TAP8 253 aa6.08□□□□□ -1.44
CTR9-204ENST00000529355 EDAQ92838 391 aa6.08□□□□□ -1.44
CTR9-204ENST00000529355 HPS3Q969F9 1004 aa6.08□□□□□ -1.44
CTR9-204ENST00000529355 MNTQ99583 582 aa6.08□□□□□ -1.44
CTR9-204ENST00000529355 MSL2Q9HCI7 577 aa6.08□□□□□ -1.44
CTR9-204ENST00000529355 FBXO34Q9NWN3 711 aa6.08□□□□□ -1.44
CTR9-204ENST00000529355 TCAF1Q9Y4C2 921 aa6.08□□□□□ -1.44
CTR9-204ENST00000529355 CCDC78A2IDD5 438 aa6.07□□□□□ -1.44
CTR9-204ENST00000529355 RFPL1O75677 317 aa6.07□□□□□ -1.44
CTR9-204ENST00000529355 ALDH2P05091 517 aa6.07□□□□□ -1.44
CTR9-204ENST00000529355 SLC6A4P31645 630 aa6.07□□□□□ -1.44
CTR9-204ENST00000529355 SELENOPP49908 381 aa6.07□□□□□ -1.44
CTR9-204ENST00000529355 DGCR2P98153 550 aa6.07□□□□□ -1.44
CTR9-204ENST00000529355 CDC42EP1Q00587 391 aa6.07□□□□□ -1.44
CTR9-204ENST00000529355 SP140Q13342 867 aa6.07□□□□□ -1.44
CTR9-204ENST00000529355 MFSD5Q6N075 450 aa6.07□□□□□ -1.44
CTR9-204ENST00000529355 PDZD4Q76G19 769 aaPredicted RBP6.07□□□□□ -1.44
CTR9-204ENST00000529355 RSPH3Q86UC2 560 aa6.07□□□□□ -1.44
CTR9-204ENST00000529355 FAM83AQ86UY5 434 aa6.07□□□□□ -1.44
CTR9-204ENST00000529355 GSPT2Q8IYD1 628 aaKnown RBP6.07□□□□□ -1.44
CTR9-204ENST00000529355 TTC9BQ8N6N2 239 aa6.07□□□□□ -1.44
CTR9-204ENST00000529355 IL17DQ8TAD2 202 aa6.07□□□□□ -1.44
CTR9-204ENST00000529355 NSUN6Q8TEA1 469 aaKnown RBP6.07□□□□□ -1.44
CTR9-204ENST00000529355 DVL3Q92997 716 aaPredicted RBP6.07□□□□□ -1.44
CTR9-204ENST00000529355 PHACTR3Q96KR7 559 aa6.07□□□□□ -1.44
CTR9-204ENST00000529355 NEU1Q99519 415 aa6.07□□□□□ -1.44
CTR9-204ENST00000529355 GPR87Q9BY21 358 aa6.07□□□□□ -1.44
CTR9-204ENST00000529355 TMPRSS5Q9H3S3 457 aa6.07□□□□□ -1.44
CTR9-204ENST00000529355 TMEM140Q9NV12 185 aa6.07□□□□□ -1.44
CTR9-204ENST00000529355 PCDHA3Q9Y5H8 950 aa6.07□□□□□ -1.44
CTR9-204ENST00000529355 XDHP47989 1333 aa6.06□□□□□ -1.44
CTR9-204ENST00000529355 E2F8A0AVK6 867 aa6.06□□□□□ -1.44
CTR9-204ENST00000529355 MUSKO15146 869 aa6.06□□□□□ -1.44
CTR9-204ENST00000529355 MFAP3LO75121 409 aa6.06□□□□□ -1.44
CTR9-204ENST00000529355 HSP90B1P14625 803 aaKnown RBP6.06□□□□□ -1.44
CTR9-204ENST00000529355 IL2RBP14784 551 aa6.06□□□□□ -1.44
CTR9-204ENST00000529355 APOBEC3AP31941 199 aaPredicted RBP6.06□□□□□ -1.44
CTR9-204ENST00000529355 MAP2K6P52564 334 aa6.06□□□□□ -1.44
CTR9-204ENST00000529355 HHEXQ03014 270 aa6.06□□□□□ -1.44
CTR9-204ENST00000529355 SNAPC2Q13487 334 aa6.06□□□□□ -1.44
CTR9-204ENST00000529355 PRKD1Q15139 912 aaPredicted RBP6.06□□□□□ -1.44
CTR9-204ENST00000529355 FLYWCH1Q4VC44 716 aa6.06□□□□□ -1.44
CTR9-204ENST00000529355 USP39Q53GS9 565 aaKnown RBP6.06□□□□□ -1.44
CTR9-204ENST00000529355 ATAT1Q5SQI0 421 aa6.06□□□□□ -1.44
CTR9-204ENST00000529355 METRNLQ641Q3 311 aa6.06□□□□□ -1.44
CTR9-204ENST00000529355 ZNF529Q6P280 563 aa6.06□□□□□ -1.44
CTR9-204ENST00000529355 DOK3Q7L591 496 aa6.06□□□□□ -1.44
CTR9-204ENST00000529355 SPRED1Q7Z699 444 aa6.06□□□□□ -1.44
CTR9-204ENST00000529355 DRC7Q8IY82 874 aa6.06□□□□□ -1.44
CTR9-204ENST00000529355 TFAP2CQ92754 450 aa6.06□□□□□ -1.44
CTR9-204ENST00000529355 MVB12AQ96EY5 273 aa6.06□□□□□ -1.44
CTR9-204ENST00000529355 FAM89AQ96GI7 184 aa6.06□□□□□ -1.44
CTR9-204ENST00000529355 ZNF768Q9H5H4 540 aaKnown RBP6.06□□□□□ -1.44
CTR9-204ENST00000529355 MANSC1Q9H8J5 431 aa6.06□□□□□ -1.44
CTR9-204ENST00000529355 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.06□□□□□ -1.44
CTR9-204ENST00000529355 CNOT11Q9UKZ1 510 aaKnown RBP6.06□□□□□ -1.44
CTR9-204ENST00000529355 PNMA8BQ9ULN7 279 aaPredicted RBP6.06□□□□□ -1.44
CTR9-204ENST00000529355 HDAC5Q9UQL6 1122 aa6.06□□□□□ -1.44
CTR9-204ENST00000529355 DRGXA6NNA5 263 aa6.05□□□□□ -1.44
CTR9-204ENST00000529355 GRXCR1A8MXD5 290 aa6.05□□□□□ -1.44
CTR9-204ENST00000529355 PRR5-ARHGAP8B1AHC4 643 aa6.05□□□□□ -1.44
CTR9-204ENST00000529355 ZNF185O15231 689 aa6.05□□□□□ -1.44
CTR9-204ENST00000529355 FAM20BO75063 409 aa6.05□□□□□ -1.44
CTR9-204ENST00000529355 ATP5JP18859 108 aa6.05□□□□□ -1.44
CTR9-204ENST00000529355 AKAP5P24588 427 aa6.05□□□□□ -1.44
CTR9-204ENST00000529355 CYP2C19P33261 490 aa6.05□□□□□ -1.44
CTR9-204ENST00000529355 CLRN1P58418 232 aa6.05□□□□□ -1.44
CTR9-204ENST00000529355 TLE1Q04724 770 aa6.05□□□□□ -1.44
CTR9-204ENST00000529355 VPS72Q15906 364 aa6.05□□□□□ -1.44
CTR9-204ENST00000529355 PGS1Q32NB8 556 aa6.05□□□□□ -1.44
CTR9-204ENST00000529355 HS1BP3Q53T59 392 aa6.05□□□□□ -1.44
CTR9-204ENST00000529355 FAM102BQ5T8I3 360 aa6.05□□□□□ -1.44
CTR9-204ENST00000529355 ERICH6BQ5W0A0 696 aa6.05□□□□□ -1.44
CTR9-204ENST00000529355 WDR75Q8IWA0 830 aaKnown RBP6.05□□□□□ -1.44
CTR9-204ENST00000529355 ANKRD35Q8N283 1001 aa6.05□□□□□ -1.44
CTR9-204ENST00000529355 OR10H5Q8NGA6 315 aa6.05□□□□□ -1.44
CTR9-204ENST00000529355 SLC35G2Q8TBE7 412 aa6.05□□□□□ -1.44
CTR9-204ENST00000529355 DIS3LQ8TF46 1054 aaKnown RBP6.05□□□□□ -1.44
CTR9-204ENST00000529355 CASKIN2Q8WXE0 1202 aa6.05□□□□□ -1.44
CTR9-204ENST00000529355 CYFIP2Q96F07 1278 aa6.05□□□□□ -1.44
CTR9-204ENST00000529355 CAMKK2Q96RR4 588 aa6.05□□□□□ -1.44
CTR9-204ENST00000529355 NUP88Q99567 741 aaPredicted RBP6.05□□□□□ -1.44
CTR9-204ENST00000529355 ACO2Q99798 780 aaKnown RBP6.05□□□□□ -1.44
CTR9-204ENST00000529355 C1QTNF3Q9BXJ4 246 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms