RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 PP2D1A8MPX8 630 aa15.58■□□□□ 0.08
CAPN1-212ENST00000527887 H0YCG3 227 aa15.58■□□□□ 0.08
CAPN1-212ENST00000527887 TGM5O43548 720 aa15.58■□□□□ 0.08
CAPN1-212ENST00000527887 TRAPPC3O43617 180 aa15.58■□□□□ 0.08
CAPN1-212ENST00000527887 BRD1O95696 1058 aa15.58■□□□□ 0.08
CAPN1-212ENST00000527887 EDN1P05305 212 aa15.58■□□□□ 0.08
CAPN1-212ENST00000527887 MCF2P10911 925 aa15.58■□□□□ 0.08
CAPN1-212ENST00000527887 XKR4Q5GH76 650 aa15.58■□□□□ 0.08
CAPN1-212ENST00000527887 FAM171A1Q5VUB5 890 aa15.58■□□□□ 0.08
CAPN1-212ENST00000527887 LARP1BQ659C4 914 aaKnown RBP15.58■□□□□ 0.08
CAPN1-212ENST00000527887 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.58■□□□□ 0.08
CAPN1-212ENST00000527887 PALB2Q86YC2 1186 aa15.58■□□□□ 0.08
CAPN1-212ENST00000527887 DDX27Q96GQ7 796 aaKnown RBP15.58■□□□□ 0.08
CAPN1-212ENST00000527887 CDK5RAP3Q96JB5 506 aa15.58■□□□□ 0.08
CAPN1-212ENST00000527887 PPP1R10Q96QC0 940 aaKnown RBP15.58■□□□□ 0.08
CAPN1-212ENST00000527887 POLD4Q9HCU8 107 aa15.58■□□□□ 0.08
CAPN1-212ENST00000527887 PTPRHQ9HD43 1115 aa15.58■□□□□ 0.08
CAPN1-212ENST00000527887 SLC38A7Q9NVC3 462 aa15.58■□□□□ 0.08
CAPN1-212ENST00000527887 IGSF9Q9P2J2 1179 aa15.58■□□□□ 0.08
CAPN1-212ENST00000527887 GDAQ9Y2T3 454 aa15.58■□□□□ 0.08
CAPN1-212ENST00000527887 WDFY4Q6ZS81 3184 aa15.57■□□□□ 0.08
CAPN1-212ENST00000527887 VWA3AA6NCI4 1184 aa15.57■□□□□ 0.08
CAPN1-212ENST00000527887 KIF4AO95239 1232 aa15.57■□□□□ 0.08
CAPN1-212ENST00000527887 PLS3P13797 630 aa15.57■□□□□ 0.08
CAPN1-212ENST00000527887 PTPN5P54829 565 aa15.57■□□□□ 0.08
CAPN1-212ENST00000527887 NHLH1Q02575 133 aa15.57■□□□□ 0.08
CAPN1-212ENST00000527887 STRN3Q13033 797 aa15.57■□□□□ 0.08
CAPN1-212ENST00000527887 MAPK7Q13164 816 aa15.57■□□□□ 0.08
CAPN1-212ENST00000527887 RTP2Q5QGT7 225 aa15.57■□□□□ 0.08
CAPN1-212ENST00000527887 ALKAL1Q6UXT8 129 aa15.57■□□□□ 0.08
CAPN1-212ENST00000527887 KCNK18Q7Z418 384 aa15.57■□□□□ 0.08
CAPN1-212ENST00000527887 BRAPQ7Z569 592 aa15.57■□□□□ 0.08
CAPN1-212ENST00000527887 LNX1Q8TBB1 728 aaPredicted RBP15.57■□□□□ 0.08
CAPN1-212ENST00000527887 SMG7Q92540 1137 aaKnown RBP15.57■□□□□ 0.08
CAPN1-212ENST00000527887 KCNN1Q92952 543 aa15.57■□□□□ 0.08
CAPN1-212ENST00000527887 PAAF1Q9BRP4 392 aa15.57■□□□□ 0.08
CAPN1-212ENST00000527887 RUSC1Q9BVN2 902 aa15.57■□□□□ 0.08
CAPN1-212ENST00000527887 PRKD2Q9BZL6 878 aa15.57■□□□□ 0.08
CAPN1-212ENST00000527887 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.57■□□□□ 0.08
CAPN1-212ENST00000527887 LARSQ9P2J5 1176 aaKnown RBP15.57■□□□□ 0.08
CAPN1-212ENST00000527887 USP20Q9Y2K6 914 aa15.57■□□□□ 0.08
CAPN1-212ENST00000527887 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.57■□□□□ 0.08
CAPN1-212ENST00000527887 SMIM28A0A1B0GU29 152 aa15.56■□□□□ 0.08
CAPN1-212ENST00000527887 TOM1L1O75674 476 aa15.56■□□□□ 0.08
CAPN1-212ENST00000527887 ZMYND10O75800 440 aa15.56■□□□□ 0.08
CAPN1-212ENST00000527887 B3GAT3O94766 335 aa15.56■□□□□ 0.08
CAPN1-212ENST00000527887 CD2BP2O95400 341 aaKnown RBP15.56■□□□□ 0.08
CAPN1-212ENST00000527887 HNRNPA1P09651 372 aaKnown RBP eCLIP15.56■□□□□ 0.08
CAPN1-212ENST00000527887 PLA2G4BP0C869 781 aa15.56■□□□□ 0.08
CAPN1-212ENST00000527887 PDCP20941 246 aa15.56■□□□□ 0.08
CAPN1-212ENST00000527887 PROZP22891 400 aa15.56■□□□□ 0.08
CAPN1-212ENST00000527887 AVPR2P30518 371 aa15.56■□□□□ 0.08
CAPN1-212ENST00000527887 HOXA9P31269 272 aa15.56■□□□□ 0.08
CAPN1-212ENST00000527887 SLC12A3P55017 1021 aa15.56■□□□□ 0.08
CAPN1-212ENST00000527887 TDGQ13569 410 aa15.56■□□□□ 0.08
CAPN1-212ENST00000527887 BECN1Q14457 450 aa15.56■□□□□ 0.08
CAPN1-212ENST00000527887 ZRSR1Q15695 479 aaKnown RBP15.56■□□□□ 0.08
CAPN1-212ENST00000527887 PSMD5Q16401 504 aa15.56■□□□□ 0.08
CAPN1-212ENST00000527887 UPP1Q16831 310 aa15.56■□□□□ 0.08
CAPN1-212ENST00000527887 ZNF568Q3ZCX4 644 aa15.56■□□□□ 0.08
CAPN1-212ENST00000527887 MPZL3Q6UWV2 235 aa15.56■□□□□ 0.08
CAPN1-212ENST00000527887 ZPBP2Q6X784 338 aa15.56■□□□□ 0.08
CAPN1-212ENST00000527887 CEP57Q86XR8 500 aa15.56■□□□□ 0.08
CAPN1-212ENST00000527887 RABGGTAQ92696 567 aa15.56■□□□□ 0.08
CAPN1-212ENST00000527887 ACAP3Q96P50 834 aa15.56■□□□□ 0.08
CAPN1-212ENST00000527887 PNMA5Q96PV4 448 aa15.56■□□□□ 0.08
CAPN1-212ENST00000527887 CLSTN3Q9BQT9 956 aa15.56■□□□□ 0.08
CAPN1-212ENST00000527887 TCHPQ9BT92 498 aa15.56■□□□□ 0.08
CAPN1-212ENST00000527887 TARS2Q9BW92 718 aaKnown RBP15.56■□□□□ 0.08
CAPN1-212ENST00000527887 CDT1Q9H211 546 aa15.56■□□□□ 0.08
CAPN1-212ENST00000527887 PIDD1Q9HB75 910 aa15.56■□□□□ 0.08
CAPN1-212ENST00000527887 EPS15L1Q9UBC2 864 aa15.56■□□□□ 0.08
CAPN1-212ENST00000527887 ZFP37Q9Y6Q3 630 aaPredicted RBP15.56■□□□□ 0.08
CAPN1-212ENST00000527887 CLUHO75153 1309 aa15.55■□□□□ 0.08
CAPN1-212ENST00000527887 RFPL2O75678 378 aa15.55■□□□□ 0.08
CAPN1-212ENST00000527887 KCNE1P15382 129 aa15.55■□□□□ 0.08
CAPN1-212ENST00000527887 FGFR3P22607 806 aa15.55■□□□□ 0.08
CAPN1-212ENST00000527887 RPL9P32969 192 aaKnown RBP15.55■□□□□ 0.08
CAPN1-212ENST00000527887 ABCD1P33897 745 aa15.55■□□□□ 0.08
CAPN1-212ENST00000527887 UBA7P41226 1012 aa15.55■□□□□ 0.08
CAPN1-212ENST00000527887 UVSSAQ2YD98 709 aa15.55■□□□□ 0.08
CAPN1-212ENST00000527887 TMEM119Q4V9L6 283 aa15.55■□□□□ 0.08
CAPN1-212ENST00000527887 LIN9Q5TKA1 542 aa15.55■□□□□ 0.08
CAPN1-212ENST00000527887 TAS1R3Q7RTX0 852 aa15.55■□□□□ 0.08
CAPN1-212ENST00000527887 TMEM161BQ8NDZ6 487 aa15.55■□□□□ 0.08
CAPN1-212ENST00000527887 SNX21Q969T3 373 aa15.55■□□□□ 0.08
CAPN1-212ENST00000527887 ZNF707Q96C28 371 aaPredicted RBP15.55■□□□□ 0.08
CAPN1-212ENST00000527887 CALML4Q96GE6 196 aa15.55■□□□□ 0.08
CAPN1-212ENST00000527887 B3GALT6Q96L58 329 aa15.55■□□□□ 0.08
CAPN1-212ENST00000527887 KCNK12Q9HB15 430 aa15.55■□□□□ 0.08
CAPN1-212ENST00000527887 FBXW11Q9UKB1 542 aa15.55■□□□□ 0.08
CAPN1-212ENST00000527887 ODF2LQ9ULJ1 636 aa15.55■□□□□ 0.08
CAPN1-212ENST00000527887 BACE2Q9Y5Z0 518 aa15.55■□□□□ 0.08
CAPN1-212ENST00000527887 ZNF318Q5VUA4 2279 aa15.54■□□□□ 0.08
CAPN1-212ENST00000527887 SLC16A4O15374 487 aa15.54■□□□□ 0.08
CAPN1-212ENST00000527887 ASGR2P07307 311 aa15.54■□□□□ 0.08
CAPN1-212ENST00000527887 POU2F2P09086 479 aa15.54■□□□□ 0.08
CAPN1-212ENST00000527887 SPATA31D3P0C874 917 aa15.54■□□□□ 0.08
CAPN1-212ENST00000527887 RPL17P18621 184 aaKnown RBP15.54■□□□□ 0.08
CAPN1-212ENST00000527887 LONP1P36776 959 aaKnown RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms