RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 IVDP26440 423 aa15.63■□□□□ 0.09
CAPN1-214ENST00000528165 POLD1P28340 1107 aa15.63■□□□□ 0.09
CAPN1-214ENST00000528165 VPS41P49754 854 aa15.63■□□□□ 0.09
CAPN1-214ENST00000528165 CETN1Q12798 172 aa15.63■□□□□ 0.09
CAPN1-214ENST00000528165 AP3B2Q13367 1082 aa15.63■□□□□ 0.09
CAPN1-214ENST00000528165 STXBP4Q6ZWJ1 553 aa15.63■□□□□ 0.09
CAPN1-214ENST00000528165 ATG4AQ8WYN0 398 aa15.63■□□□□ 0.09
CAPN1-214ENST00000528165 VTI1AQ96AJ9 217 aa15.63■□□□□ 0.09
CAPN1-214ENST00000528165 PWWP2AQ96N64 755 aa15.63■□□□□ 0.09
CAPN1-214ENST00000528165 PARVGQ9HBI0 331 aa15.63■□□□□ 0.09
CAPN1-214ENST00000528165 SLCO1B3Q9NPD5 702 aa15.63■□□□□ 0.09
CAPN1-214ENST00000528165 CHST7Q9NS84 486 aa15.63■□□□□ 0.09
CAPN1-214ENST00000528165 STOML1Q9UBI4 398 aa15.63■□□□□ 0.09
CAPN1-214ENST00000528165 RPL26L1Q9UNX3 145 aaKnown RBP15.63■□□□□ 0.09
CAPN1-214ENST00000528165 USP20Q9Y2K6 914 aa15.63■□□□□ 0.09
CAPN1-214ENST00000528165 CDK5RAP2Q96SN8 1893 aa15.63■□□□□ 0.09
CAPN1-214ENST00000528165 SPAG7O75391 227 aa15.63■□□□□ 0.09
CAPN1-214ENST00000528165 ASMTLO95671 621 aa15.63■□□□□ 0.09
CAPN1-214ENST00000528165 SP100P23497 879 aaPredicted RBP15.63■□□□□ 0.09
CAPN1-214ENST00000528165 GCLCP48506 637 aaPredicted RBP15.63■□□□□ 0.09
CAPN1-214ENST00000528165 SPARCL1Q14515 664 aa15.63■□□□□ 0.09
CAPN1-214ENST00000528165 CCDC6Q16204 474 aa15.63■□□□□ 0.09
CAPN1-214ENST00000528165 SLC15A2Q16348 729 aa15.63■□□□□ 0.09
CAPN1-214ENST00000528165 QRICH1Q2TAL8 776 aa15.63■□□□□ 0.09
CAPN1-214ENST00000528165 Q4G0T1 1027 aa15.63■□□□□ 0.09
CAPN1-214ENST00000528165 LMO3Q8TAP4 145 aa15.63■□□□□ 0.09
CAPN1-214ENST00000528165 LRRC8CQ8TDW0 803 aa15.63■□□□□ 0.09
CAPN1-214ENST00000528165 SPOCK2Q92563 424 aa15.63■□□□□ 0.09
CAPN1-214ENST00000528165 FAM20AQ96MK3 541 aa15.63■□□□□ 0.09
CAPN1-214ENST00000528165 GPR101Q96P66 508 aaPredicted RBP15.63■□□□□ 0.09
CAPN1-214ENST00000528165 SETDB2Q96T68 719 aa15.63■□□□□ 0.09
CAPN1-214ENST00000528165 PCDHB18PQ96TA0 734 aa15.63■□□□□ 0.09
CAPN1-214ENST00000528165 EIF2AK1Q9BQI3 630 aaKnown RBP15.63■□□□□ 0.09
CAPN1-214ENST00000528165 RGL1Q9NZL6 768 aa15.63■□□□□ 0.09
CAPN1-214ENST00000528165 BCS1LQ9Y276 419 aa15.63■□□□□ 0.09
CAPN1-214ENST00000528165 SORBS3O60504 671 aa15.63■□□□□ 0.09
CAPN1-214ENST00000528165 TOM1O60784 492 aa15.63■□□□□ 0.09
CAPN1-214ENST00000528165 RPS6KA3P51812 740 aa15.63■□□□□ 0.09
CAPN1-214ENST00000528165 SESN3P58005 492 aa15.63■□□□□ 0.09
CAPN1-214ENST00000528165 PICALMQ13492 652 aa15.63■□□□□ 0.09
CAPN1-214ENST00000528165 TMEM63BQ5T3F8 832 aa15.63■□□□□ 0.09
CAPN1-214ENST00000528165 ARHGEF19Q8IW93 802 aa15.63■□□□□ 0.09
CAPN1-214ENST00000528165 RIBC1Q8N443 379 aaPredicted RBP15.63■□□□□ 0.09
CAPN1-214ENST00000528165 ZNF653Q96CK0 615 aa15.63■□□□□ 0.09
CAPN1-214ENST00000528165 C9orf72Q96LT7 481 aa15.63■□□□□ 0.09
CAPN1-214ENST00000528165 POLR3CQ9BUI4 534 aaPredicted RBP15.63■□□□□ 0.09
CAPN1-214ENST00000528165 DMAC2Q9NW81 257 aa15.63■□□□□ 0.09
CAPN1-214ENST00000528165 RAD21O60216 631 aa15.62■□□□□ 0.09
CAPN1-214ENST00000528165 GZMAP12544 262 aa15.62■□□□□ 0.09
CAPN1-214ENST00000528165 MARK3P27448 753 aa15.62■□□□□ 0.09
CAPN1-214ENST00000528165 GRIPAP1Q4V328 841 aa15.62■□□□□ 0.09
CAPN1-214ENST00000528165 RBM26Q5T8P6 1007 aaKnown RBP15.62■□□□□ 0.09
CAPN1-214ENST00000528165 IRGCQ6NXR0 463 aa15.62■□□□□ 0.09
CAPN1-214ENST00000528165 FAM178BQ8IXR5 827 aa15.62■□□□□ 0.09
CAPN1-214ENST00000528165 MARCH10Q8NA82 808 aaPredicted RBP15.62■□□□□ 0.09
CAPN1-214ENST00000528165 PIDD1Q9HB75 910 aa15.62■□□□□ 0.09
CAPN1-214ENST00000528165 FAM86B1E9PN63 330 aa15.62■□□□□ 0.09
CAPN1-214ENST00000528165 TRAFD1O14545 582 aaPredicted RBP15.62■□□□□ 0.09
CAPN1-214ENST00000528165 MAP3K13O43283 966 aa15.62■□□□□ 0.09
CAPN1-214ENST00000528165 RTN3O95197 1032 aaPredicted RBP15.62■□□□□ 0.09
CAPN1-214ENST00000528165 FAM86B2P0C5J1 330 aa15.62■□□□□ 0.09
CAPN1-214ENST00000528165 PTPN4P29074 926 aa15.62■□□□□ 0.09
CAPN1-214ENST00000528165 RFC5P40937 340 aa15.62■□□□□ 0.09
CAPN1-214ENST00000528165 NR1H3Q13133 447 aa15.62■□□□□ 0.09
CAPN1-214ENST00000528165 NSMFQ6X4W1 530 aa15.62■□□□□ 0.09
CAPN1-214ENST00000528165 KIAA0825Q8IV33 1275 aa15.62■□□□□ 0.09
CAPN1-214ENST00000528165 SLF2Q8IX21 1173 aa15.62■□□□□ 0.09
CAPN1-214ENST00000528165 ZFAND2BQ8WV99 257 aa15.62■□□□□ 0.09
CAPN1-214ENST00000528165 MAIP1Q8WWC4 291 aa15.62■□□□□ 0.09
CAPN1-214ENST00000528165 PSPC1Q8WXF1 523 aaKnown RBP15.62■□□□□ 0.09
CAPN1-214ENST00000528165 NMRK1Q9NWW6 199 aa15.62■□□□□ 0.09
CAPN1-214ENST00000528165 UBE4BO95155 1302 aa15.61■□□□□ 0.09
CAPN1-214ENST00000528165 EDF1O60869 148 aaKnown RBP15.61■□□□□ 0.09
CAPN1-214ENST00000528165 SGPL1O95470 568 aa15.61■□□□□ 0.09
CAPN1-214ENST00000528165 CYP1A2P05177 515 aa15.61■□□□□ 0.09
CAPN1-214ENST00000528165 VHLP40337 213 aa15.61■□□□□ 0.09
CAPN1-214ENST00000528165 TAF1BQ53T94 588 aaPredicted RBP15.61■□□□□ 0.09
CAPN1-214ENST00000528165 ZNF720Q7Z2F6 126 aa15.61■□□□□ 0.09
CAPN1-214ENST00000528165 SYCP3Q8IZU3 236 aa15.61■□□□□ 0.09
CAPN1-214ENST00000528165 LENG9Q96B70 501 aa15.61■□□□□ 0.09
CAPN1-214ENST00000528165 ZNF333Q96JL9 665 aa15.61■□□□□ 0.09
CAPN1-214ENST00000528165 UBN1Q9NPG3 1134 aa15.61■□□□□ 0.09
CAPN1-214ENST00000528165 UVRAGQ9P2Y5 699 aa15.61■□□□□ 0.09
CAPN1-214ENST00000528165 SCOCQ9UIL1 159 aa15.61■□□□□ 0.09
CAPN1-214ENST00000528165 ZFP69BQ9UJL9 534 aa15.61■□□□□ 0.09
CAPN1-214ENST00000528165 EMSYQ7Z589 1322 aa15.61■□□□□ 0.09
CAPN1-214ENST00000528165 MEIS2O14770 477 aa15.61■□□□□ 0.09
CAPN1-214ENST00000528165 CYP4F22Q6NT55 531 aa15.61■□□□□ 0.09
CAPN1-214ENST00000528165 RGS9BPQ6ZS82 235 aa15.61■□□□□ 0.09
CAPN1-214ENST00000528165 PRUNE1Q86TP1 453 aa15.61■□□□□ 0.09
CAPN1-214ENST00000528165 NOP9Q86U38 636 aaKnown RBP15.61■□□□□ 0.09
CAPN1-214ENST00000528165 SLC51AQ86UW1 340 aa15.61■□□□□ 0.09
CAPN1-214ENST00000528165 EPS8L1Q8TE68 723 aa15.61■□□□□ 0.09
CAPN1-214ENST00000528165 CRYGNQ8WXF5 182 aa15.61■□□□□ 0.09
CAPN1-214ENST00000528165 MAML1Q92585 1016 aa15.61■□□□□ 0.09
CAPN1-214ENST00000528165 WDR35Q9P2L0 1181 aa15.61■□□□□ 0.09
CAPN1-214ENST00000528165 GTF3C4Q9UKN8 822 aa15.61■□□□□ 0.09
CAPN1-214ENST00000528165 LRCH1Q9Y2L9 728 aa15.61■□□□□ 0.09
CAPN1-214ENST00000528165 TNRC6CQ9HCJ0 1690 aaKnown RBP15.6■□□□□ 0.09
CAPN1-214ENST00000528165 EXOC1LA0A1B0GW35 172 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms