RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 KCNJ12Q14500 433 aa13.21□□□□□ -0.3
TRAF3IP2-211ENST00000528599 UVSSAQ2YD98 709 aa13.21□□□□□ -0.3
TRAF3IP2-211ENST00000528599 TCP11X2Q5H9J9 407 aa13.21□□□□□ -0.3
TRAF3IP2-211ENST00000528599 FRMD5Q7Z6J6 570 aa13.21□□□□□ -0.3
TRAF3IP2-211ENST00000528599 CREBRFQ8IUR6 639 aa13.21□□□□□ -0.3
TRAF3IP2-211ENST00000528599 CRIPAKQ8N1N5 446 aa13.21□□□□□ -0.3
TRAF3IP2-211ENST00000528599 ANP32BQ92688 251 aaKnown RBP13.21□□□□□ -0.3
TRAF3IP2-211ENST00000528599 RPF1Q9H9Y2 349 aaKnown RBP13.21□□□□□ -0.3
TRAF3IP2-211ENST00000528599 PDE11AQ9HCR9 933 aa13.21□□□□□ -0.3
TRAF3IP2-211ENST00000528599 KLK14Q9P0G3 267 aa13.21□□□□□ -0.3
TRAF3IP2-211ENST00000528599 CXXC1Q9P0U4 656 aaPredicted RBP13.21□□□□□ -0.3
TRAF3IP2-211ENST00000528599 PARP2Q9UGN5 583 aa13.21□□□□□ -0.3
TRAF3IP2-211ENST00000528599 ARMCX3Q9UH62 379 aaPredicted RBP13.21□□□□□ -0.3
TRAF3IP2-211ENST00000528599 COL6A3P12111 3177 aa13.21□□□□□ -0.3
TRAF3IP2-211ENST00000528599 TTC26A0AVF1 554 aa13.2□□□□□ -0.3
TRAF3IP2-211ENST00000528599 LACTBL1A8MY62 500 aa13.2□□□□□ -0.3
TRAF3IP2-211ENST00000528599 FGBP02675 491 aa13.2□□□□□ -0.3
TRAF3IP2-211ENST00000528599 MCCD1P59942 119 aaPredicted RBP13.2□□□□□ -0.3
TRAF3IP2-211ENST00000528599 DLG4P78352 724 aa13.2□□□□□ -0.3
TRAF3IP2-211ENST00000528599 POU5F1Q01860 360 aaKnown RBP13.2□□□□□ -0.3
TRAF3IP2-211ENST00000528599 CCDC173Q0VFZ6 552 aa13.2□□□□□ -0.3
TRAF3IP2-211ENST00000528599 PSMD6Q15008 389 aa13.2□□□□□ -0.3
TRAF3IP2-211ENST00000528599 HABP4Q5JVS0 413 aaKnown RBP13.2□□□□□ -0.3
TRAF3IP2-211ENST00000528599 C1orf220Q5T0J3 134 aa13.2□□□□□ -0.3
TRAF3IP2-211ENST00000528599 ALKAL1Q6UXT8 129 aa13.2□□□□□ -0.3
TRAF3IP2-211ENST00000528599 MICAL3Q7RTP6 2002 aa13.2□□□□□ -0.3
TRAF3IP2-211ENST00000528599 OTOP2Q7RTS6 562 aa13.2□□□□□ -0.3
TRAF3IP2-211ENST00000528599 FAM114A1Q8IWE2 563 aa13.2□□□□□ -0.3
TRAF3IP2-211ENST00000528599 TRIM59Q8IWR1 403 aa13.2□□□□□ -0.3
TRAF3IP2-211ENST00000528599 PARD3BQ8TEW8 1205 aa13.2□□□□□ -0.3
TRAF3IP2-211ENST00000528599 CCDC127Q96BQ5 260 aa13.2□□□□□ -0.3
TRAF3IP2-211ENST00000528599 FAM212AQ96EL1 285 aa13.2□□□□□ -0.3
TRAF3IP2-211ENST00000528599 FAM84AQ96KN4 292 aa13.2□□□□□ -0.3
TRAF3IP2-211ENST00000528599 SNX27Q96L92 541 aa13.2□□□□□ -0.3
TRAF3IP2-211ENST00000528599 POP1Q99575 1024 aaKnown RBP13.2□□□□□ -0.3
TRAF3IP2-211ENST00000528599 METTL14Q9HCE5 456 aaKnown RBP13.2□□□□□ -0.3
TRAF3IP2-211ENST00000528599 RNF19AQ9NV58 838 aa13.2□□□□□ -0.3
TRAF3IP2-211ENST00000528599 MAGEC2Q9UBF1 373 aaPredicted RBP13.2□□□□□ -0.3
TRAF3IP2-211ENST00000528599 PTPRSQ13332 1948 aa13.19□□□□□ -0.3
TRAF3IP2-211ENST00000528599 TULP1O00294 542 aaPredicted RBP13.19□□□□□ -0.3
TRAF3IP2-211ENST00000528599 SOX1O00570 391 aaPredicted RBP13.19□□□□□ -0.3
TRAF3IP2-211ENST00000528599 EOMESO95936 686 aa13.19□□□□□ -0.3
TRAF3IP2-211ENST00000528599 TRIM49P0CI25 452 aa13.19□□□□□ -0.3
TRAF3IP2-211ENST00000528599 TRIM49CP0CI26 452 aa13.19□□□□□ -0.3
TRAF3IP2-211ENST00000528599 ACTN1P12814 892 aa13.19□□□□□ -0.3
TRAF3IP2-211ENST00000528599 CDK11BP21127 795 aaKnown RBP13.19□□□□□ -0.3
TRAF3IP2-211ENST00000528599 EEF1GP26641 437 aaKnown RBP13.19□□□□□ -0.3
TRAF3IP2-211ENST00000528599 VAMP7P51809 220 aa13.19□□□□□ -0.3
TRAF3IP2-211ENST00000528599 AFF1P51825 1210 aaKnown RBP13.19□□□□□ -0.3
TRAF3IP2-211ENST00000528599 YARSP54577 528 aaKnown RBP13.19□□□□□ -0.3
TRAF3IP2-211ENST00000528599 WDR5P61964 334 aaKnown RBP13.19□□□□□ -0.3
TRAF3IP2-211ENST00000528599 SPAG1Q07617 926 aa13.19□□□□□ -0.3
TRAF3IP2-211ENST00000528599 BFSP1Q12934 665 aa13.19□□□□□ -0.3
TRAF3IP2-211ENST00000528599 HSP90AA2PQ14568 343 aaPredicted RBP13.19□□□□□ -0.3
TRAF3IP2-211ENST00000528599 KRT31Q15323 416 aa13.19□□□□□ -0.3
TRAF3IP2-211ENST00000528599 INTS8Q75QN2 995 aaKnown RBP13.19□□□□□ -0.3
TRAF3IP2-211ENST00000528599 APTXQ7Z2E3 356 aaKnown RBP13.19□□□□□ -0.3
TRAF3IP2-211ENST00000528599 HACE1Q8IYU2 909 aa13.19□□□□□ -0.3
TRAF3IP2-211ENST00000528599 TMC2Q8TDI7 906 aa13.19□□□□□ -0.3
TRAF3IP2-211ENST00000528599 PGBD4Q96DM1 585 aa13.19□□□□□ -0.3
TRAF3IP2-211ENST00000528599 ZFP42Q96MM3 310 aa13.19□□□□□ -0.3
TRAF3IP2-211ENST00000528599 ELAC1Q9H777 363 aaKnown RBP13.19□□□□□ -0.3
TRAF3IP2-211ENST00000528599 TOPORSQ9NS56 1045 aaPredicted RBP13.19□□□□□ -0.3
TRAF3IP2-211ENST00000528599 TMEM161AQ9NX61 479 aa13.19□□□□□ -0.3
TRAF3IP2-211ENST00000528599 LIMA1Q9UHB6 759 aaKnown RBP13.19□□□□□ -0.3
TRAF3IP2-211ENST00000528599 TTC3P53804 2025 aa13.18□□□□□ -0.3
TRAF3IP2-211ENST00000528599 PTPRJQ12913 1337 aa13.18□□□□□ -0.3
TRAF3IP2-211ENST00000528599 LRRIQ3A6PVS8 624 aaPredicted RBP13.18□□□□□ -0.3
TRAF3IP2-211ENST00000528599 BAIAP3O94812 1187 aa13.18□□□□□ -0.3
TRAF3IP2-211ENST00000528599 DLATP10515 647 aaKnown RBP13.18□□□□□ -0.3
TRAF3IP2-211ENST00000528599 KRT13P13646 458 aa13.18□□□□□ -0.3
TRAF3IP2-211ENST00000528599 MTIF2P46199 727 aaKnown RBP13.18□□□□□ -0.3
TRAF3IP2-211ENST00000528599 TPM4P67936 248 aa13.18□□□□□ -0.3
TRAF3IP2-211ENST00000528599 DEFB103AP81534 67 aa13.18□□□□□ -0.3
TRAF3IP2-211ENST00000528599 XKR4Q5GH76 650 aa13.18□□□□□ -0.3
TRAF3IP2-211ENST00000528599 CLLU1OSQ5K130 101 aa13.18□□□□□ -0.3
TRAF3IP2-211ENST00000528599 RASIP1Q5U651 963 aa13.18□□□□□ -0.3
TRAF3IP2-211ENST00000528599 FAM109BQ6ICB4 259 aaPredicted RBP13.18□□□□□ -0.3
TRAF3IP2-211ENST00000528599 PSRC1Q6PGN9 363 aaPredicted RBP13.18□□□□□ -0.3
TRAF3IP2-211ENST00000528599 GSTCDQ8NEC7 633 aa13.18□□□□□ -0.3
TRAF3IP2-211ENST00000528599 SLC35C1Q96A29 364 aa13.18□□□□□ -0.3
TRAF3IP2-211ENST00000528599 ZMAT2Q96NC0 199 aaKnown RBP13.18□□□□□ -0.3
TRAF3IP2-211ENST00000528599 GAD1Q99259 594 aa13.18□□□□□ -0.3
TRAF3IP2-211ENST00000528599 TUBGCP2Q9BSJ2 902 aa13.18□□□□□ -0.3
TRAF3IP2-211ENST00000528599 RSAD1Q9HA92 442 aa13.18□□□□□ -0.3
TRAF3IP2-211ENST00000528599 PLEKHA5Q9HAU0 1116 aa13.18□□□□□ -0.3
TRAF3IP2-211ENST00000528599 TAB2Q9NYJ8 693 aa13.18□□□□□ -0.3
TRAF3IP2-211ENST00000528599 GIT1Q9Y2X7 761 aa13.18□□□□□ -0.3
TRAF3IP2-211ENST00000528599 PCDHB7Q9Y5E2 793 aa13.18□□□□□ -0.3
TRAF3IP2-211ENST00000528599 ANK1P16157 1881 aa13.18□□□□□ -0.3
TRAF3IP2-211ENST00000528599 ARL5CA6NH57 179 aa13.18□□□□□ -0.3
TRAF3IP2-211ENST00000528599 LRRC10BA6NIK2 292 aa13.18□□□□□ -0.3
TRAF3IP2-211ENST00000528599 PTGESO14684 152 aa13.18□□□□□ -0.3
TRAF3IP2-211ENST00000528599 EFCAB14O75071 495 aa13.18□□□□□ -0.3
TRAF3IP2-211ENST00000528599 OFD1O75665 1012 aa13.18□□□□□ -0.3
TRAF3IP2-211ENST00000528599 IL18RAPO95256 599 aa13.18□□□□□ -0.3
TRAF3IP2-211ENST00000528599 NFICP08651 508 aa13.18□□□□□ -0.3
TRAF3IP2-211ENST00000528599 FGFR1P11362 822 aa13.18□□□□□ -0.3
TRAF3IP2-211ENST00000528599 MLH1P40692 756 aa13.18□□□□□ -0.3
TRAF3IP2-211ENST00000528599 CLDN10P78369 228 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms