RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 KCNG4Q8TDN1 519 aa28.85■■■□□ 2.21
TSPAN4-217ENST00000527644 DDX12PQ92771 950 aa28.85■■■□□ 2.21
TSPAN4-217ENST00000527644 PPP1R10Q96QC0 940 aaKnown RBP28.85■■■□□ 2.21
TSPAN4-217ENST00000527644 FIZ1Q96SL8 496 aa28.85■■■□□ 2.21
TSPAN4-217ENST00000527644 CFAP45Q9UL16 551 aa28.85■■■□□ 2.21
TSPAN4-217ENST00000527644 A0A087X0B3 334 aa28.84■■■□□ 2.21
TSPAN4-217ENST00000527644 MYMKA6NI61 221 aa28.84■■■□□ 2.21
TSPAN4-217ENST00000527644 HARSP12081 509 aaKnown RBP28.84■■■□□ 2.21
TSPAN4-217ENST00000527644 GLUD2P49448 558 aa28.84■■■□□ 2.21
TSPAN4-217ENST00000527644 MCL1Q07820 350 aa28.84■■■□□ 2.21
TSPAN4-217ENST00000527644 KIAA0319Q5VV43 1072 aa28.84■■■□□ 2.21
TSPAN4-217ENST00000527644 RABGGTAQ92696 567 aa28.84■■■□□ 2.21
TSPAN4-217ENST00000527644 KLHL5Q96PQ7 755 aa28.84■■■□□ 2.21
TSPAN4-217ENST00000527644 PAAF1Q9BRP4 392 aa28.84■■■□□ 2.21
TSPAN4-217ENST00000527644 CHST7Q9NS84 486 aa28.84■■■□□ 2.21
TSPAN4-217ENST00000527644 CACNG4Q9UBN1 327 aa28.84■■■□□ 2.21
TSPAN4-217ENST00000527644 SMIM28A0A1B0GU29 152 aa28.83■■■□□ 2.21
TSPAN4-217ENST00000527644 PIGRP01833 764 aa28.83■■■□□ 2.21
TSPAN4-217ENST00000527644 LIG4P49917 911 aa28.83■■■□□ 2.21
TSPAN4-217ENST00000527644 GTF2BQ00403 316 aa28.83■■■□□ 2.21
TSPAN4-217ENST00000527644 DSG1Q02413 1049 aa28.83■■■□□ 2.21
TSPAN4-217ENST00000527644 GLRA4Q5JXX5 417 aa28.83■■■□□ 2.21
TSPAN4-217ENST00000527644 KIAA1841Q6NSI8 718 aa28.83■■■□□ 2.21
TSPAN4-217ENST00000527644 SYCE2Q6PIF2 218 aa28.83■■■□□ 2.21
TSPAN4-217ENST00000527644 ADHFE1Q8IWW8 467 aa28.83■■■□□ 2.21
TSPAN4-217ENST00000527644 GJD3Q8N144 294 aa28.83■■■□□ 2.21
TSPAN4-217ENST00000527644 SLC22A17Q8WUG5 538 aa28.83■■■□□ 2.21
TSPAN4-217ENST00000527644 GPR62Q9BZJ7 368 aa28.83■■■□□ 2.21
TSPAN4-217ENST00000527644 S1PR5Q9H228 398 aa28.83■■■□□ 2.21
TSPAN4-217ENST00000527644 ST6GALNAC4Q9H4F1 302 aa28.83■■■□□ 2.21
TSPAN4-217ENST00000527644 USP15Q9Y4E8 981 aaPredicted RBP28.83■■■□□ 2.21
TSPAN4-217ENST00000527644 CNPP09543 421 aaKnown RBP28.82■■■□□ 2.2
TSPAN4-217ENST00000527644 KLRC2P26717 231 aa28.82■■■□□ 2.2
TSPAN4-217ENST00000527644 NMT1P30419 496 aaKnown RBP28.82■■■□□ 2.2
TSPAN4-217ENST00000527644 MATR3P43243 847 aaKnown RBP eCLIP28.82■■■□□ 2.2
TSPAN4-217ENST00000527644 ZP2Q05996 745 aa28.82■■■□□ 2.2
TSPAN4-217ENST00000527644 USP41Q3LFD5 358 aa28.82■■■□□ 2.2
TSPAN4-217ENST00000527644 TPRNQ4KMQ1 711 aa28.82■■■□□ 2.2
TSPAN4-217ENST00000527644 GPR65Q8IYL9 337 aa28.82■■■□□ 2.2
TSPAN4-217ENST00000527644 PDILTQ8N807 584 aa28.82■■■□□ 2.2
TSPAN4-217ENST00000527644 DNAJC19Q96DA6 116 aa28.82■■■□□ 2.2
TSPAN4-217ENST00000527644 SNX27Q96L92 541 aa28.82■■■□□ 2.2
TSPAN4-217ENST00000527644 UROC1Q96N76 676 aa28.82■■■□□ 2.2
TSPAN4-217ENST00000527644 SEL1LQ9UBV2 794 aa28.82■■■□□ 2.2
TSPAN4-217ENST00000527644 SF3B1O75533 1304 aaKnown RBP eCLIP28.82■■■□□ 2.2
TSPAN4-217ENST00000527644 C2CD2LO14523 706 aa28.81■■■□□ 2.2
TSPAN4-217ENST00000527644 HNRNPDLO14979 420 aaKnown RBP28.81■■■□□ 2.2
TSPAN4-217ENST00000527644 POP1Q99575 1024 aaKnown RBP28.81■■■□□ 2.2
TSPAN4-217ENST00000527644 RXFP1Q9HBX9 757 aa28.81■■■□□ 2.2
TSPAN4-217ENST00000527644 CD320Q9NPF0 282 aa28.81■■■□□ 2.2
TSPAN4-217ENST00000527644 SLC38A7Q9NVC3 462 aa28.81■■■□□ 2.2
TSPAN4-217ENST00000527644 DZANK1Q9NVP4 752 aa28.81■■■□□ 2.2
TSPAN4-217ENST00000527644 KIF4AO95239 1232 aa28.8■■■□□ 2.2
TSPAN4-217ENST00000527644 KCNE1P15382 129 aa28.8■■■□□ 2.2
TSPAN4-217ENST00000527644 GAP43P17677 238 aa28.8■■■□□ 2.2
TSPAN4-217ENST00000527644 SSTR3P32745 418 aaPredicted RBP28.8■■■□□ 2.2
TSPAN4-217ENST00000527644 DNM1Q05193 864 aaKnown RBP28.8■■■□□ 2.2
TSPAN4-217ENST00000527644 AXDND1Q5T1B0 1012 aaPredicted RBP28.8■■■□□ 2.2
TSPAN4-217ENST00000527644 SHC4Q6S5L8 630 aa28.8■■■□□ 2.2
TSPAN4-217ENST00000527644 ZNF720Q7Z2F6 126 aa28.8■■■□□ 2.2
TSPAN4-217ENST00000527644 SFR1Q86XK3 245 aa28.8■■■□□ 2.2
TSPAN4-217ENST00000527644 MAP4K3Q8IVH8 894 aa28.8■■■□□ 2.2
TSPAN4-217ENST00000527644 SUSD6Q92537 303 aa28.8■■■□□ 2.2
TSPAN4-217ENST00000527644 HAPLN2Q9GZV7 340 aa28.8■■■□□ 2.2
TSPAN4-217ENST00000527644 CNTN3Q9P232 1028 aa28.8■■■□□ 2.2
TSPAN4-217ENST00000527644 TRIP11Q15643 1979 aa28.8■■■□□ 2.2
TSPAN4-217ENST00000527644 C19orf67A6NJJ6 358 aa28.79■■■□□ 2.2
TSPAN4-217ENST00000527644 EPCAMP16422 314 aa28.79■■■□□ 2.2
TSPAN4-217ENST00000527644 CLCN4P51793 760 aa28.79■■■□□ 2.2
TSPAN4-217ENST00000527644 ELAVL2Q12926 359 aaKnown RBP28.79■■■□□ 2.2
TSPAN4-217ENST00000527644 KYAT1Q16773 422 aa28.79■■■□□ 2.2
TSPAN4-217ENST00000527644 DCLRE1AQ6PJP8 1040 aa28.79■■■□□ 2.2
TSPAN4-217ENST00000527644 HASPINQ8TF76 798 aa28.79■■■□□ 2.2
TSPAN4-217ENST00000527644 CUEDC2Q9H467 287 aa28.79■■■□□ 2.2
TSPAN4-217ENST00000527644 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP28.79■■■□□ 2.2
TSPAN4-217ENST00000527644 RCOR1Q9UKL0 485 aa28.79■■■□□ 2.2
TSPAN4-217ENST00000527644 TMEM189-UBE2V1I3L0A0 370 aa28.78■■■□□ 2.2
TSPAN4-217ENST00000527644 ADH1AP07327 375 aa28.78■■■□□ 2.2
TSPAN4-217ENST00000527644 CLTAP09496 248 aa28.78■■■□□ 2.2
TSPAN4-217ENST00000527644 ME1P48163 572 aa28.78■■■□□ 2.2
TSPAN4-217ENST00000527644 ITIH3Q06033 890 aa28.78■■■□□ 2.2
TSPAN4-217ENST00000527644 E2F4Q16254 413 aa28.78■■■□□ 2.2
TSPAN4-217ENST00000527644 SLC10A6Q3KNW5 377 aa28.78■■■□□ 2.2
TSPAN4-217ENST00000527644 SEZ6Q53EL9 994 aa28.78■■■□□ 2.2
TSPAN4-217ENST00000527644 ZC2HC1CQ53FD0 456 aaPredicted RBP28.78■■■□□ 2.2
TSPAN4-217ENST00000527644 HVCN1Q96D96 273 aa28.78■■■□□ 2.2
TSPAN4-217ENST00000527644 DDX27Q96GQ7 796 aaKnown RBP28.78■■■□□ 2.2
TSPAN4-217ENST00000527644 ZMAT2Q96NC0 199 aaKnown RBP28.78■■■□□ 2.2
TSPAN4-217ENST00000527644 LRRC27Q9C0I9 530 aa28.78■■■□□ 2.2
TSPAN4-217ENST00000527644 TNMDQ9H2S6 317 aa28.78■■■□□ 2.2
TSPAN4-217ENST00000527644 PLEKHA5Q9HAU0 1116 aa28.78■■■□□ 2.2
TSPAN4-217ENST00000527644 PCDHA7Q9UN72 937 aa28.78■■■□□ 2.2
TSPAN4-217ENST00000527644 TEX28O15482 410 aa28.77■■■□□ 2.2
TSPAN4-217ENST00000527644 CLCNKBP51801 687 aa28.77■■■□□ 2.2
TSPAN4-217ENST00000527644 UPP1Q16831 310 aa28.77■■■□□ 2.2
TSPAN4-217ENST00000527644 CES5AQ6NT32 575 aa28.77■■■□□ 2.2
TSPAN4-217ENST00000527644 IQUBQ8NA54 791 aa28.77■■■□□ 2.2
TSPAN4-217ENST00000527644 RIN2Q8WYP3 895 aaPredicted RBP28.77■■■□□ 2.2
TSPAN4-217ENST00000527644 B3GALT6Q96L58 329 aa28.77■■■□□ 2.2
TSPAN4-217ENST00000527644 APOL5Q9BWW9 433 aa28.77■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms