RNA–Protein interactions for RNA: ENST00000528611.1

MACF1-228, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-228ENST00000528611 ITGA4P13612 1032 aa6.75□□□□□ -1.33
MACF1-228ENST00000528611 CSF2RAP15509 400 aa6.75□□□□□ -1.33
MACF1-228ENST00000528611 ZNF18P17022 549 aa6.75□□□□□ -1.33
MACF1-228ENST00000528611 RPL9P32969 192 aaKnown RBP6.75□□□□□ -1.33
MACF1-228ENST00000528611 PNPLA4P41247 253 aa6.75□□□□□ -1.33
MACF1-228ENST00000528611 MATR3P43243 847 aaKnown RBP eCLIP6.75□□□□□ -1.33
MACF1-228ENST00000528611 KCNJ6P48051 423 aa6.75□□□□□ -1.33
MACF1-228ENST00000528611 CCL23P55773 120 aa6.75□□□□□ -1.33
MACF1-228ENST00000528611 BFSP1Q12934 665 aa6.75□□□□□ -1.33
MACF1-228ENST00000528611 NCAPHQ15003 741 aa6.75□□□□□ -1.33
MACF1-228ENST00000528611 ZBTB6Q15916 424 aa6.75□□□□□ -1.33
MACF1-228ENST00000528611 UBXN11Q5T124 520 aa6.75□□□□□ -1.33
MACF1-228ENST00000528611 GLB1LQ6UWU2 654 aa6.75□□□□□ -1.33
MACF1-228ENST00000528611 CRELD2Q6UXH1 353 aaPredicted RBP6.75□□□□□ -1.33
MACF1-228ENST00000528611 FMNL3Q8IVF7 1028 aa6.75□□□□□ -1.33
MACF1-228ENST00000528611 TRIM59Q8IWR1 403 aa6.75□□□□□ -1.33
MACF1-228ENST00000528611 NELFCDQ8IXH7 590 aa6.75□□□□□ -1.33
MACF1-228ENST00000528611 GPR65Q8IYL9 337 aa6.75□□□□□ -1.33
MACF1-228ENST00000528611 FAM186BQ8IYM0 893 aa6.75□□□□□ -1.33
MACF1-228ENST00000528611 SMYD4Q8IYR2 804 aaPredicted RBP6.75□□□□□ -1.33
MACF1-228ENST00000528611 C7orf61Q8IZ16 206 aa6.75□□□□□ -1.33
MACF1-228ENST00000528611 TTC39CQ8N584 583 aa6.75□□□□□ -1.33
MACF1-228ENST00000528611 SMG8Q8ND04 991 aaKnown RBP6.75□□□□□ -1.33
MACF1-228ENST00000528611 GLIS3Q8NEA6 775 aa6.75□□□□□ -1.33
MACF1-228ENST00000528611 SPATA18Q8TC71 538 aa6.75□□□□□ -1.33
MACF1-228ENST00000528611 TAF4BQ92750 862 aa6.75□□□□□ -1.33
MACF1-228ENST00000528611 ERCC4Q92889 916 aaPredicted RBP6.75□□□□□ -1.33
MACF1-228ENST00000528611 HPS3Q969F9 1004 aa6.75□□□□□ -1.33
MACF1-228ENST00000528611 JAKMIP2Q96AA8 810 aa6.75□□□□□ -1.33
MACF1-228ENST00000528611 DDX27Q96GQ7 796 aaKnown RBP6.75□□□□□ -1.33
MACF1-228ENST00000528611 BORCS6Q96GS4 357 aa6.75□□□□□ -1.33
MACF1-228ENST00000528611 FNBP1Q96RU3 617 aa6.75□□□□□ -1.33
MACF1-228ENST00000528611 DUSP9Q99956 384 aaKnown RBP6.75□□□□□ -1.33
MACF1-228ENST00000528611 GDF15Q99988 308 aa6.75□□□□□ -1.33
MACF1-228ENST00000528611 SRRTQ9BXP5 876 aaKnown RBP6.75□□□□□ -1.33
MACF1-228ENST00000528611 FGFBP2Q9BYJ0 223 aa6.75□□□□□ -1.33
MACF1-228ENST00000528611 TMEM117Q9H0C3 514 aa6.75□□□□□ -1.33
MACF1-228ENST00000528611 DNAJC25Q9H1X3 360 aa6.75□□□□□ -1.33
MACF1-228ENST00000528611 RSAD1Q9HA92 442 aa6.75□□□□□ -1.33
MACF1-228ENST00000528611 POLD4Q9HCU8 107 aa6.75□□□□□ -1.33
MACF1-228ENST00000528611 PRDM5Q9NQX1 630 aaPredicted RBP6.75□□□□□ -1.33
MACF1-228ENST00000528611 RBAKQ9NYW8 714 aaPredicted RBP6.75□□□□□ -1.33
MACF1-228ENST00000528611 PLA2G2EQ9NZK7 142 aa6.75□□□□□ -1.33
MACF1-228ENST00000528611 UBQLN1Q9UMX0 589 aaKnown RBP6.75□□□□□ -1.33
MACF1-228ENST00000528611 MAPK8IP1Q9UQF2 711 aa6.75□□□□□ -1.33
MACF1-228ENST00000528611 USP20Q9Y2K6 914 aa6.75□□□□□ -1.33
MACF1-228ENST00000528611 COQ4Q9Y3A0 265 aa6.75□□□□□ -1.33
MACF1-228ENST00000528611 RWDD3Q9Y3V2 267 aa6.75□□□□□ -1.33
MACF1-228ENST00000528611 IPPQ9Y573 584 aa6.75□□□□□ -1.33
MACF1-228ENST00000528611 TTC3P53804 2025 aa6.75□□□□□ -1.33
MACF1-228ENST00000528611 LTBP2Q14767 1821 aa6.75□□□□□ -1.33
MACF1-228ENST00000528611 UMODL1Q5DID0 1318 aa6.75□□□□□ -1.33
MACF1-228ENST00000528611 CBFA2T2O43439 604 aa6.74□□□□□ -1.33
MACF1-228ENST00000528611 AKAP3O75969 853 aa6.74□□□□□ -1.33
MACF1-228ENST00000528611 THP07101 528 aa6.74□□□□□ -1.33
MACF1-228ENST00000528611 CDK11BP21127 795 aaKnown RBP6.74□□□□□ -1.33
MACF1-228ENST00000528611 RFX1P22670 979 aa6.74□□□□□ -1.33
MACF1-228ENST00000528611 ITGB8P26012 769 aa6.74□□□□□ -1.33
MACF1-228ENST00000528611 LRPAP1P30533 357 aa6.74□□□□□ -1.33
MACF1-228ENST00000528611 ATICP31939 592 aa6.74□□□□□ -1.33
MACF1-228ENST00000528611 PBX2P40425 430 aa6.74□□□□□ -1.33
MACF1-228ENST00000528611 VAMP7P51809 220 aa6.74□□□□□ -1.33
MACF1-228ENST00000528611 PMS1P54277 932 aaKnown RBP6.74□□□□□ -1.33
MACF1-228ENST00000528611 HTRA4P83105 476 aaPredicted RBP6.74□□□□□ -1.33
MACF1-228ENST00000528611 CYP24A1Q07973 514 aa6.74□□□□□ -1.33
MACF1-228ENST00000528611 GRIK3Q13003 919 aa6.74□□□□□ -1.33
MACF1-228ENST00000528611 MAN2A1Q16706 1144 aa6.74□□□□□ -1.33
MACF1-228ENST00000528611 DUOXA2Q1HG44 320 aa6.74□□□□□ -1.33
MACF1-228ENST00000528611 SLC10A6Q3KNW5 377 aa6.74□□□□□ -1.33
MACF1-228ENST00000528611 FILIP1LQ4L180 1135 aa6.74□□□□□ -1.33
MACF1-228ENST00000528611 TCP11X2Q5H9J9 407 aa6.74□□□□□ -1.33
MACF1-228ENST00000528611 TMEM240Q5SV17 173 aa6.74□□□□□ -1.33
MACF1-228ENST00000528611 EEF1DP3Q658K8 133 aa6.74□□□□□ -1.33
MACF1-228ENST00000528611 KRT39Q6A163 491 aa6.74□□□□□ -1.33
MACF1-228ENST00000528611 ISM2Q6H9L7 571 aa6.74□□□□□ -1.33
MACF1-228ENST00000528611 KLHL10Q6JEL2 608 aa6.74□□□□□ -1.33
MACF1-228ENST00000528611 SARM1Q6SZW1 724 aa6.74□□□□□ -1.33
MACF1-228ENST00000528611 DPH6Q7L8W6 267 aa6.74□□□□□ -1.33
MACF1-228ENST00000528611 RTN4RL1Q86UN2 441 aaPredicted RBP6.74□□□□□ -1.33
MACF1-228ENST00000528611 CMTR2Q8IYT2 770 aaKnown RBP6.74□□□□□ -1.33
MACF1-228ENST00000528611 ABI1Q8IZP0 508 aa6.74□□□□□ -1.33
MACF1-228ENST00000528611 URGCPQ8TCY9 931 aa6.74□□□□□ -1.33
MACF1-228ENST00000528611 BADQ92934 168 aa6.74□□□□□ -1.33
MACF1-228ENST00000528611 ZNF689Q96CS4 500 aaPredicted RBP6.74□□□□□ -1.33
MACF1-228ENST00000528611 VWCEQ96DN2 955 aa6.74□□□□□ -1.33
MACF1-228ENST00000528611 SCLYQ96I15 445 aa6.74□□□□□ -1.33
MACF1-228ENST00000528611 SNX27Q96L92 541 aa6.74□□□□□ -1.33
MACF1-228ENST00000528611 SAMD11Q96NU1 681 aa6.74□□□□□ -1.33
MACF1-228ENST00000528611 CBWD1Q9BRT8 395 aa6.74□□□□□ -1.33
MACF1-228ENST00000528611 FAM213AQ9BRX8 229 aa6.74□□□□□ -1.33
MACF1-228ENST00000528611 TMEM175Q9BSA9 504 aa6.74□□□□□ -1.33
MACF1-228ENST00000528611 OXCT2Q9BYC2 517 aaPredicted RBP6.74□□□□□ -1.33
MACF1-228ENST00000528611 DNAI2Q9GZS0 605 aa6.74□□□□□ -1.33
MACF1-228ENST00000528611 VRTNQ9H8Y1 702 aa6.74□□□□□ -1.33
MACF1-228ENST00000528611 TMEM8AQ9HCN3 771 aa6.74□□□□□ -1.33
MACF1-228ENST00000528611 ANKFY1Q9P2R3 1169 aa6.74□□□□□ -1.33
MACF1-228ENST00000528611 LIMA1Q9UHB6 759 aaKnown RBP6.74□□□□□ -1.33
MACF1-228ENST00000528611 FBXL5Q9UKA1 691 aa6.74□□□□□ -1.33
MACF1-228ENST00000528611 LRFN2Q9ULH4 789 aa6.74□□□□□ -1.33
MACF1-228ENST00000528611 CTNND2Q9UQB3 1225 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms