RNA–Protein interactions for RNA: ENST00000529288.1

CPSF1-204, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-204ENST00000529288 YARSP54577 528 aaKnown RBP14.29□□□□□ -0.12
CPSF1-204ENST00000529288 RAD51AP2Q09MP3 1159 aa14.29□□□□□ -0.12
CPSF1-204ENST00000529288 DMP1Q13316 513 aaPredicted RBP14.29□□□□□ -0.12
CPSF1-204ENST00000529288 IL17AQ16552 155 aa14.29□□□□□ -0.12
CPSF1-204ENST00000529288 C8orf34Q49A92 452 aa14.29□□□□□ -0.12
CPSF1-204ENST00000529288 PPM1LQ5SGD2 360 aa14.29□□□□□ -0.12
CPSF1-204ENST00000529288 LILRA6Q6PI73 481 aa14.29□□□□□ -0.12
CPSF1-204ENST00000529288 GRASPQ7Z6J2 395 aaPredicted RBP14.29□□□□□ -0.12
CPSF1-204ENST00000529288 SIX5Q8N196 739 aa14.29□□□□□ -0.12
CPSF1-204ENST00000529288 LNX1Q8TBB1 728 aaPredicted RBP14.29□□□□□ -0.12
CPSF1-204ENST00000529288 CLSTN3Q9BQT9 956 aa14.29□□□□□ -0.12
CPSF1-204ENST00000529288 CCDC94Q9BW85 323 aaPredicted RBP14.29□□□□□ -0.12
CPSF1-204ENST00000529288 IRF2BPLQ9H1B7 796 aa14.29□□□□□ -0.12
CPSF1-204ENST00000529288 KMT5AQ9NQR1 393 aa14.29□□□□□ -0.12
CPSF1-204ENST00000529288 ZDHHC7Q9NXF8 308 aa14.29□□□□□ -0.12
CPSF1-204ENST00000529288 IGSF9Q9P2J2 1179 aa14.29□□□□□ -0.12
CPSF1-204ENST00000529288 DUSP12Q9UNI6 340 aa14.29□□□□□ -0.12
CPSF1-204ENST00000529288 KIF3AQ9Y496 699 aa14.29□□□□□ -0.12
CPSF1-204ENST00000529288 ZMYM2Q9UBW7 1377 aa14.29□□□□□ -0.12
CPSF1-204ENST00000529288 H3BQV1 296 aa14.28□□□□□ -0.12
CPSF1-204ENST00000529288 I3L4J1 428 aa14.28□□□□□ -0.12
CPSF1-204ENST00000529288 CCL16O15467 120 aa14.28□□□□□ -0.12
CPSF1-204ENST00000529288 ADAM12O43184 909 aa14.28□□□□□ -0.12
CPSF1-204ENST00000529288 ST18O60284 1047 aa14.28□□□□□ -0.12
CPSF1-204ENST00000529288 FSHRP23945 695 aa14.28□□□□□ -0.12
CPSF1-204ENST00000529288 IGFBP6P24592 240 aaPredicted RBP14.28□□□□□ -0.12
CPSF1-204ENST00000529288 NPTX2P47972 431 aa14.28□□□□□ -0.12
CPSF1-204ENST00000529288 CLCNKBP51801 687 aa14.28□□□□□ -0.12
CPSF1-204ENST00000529288 NTHL1P78549 312 aa14.28□□□□□ -0.12
CPSF1-204ENST00000529288 ELAVL2Q12926 359 aaKnown RBP14.28□□□□□ -0.12
CPSF1-204ENST00000529288 RABEP1Q15276 862 aa14.28□□□□□ -0.12
CPSF1-204ENST00000529288 ZNF568Q3ZCX4 644 aa14.28□□□□□ -0.12
CPSF1-204ENST00000529288 CEP120Q8N960 986 aa14.28□□□□□ -0.12
CPSF1-204ENST00000529288 IGSF22Q8N9C0 903 aa14.28□□□□□ -0.12
CPSF1-204ENST00000529288 PIK3R5Q8WYR1 880 aa14.28□□□□□ -0.12
CPSF1-204ENST00000529288 RUSC1Q9BVN2 902 aa14.28□□□□□ -0.12
CPSF1-204ENST00000529288 TARS2Q9BW92 718 aaKnown RBP14.28□□□□□ -0.12
CPSF1-204ENST00000529288 MRPL4Q9BYD3 311 aaKnown RBP14.28□□□□□ -0.12
CPSF1-204ENST00000529288 GOLGA2P5Q9HBQ8 144 aa14.28□□□□□ -0.12
CPSF1-204ENST00000529288 CA14Q9ULX7 337 aa14.28□□□□□ -0.12
CPSF1-204ENST00000529288 TNFSF13BQ9Y275 285 aa14.28□□□□□ -0.12
CPSF1-204ENST00000529288 SLC16A4O15374 487 aa14.27□□□□□ -0.13
CPSF1-204ENST00000529288 PI15O43692 258 aa14.27□□□□□ -0.13
CPSF1-204ENST00000529288 GFRA3O60609 400 aa14.27□□□□□ -0.13
CPSF1-204ENST00000529288 C8AP07357 584 aa14.27□□□□□ -0.13
CPSF1-204ENST00000529288 OR1D2P34982 312 aa14.27□□□□□ -0.13
CPSF1-204ENST00000529288 BRCC3P46736 316 aa14.27□□□□□ -0.13
CPSF1-204ENST00000529288 CLCN5P51795 746 aa14.27□□□□□ -0.13
CPSF1-204ENST00000529288 NAB2Q15742 525 aa14.27□□□□□ -0.13
CPSF1-204ENST00000529288 RINT1Q6NUQ1 792 aa14.27□□□□□ -0.13
CPSF1-204ENST00000529288 DCLRE1AQ6PJP8 1040 aa14.27□□□□□ -0.13
CPSF1-204ENST00000529288 KCNK18Q7Z418 384 aa14.27□□□□□ -0.13
CPSF1-204ENST00000529288 GPR65Q8IYL9 337 aa14.27□□□□□ -0.13
CPSF1-204ENST00000529288 SLC44A3Q8N4M1 653 aa14.27□□□□□ -0.13
CPSF1-204ENST00000529288 CDK5RAP3Q96JB5 506 aa14.27□□□□□ -0.13
CPSF1-204ENST00000529288 DRC1Q96MC2 740 aa14.27□□□□□ -0.13
CPSF1-204ENST00000529288 ACO2Q99798 780 aaKnown RBP14.27□□□□□ -0.13
CPSF1-204ENST00000529288 CDT1Q9H211 546 aa14.27□□□□□ -0.13
CPSF1-204ENST00000529288 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.27□□□□□ -0.13
CPSF1-204ENST00000529288 FBXW11Q9UKB1 542 aa14.27□□□□□ -0.13
CPSF1-204ENST00000529288 PHLPP2Q6ZVD8 1323 aa14.26□□□□□ -0.13
CPSF1-204ENST00000529288 SMIM28A0A1B0GU29 152 aa14.26□□□□□ -0.13
CPSF1-204ENST00000529288 VWA3AA6NCI4 1184 aa14.26□□□□□ -0.13
CPSF1-204ENST00000529288 LAD1O00515 517 aa14.26□□□□□ -0.13
CPSF1-204ENST00000529288 LAMP2P13473 410 aa14.26□□□□□ -0.13
CPSF1-204ENST00000529288 GJB2P29033 226 aa14.26□□□□□ -0.13
CPSF1-204ENST00000529288 TKTP29401 623 aaKnown RBP14.26□□□□□ -0.13
CPSF1-204ENST00000529288 GRM5P41594 1212 aa14.26□□□□□ -0.13
CPSF1-204ENST00000529288 MATR3P43243 847 aaKnown RBP eCLIP14.26□□□□□ -0.13
CPSF1-204ENST00000529288 NUBP1P53384 320 aa14.26□□□□□ -0.13
CPSF1-204ENST00000529288 ARPP19P56211 112 aa14.26□□□□□ -0.13
CPSF1-204ENST00000529288 STRN3Q13033 797 aa14.26□□□□□ -0.13
CPSF1-204ENST00000529288 CWF19L1Q69YN2 538 aaKnown RBP14.26□□□□□ -0.13
CPSF1-204ENST00000529288 PDXDC1Q6P996 788 aa14.26□□□□□ -0.13
CPSF1-204ENST00000529288 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.26□□□□□ -0.13
CPSF1-204ENST00000529288 DAW1Q8N136 415 aa14.26□□□□□ -0.13
CPSF1-204ENST00000529288 SLC7A14Q8TBB6 771 aa14.26□□□□□ -0.13
CPSF1-204ENST00000529288 ACAP3Q96P50 834 aa14.26□□□□□ -0.13
CPSF1-204ENST00000529288 PPP1R10Q96QC0 940 aaKnown RBP14.26□□□□□ -0.13
CPSF1-204ENST00000529288 TMEM134Q9H6X4 195 aa14.26□□□□□ -0.13
CPSF1-204ENST00000529288 TOPORSQ9NS56 1045 aaPredicted RBP14.26□□□□□ -0.13
CPSF1-204ENST00000529288 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.26□□□□□ -0.13
CPSF1-204ENST00000529288 EPS15L1Q9UBC2 864 aa14.26□□□□□ -0.13
CPSF1-204ENST00000529288 TRAPPC3O43617 180 aa14.25□□□□□ -0.13
CPSF1-204ENST00000529288 XYLBO75191 536 aa14.25□□□□□ -0.13
CPSF1-204ENST00000529288 C1RP00736 705 aa14.25□□□□□ -0.13
CPSF1-204ENST00000529288 NPR3P17342 541 aa14.25□□□□□ -0.13
CPSF1-204ENST00000529288 PRPHP41219 470 aa14.25□□□□□ -0.13
CPSF1-204ENST00000529288 CACNB1Q02641 598 aaPredicted RBP14.25□□□□□ -0.13
CPSF1-204ENST00000529288 SEZ6Q53EL9 994 aa14.25□□□□□ -0.13
CPSF1-204ENST00000529288 RILPL1Q5EBL4 403 aa14.25□□□□□ -0.13
CPSF1-204ENST00000529288 AXDND1Q5T1B0 1012 aaPredicted RBP14.25□□□□□ -0.13
CPSF1-204ENST00000529288 C1orf186Q6ZWK4 172 aa14.25□□□□□ -0.13
CPSF1-204ENST00000529288 TMX3Q96JJ7 454 aa14.25□□□□□ -0.13
CPSF1-204ENST00000529288 ZBTB45Q96K62 511 aaPredicted RBP14.25□□□□□ -0.13
CPSF1-204ENST00000529288 UROC1Q96N76 676 aa14.25□□□□□ -0.13
CPSF1-204ENST00000529288 MMTAG2Q9BU76 263 aaKnown RBP14.25□□□□□ -0.13
CPSF1-204ENST00000529288 RHOBTB2Q9BYZ6 727 aa14.25□□□□□ -0.13
CPSF1-204ENST00000529288 UPF2Q9HAU5 1272 aaKnown RBP14.25□□□□□ -0.13
CPSF1-204ENST00000529288 ANKFY1Q9P2R3 1169 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms