RNA–Protein interactions for RNA: ENST00000527409.1

LMNB2-204, Transcript of lamin B2, humanhuman

TSL 5

Gene LMNB2, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-204ENST00000527409 CXCL16Q9H2A7 254 aa24.62■■□□□ 1.53
LMNB2-204ENST00000527409 SEL1LQ9UBV2 794 aa24.62■■□□□ 1.53
LMNB2-204ENST00000527409 CFAP45Q9UL16 551 aa24.62■■□□□ 1.53
LMNB2-204ENST00000527409 C5orf42Q9H799 3197 aa24.62■■□□□ 1.53
LMNB2-204ENST00000527409 PDCD11Q14690 1871 aaKnown RBP24.62■■□□□ 1.53
LMNB2-204ENST00000527409 SF3B1O75533 1304 aaKnown RBP eCLIP24.61■■□□□ 1.53
LMNB2-204ENST00000527409 A0A087X0B3 334 aa24.61■■□□□ 1.53
LMNB2-204ENST00000527409 HNRNPDLO14979 420 aaKnown RBP24.61■■□□□ 1.53
LMNB2-204ENST00000527409 LILRB3O75022 631 aa24.61■■□□□ 1.53
LMNB2-204ENST00000527409 TADA2AO75478 443 aa24.61■■□□□ 1.53
LMNB2-204ENST00000527409 PIGRP01833 764 aa24.61■■□□□ 1.53
LMNB2-204ENST00000527409 HARSP12081 509 aaKnown RBP24.61■■□□□ 1.53
LMNB2-204ENST00000527409 LIG4P49917 911 aa24.61■■□□□ 1.53
LMNB2-204ENST00000527409 DSG1Q02413 1049 aa24.61■■□□□ 1.53
LMNB2-204ENST00000527409 FOXD4L6Q3SYB3 417 aaPredicted RBP24.61■■□□□ 1.53
LMNB2-204ENST00000527409 GLRA4Q5JXX5 417 aa24.61■■□□□ 1.53
LMNB2-204ENST00000527409 ALKAL1Q6UXT8 129 aa24.61■■□□□ 1.53
LMNB2-204ENST00000527409 FOXD4L3Q6VB84 417 aaPredicted RBP24.61■■□□□ 1.53
LMNB2-204ENST00000527409 ADHFE1Q8IWW8 467 aa24.61■■□□□ 1.53
LMNB2-204ENST00000527409 GPR65Q8IYL9 337 aa24.61■■□□□ 1.53
LMNB2-204ENST00000527409 SNX27Q96L92 541 aa24.61■■□□□ 1.53
LMNB2-204ENST00000527409 UROC1Q96N76 676 aa24.61■■□□□ 1.53
LMNB2-204ENST00000527409 POP1Q99575 1024 aaKnown RBP24.61■■□□□ 1.53
LMNB2-204ENST00000527409 PAAF1Q9BRP4 392 aa24.61■■□□□ 1.53
LMNB2-204ENST00000527409 ST6GALNAC4Q9H4F1 302 aa24.61■■□□□ 1.53
LMNB2-204ENST00000527409 CHST7Q9NS84 486 aa24.61■■□□□ 1.53
LMNB2-204ENST00000527409 DZANK1Q9NVP4 752 aa24.61■■□□□ 1.53
LMNB2-204ENST00000527409 USP15Q9Y4E8 981 aaPredicted RBP24.61■■□□□ 1.53
LMNB2-204ENST00000527409 SMIM28A0A1B0GU29 152 aa24.6■■□□□ 1.53
LMNB2-204ENST00000527409 MYMKA6NI61 221 aa24.6■■□□□ 1.53
LMNB2-204ENST00000527409 CNPP09543 421 aaKnown RBP24.6■■□□□ 1.53
LMNB2-204ENST00000527409 GAP43P17677 238 aa24.6■■□□□ 1.53
LMNB2-204ENST00000527409 MATR3P43243 847 aaKnown RBP eCLIP24.6■■□□□ 1.53
LMNB2-204ENST00000527409 GTF2BQ00403 316 aa24.6■■□□□ 1.53
LMNB2-204ENST00000527409 ZP2Q05996 745 aa24.6■■□□□ 1.53
LMNB2-204ENST00000527409 USP41Q3LFD5 358 aa24.6■■□□□ 1.53
LMNB2-204ENST00000527409 TPRNQ4KMQ1 711 aa24.6■■□□□ 1.53
LMNB2-204ENST00000527409 KIAA0319Q5VV43 1072 aa24.6■■□□□ 1.53
LMNB2-204ENST00000527409 KIAA1841Q6NSI8 718 aa24.6■■□□□ 1.53
LMNB2-204ENST00000527409 TAS1R1Q7RTX1 841 aa24.6■■□□□ 1.53
LMNB2-204ENST00000527409 MAP4K3Q8IVH8 894 aa24.6■■□□□ 1.53
LMNB2-204ENST00000527409 GJD3Q8N144 294 aa24.6■■□□□ 1.53
LMNB2-204ENST00000527409 PDILTQ8N807 584 aa24.6■■□□□ 1.53
LMNB2-204ENST00000527409 RABGGTAQ92696 567 aa24.6■■□□□ 1.53
LMNB2-204ENST00000527409 KLHL5Q96PQ7 755 aa24.6■■□□□ 1.53
LMNB2-204ENST00000527409 PANK2Q9BZ23 570 aa24.6■■□□□ 1.53
LMNB2-204ENST00000527409 GPR62Q9BZJ7 368 aa24.6■■□□□ 1.53
LMNB2-204ENST00000527409 SLC38A7Q9NVC3 462 aa24.6■■□□□ 1.53
LMNB2-204ENST00000527409 CACNG4Q9UBN1 327 aa24.6■■□□□ 1.53
LMNB2-204ENST00000527409 C2CD2LO14523 706 aa24.59■■□□□ 1.53
LMNB2-204ENST00000527409 KIF4AO95239 1232 aa24.59■■□□□ 1.53
LMNB2-204ENST00000527409 NMT1P30419 496 aaKnown RBP24.59■■□□□ 1.53
LMNB2-204ENST00000527409 KYAT1Q16773 422 aa24.59■■□□□ 1.53
LMNB2-204ENST00000527409 SYCE2Q6PIF2 218 aa24.59■■□□□ 1.53
LMNB2-204ENST00000527409 SFR1Q86XK3 245 aa24.59■■□□□ 1.53
LMNB2-204ENST00000527409 SLC22A17Q8WUG5 538 aa24.59■■□□□ 1.53
LMNB2-204ENST00000527409 DNAJC19Q96DA6 116 aa24.59■■□□□ 1.53
LMNB2-204ENST00000527409 CUEDC2Q9H467 287 aa24.59■■□□□ 1.53
LMNB2-204ENST00000527409 CNTN3Q9P232 1028 aa24.59■■□□□ 1.53
LMNB2-204ENST00000527409 TMEM189-UBE2V1I3L0A0 370 aa24.58■■□□□ 1.53
LMNB2-204ENST00000527409 ADH1AP07327 375 aa24.58■■□□□ 1.53
LMNB2-204ENST00000527409 KCNE1P15382 129 aa24.58■■□□□ 1.53
LMNB2-204ENST00000527409 KLRC2P26717 231 aa24.58■■□□□ 1.53
LMNB2-204ENST00000527409 SSTR3P32745 418 aaPredicted RBP24.58■■□□□ 1.53
LMNB2-204ENST00000527409 CREMQ03060 361 aa24.58■■□□□ 1.53
LMNB2-204ENST00000527409 DNM1Q05193 864 aaKnown RBP24.58■■□□□ 1.53
LMNB2-204ENST00000527409 ELAVL2Q12926 359 aaKnown RBP24.58■■□□□ 1.53
LMNB2-204ENST00000527409 SHC4Q6S5L8 630 aa24.58■■□□□ 1.53
LMNB2-204ENST00000527409 SUSD6Q92537 303 aa24.58■■□□□ 1.53
LMNB2-204ENST00000527409 HVCN1Q96D96 273 aa24.58■■□□□ 1.53
LMNB2-204ENST00000527409 LRRC27Q9C0I9 530 aa24.58■■□□□ 1.53
LMNB2-204ENST00000527409 S1PR5Q9H228 398 aa24.58■■□□□ 1.53
LMNB2-204ENST00000527409 RXFP1Q9HBX9 757 aa24.58■■□□□ 1.53
LMNB2-204ENST00000527409 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP24.58■■□□□ 1.53
LMNB2-204ENST00000527409 C19orf67A6NJJ6 358 aa24.57■■□□□ 1.52
LMNB2-204ENST00000527409 CLTAP09496 248 aa24.57■■□□□ 1.52
LMNB2-204ENST00000527409 EPCAMP16422 314 aa24.57■■□□□ 1.52
LMNB2-204ENST00000527409 ME1P48163 572 aa24.57■■□□□ 1.52
LMNB2-204ENST00000527409 CLCN4P51793 760 aa24.57■■□□□ 1.52
LMNB2-204ENST00000527409 ITIH3Q06033 890 aa24.57■■□□□ 1.52
LMNB2-204ENST00000527409 AXDND1Q5T1B0 1012 aaPredicted RBP24.57■■□□□ 1.52
LMNB2-204ENST00000527409 ZNF720Q7Z2F6 126 aa24.57■■□□□ 1.52
LMNB2-204ENST00000527409 HASPINQ8TF76 798 aa24.57■■□□□ 1.52
LMNB2-204ENST00000527409 HAPLN2Q9GZV7 340 aa24.57■■□□□ 1.52
LMNB2-204ENST00000527409 TNMDQ9H2S6 317 aa24.57■■□□□ 1.52
LMNB2-204ENST00000527409 CD320Q9NPF0 282 aa24.57■■□□□ 1.52
LMNB2-204ENST00000527409 BECN1Q14457 450 aa24.56■■□□□ 1.52
LMNB2-204ENST00000527409 E2F4Q16254 413 aa24.56■■□□□ 1.52
LMNB2-204ENST00000527409 UPP1Q16831 310 aa24.56■■□□□ 1.52
LMNB2-204ENST00000527409 ZC2HC1CQ53FD0 456 aaPredicted RBP24.56■■□□□ 1.52
LMNB2-204ENST00000527409 CES5AQ6NT32 575 aa24.56■■□□□ 1.52
LMNB2-204ENST00000527409 DCLRE1AQ6PJP8 1040 aa24.56■■□□□ 1.52
LMNB2-204ENST00000527409 IQUBQ8NA54 791 aa24.56■■□□□ 1.52
LMNB2-204ENST00000527409 DDX27Q96GQ7 796 aaKnown RBP24.56■■□□□ 1.52
LMNB2-204ENST00000527409 MRPL44Q9H9J2 332 aaKnown RBP24.56■■□□□ 1.52
LMNB2-204ENST00000527409 PLEKHA5Q9HAU0 1116 aa24.56■■□□□ 1.52
LMNB2-204ENST00000527409 OLFML3Q9NRN5 406 aa24.56■■□□□ 1.52
LMNB2-204ENST00000527409 PLXNA3P51805 1871 aa24.55■■□□□ 1.52
LMNB2-204ENST00000527409 FRMD3A2A2Y4 597 aa24.55■■□□□ 1.52
LMNB2-204ENST00000527409 OGTO15294 1046 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms