RNA–Protein interactions for RNA: ENST00000527025.5

CCDC90B-208, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 777 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-208ENST00000527025 UBN1Q9NPG3 1134 aa9.73□□□□□ -0.85
CCDC90B-208ENST00000527025 KBTBD4Q9NVX7 518 aa9.73□□□□□ -0.85
CCDC90B-208ENST00000527025 STK17AQ9UEE5 414 aa9.73□□□□□ -0.85
CCDC90B-208ENST00000527025 CCDC39Q9UFE4 941 aa9.73□□□□□ -0.85
CCDC90B-208ENST00000527025 CFAP45Q9UL16 551 aa9.73□□□□□ -0.85
CCDC90B-208ENST00000527025 ODF2LQ9ULJ1 636 aa9.73□□□□□ -0.85
CCDC90B-208ENST00000527025 TBX20Q9UMR3 447 aa9.73□□□□□ -0.85
CCDC90B-208ENST00000527025 LZTS1Q9Y250 596 aa9.73□□□□□ -0.85
CCDC90B-208ENST00000527025 PDCD11Q14690 1871 aaKnown RBP9.72□□□□□ -0.85
CCDC90B-208ENST00000527025 FRMD3A2A2Y4 597 aa9.72□□□□□ -0.85
CCDC90B-208ENST00000527025 C2orf71A6NGG8 1288 aa9.72□□□□□ -0.85
CCDC90B-208ENST00000527025 ANKRD63C9JTQ0 380 aa9.72□□□□□ -0.85
CCDC90B-208ENST00000527025 TRAK2O60296 914 aa9.72□□□□□ -0.85
CCDC90B-208ENST00000527025 ALDH2P05091 517 aa9.72□□□□□ -0.85
CCDC90B-208ENST00000527025 STAT6P42226 847 aa9.72□□□□□ -0.85
CCDC90B-208ENST00000527025 MRPS5P82675 430 aaKnown RBP9.72□□□□□ -0.85
CCDC90B-208ENST00000527025 GTF2BQ00403 316 aa9.72□□□□□ -0.85
CCDC90B-208ENST00000527025 SOX4Q06945 474 aaPredicted RBP9.72□□□□□ -0.85
CCDC90B-208ENST00000527025 DSG2Q14126 1118 aa9.72□□□□□ -0.85
CCDC90B-208ENST00000527025 CSPP1Q1MSJ5 1256 aa9.72□□□□□ -0.85
CCDC90B-208ENST00000527025 XKR4Q5GH76 650 aa9.72□□□□□ -0.85
CCDC90B-208ENST00000527025 GLRA4Q5JXX5 417 aa9.72□□□□□ -0.85
CCDC90B-208ENST00000527025 PLPP4Q5VZY2 271 aa9.72□□□□□ -0.85
CCDC90B-208ENST00000527025 RESP18Q5W5W9 173 aa9.72□□□□□ -0.85
CCDC90B-208ENST00000527025 SV2BQ7L1I2 683 aa9.72□□□□□ -0.85
CCDC90B-208ENST00000527025 ZNF720Q7Z2F6 126 aa9.72□□□□□ -0.85
CCDC90B-208ENST00000527025 DDX53Q86TM3 631 aaKnown RBP9.72□□□□□ -0.85
CCDC90B-208ENST00000527025 SFR1Q86XK3 245 aa9.72□□□□□ -0.85
CCDC90B-208ENST00000527025 RNF168Q8IYW5 571 aaPredicted RBP9.72□□□□□ -0.85
CCDC90B-208ENST00000527025 VPS52Q8N1B4 723 aa9.72□□□□□ -0.85
CCDC90B-208ENST00000527025 ZSWIM2Q8NEG5 633 aa9.72□□□□□ -0.85
CCDC90B-208ENST00000527025 URGCPQ8TCY9 931 aa9.72□□□□□ -0.85
CCDC90B-208ENST00000527025 MICAL1Q8TDZ2 1067 aa9.72□□□□□ -0.85
CCDC90B-208ENST00000527025 DHX58Q96C10 678 aa9.72□□□□□ -0.85
CCDC90B-208ENST00000527025 B3GALT6Q96L58 329 aa9.72□□□□□ -0.85
CCDC90B-208ENST00000527025 PPP1R10Q96QC0 940 aaKnown RBP9.72□□□□□ -0.85
CCDC90B-208ENST00000527025 TMEM175Q9BSA9 504 aa9.72□□□□□ -0.85
CCDC90B-208ENST00000527025 GPR62Q9BZJ7 368 aa9.72□□□□□ -0.85
CCDC90B-208ENST00000527025 ZBP1Q9H171 429 aa9.72□□□□□ -0.85
CCDC90B-208ENST00000527025 ZHX3Q9H4I2 956 aa9.72□□□□□ -0.85
CCDC90B-208ENST00000527025 PARVGQ9HBI0 331 aa9.72□□□□□ -0.85
CCDC90B-208ENST00000527025 GDPD2Q9HCC8 539 aa9.72□□□□□ -0.85
CCDC90B-208ENST00000527025 CLDND1Q9NY35 253 aa9.72□□□□□ -0.85
CCDC90B-208ENST00000527025 TBC1D7Q9P0N9 293 aa9.72□□□□□ -0.85
CCDC90B-208ENST00000527025 LARSQ9P2J5 1176 aaKnown RBP9.72□□□□□ -0.85
CCDC90B-208ENST00000527025 KANSL3Q9P2N6 904 aa9.72□□□□□ -0.85
CCDC90B-208ENST00000527025 COG5Q9UP83 839 aa9.72□□□□□ -0.85
CCDC90B-208ENST00000527025 FAN1Q9Y2M0 1017 aa9.72□□□□□ -0.85
CCDC90B-208ENST00000527025 PRG3Q9Y2Y8 225 aaPredicted RBP9.72□□□□□ -0.85
CCDC90B-208ENST00000527025 ANK1P16157 1881 aa9.71□□□□□ -0.85
CCDC90B-208ENST00000527025 SMIM28A0A1B0GU29 152 aa9.71□□□□□ -0.86
CCDC90B-208ENST00000527025 CASTOR2A6NHX0 329 aa9.71□□□□□ -0.86
CCDC90B-208ENST00000527025 TK2O00142 265 aa9.71□□□□□ -0.86
CCDC90B-208ENST00000527025 POLR2DO15514 142 aaKnown RBP9.71□□□□□ -0.86
CCDC90B-208ENST00000527025 FAM13AO94988 1023 aa9.71□□□□□ -0.86
CCDC90B-208ENST00000527025 CXCL14O95715 111 aa9.71□□□□□ -0.86
CCDC90B-208ENST00000527025 KRT18P05783 430 aaKnown RBP9.71□□□□□ -0.86
CCDC90B-208ENST00000527025 HARSP12081 509 aaKnown RBP9.71□□□□□ -0.86
CCDC90B-208ENST00000527025 IL9P15248 144 aa9.71□□□□□ -0.86
CCDC90B-208ENST00000527025 HOXD13P35453 343 aa9.71□□□□□ -0.86
CCDC90B-208ENST00000527025 PPM1AP35813 382 aa9.71□□□□□ -0.86
CCDC90B-208ENST00000527025 TNFSF9P41273 254 aa9.71□□□□□ -0.86
CCDC90B-208ENST00000527025 GRM5P41594 1212 aa9.71□□□□□ -0.86
CCDC90B-208ENST00000527025 OR1G1P47890 313 aa9.71□□□□□ -0.86
CCDC90B-208ENST00000527025 ME1P48163 572 aa9.71□□□□□ -0.86
CCDC90B-208ENST00000527025 SMTNP53814 917 aa9.71□□□□□ -0.86
CCDC90B-208ENST00000527025 KRT17Q04695 432 aa9.71□□□□□ -0.86
CCDC90B-208ENST00000527025 SPAG1Q07617 926 aa9.71□□□□□ -0.86
CCDC90B-208ENST00000527025 CLUL1Q15846 466 aa9.71□□□□□ -0.86
CCDC90B-208ENST00000527025 DUSP6Q16828 381 aa9.71□□□□□ -0.86
CCDC90B-208ENST00000527025 TMEM132AQ24JP5 1023 aa9.71□□□□□ -0.86
CCDC90B-208ENST00000527025 SLC10A6Q3KNW5 377 aa9.71□□□□□ -0.86
CCDC90B-208ENST00000527025 DCAF4L1Q3SXM0 396 aa9.71□□□□□ -0.86
CCDC90B-208ENST00000527025 LEXMQ3ZCV2 418 aa9.71□□□□□ -0.86
CCDC90B-208ENST00000527025 ZNF568Q3ZCX4 644 aa9.71□□□□□ -0.86
CCDC90B-208ENST00000527025 TJAP1Q5JTD0 557 aa9.71□□□□□ -0.86
CCDC90B-208ENST00000527025 KANK3Q6NY19 840 aa9.71□□□□□ -0.86
CCDC90B-208ENST00000527025 MPZL3Q6UWV2 235 aa9.71□□□□□ -0.86
CCDC90B-208ENST00000527025 ZPBP2Q6X784 338 aa9.71□□□□□ -0.86
CCDC90B-208ENST00000527025 CCDC73Q6ZRK6 1079 aa9.71□□□□□ -0.86
CCDC90B-208ENST00000527025 CLEC17AQ6ZS10 378 aa9.71□□□□□ -0.86
CCDC90B-208ENST00000527025 GRAMD1CQ8IYS0 662 aa9.71□□□□□ -0.86
CCDC90B-208ENST00000527025 EFHBQ8N7U6 833 aa9.71□□□□□ -0.86
CCDC90B-208ENST00000527025 C3orf58Q8NDZ4 430 aa9.71□□□□□ -0.86
CCDC90B-208ENST00000527025 MSLNLQ96KJ4 702 aa9.71□□□□□ -0.86
CCDC90B-208ENST00000527025 SPATA32Q96LK8 384 aa9.71□□□□□ -0.86
CCDC90B-208ENST00000527025 SCAND2PQ9GZW5 306 aaPredicted RBP9.71□□□□□ -0.86
CCDC90B-208ENST00000527025 TLE6Q9H808 572 aa9.71□□□□□ -0.86
CCDC90B-208ENST00000527025 GOLGA2P5Q9HBQ8 144 aa9.71□□□□□ -0.86
CCDC90B-208ENST00000527025 CD320Q9NPF0 282 aa9.71□□□□□ -0.86
CCDC90B-208ENST00000527025 CDH22Q9UJ99 828 aa9.71□□□□□ -0.86
CCDC90B-208ENST00000527025 BARX2Q9UMQ3 279 aaPredicted RBP9.71□□□□□ -0.86
CCDC90B-208ENST00000527025 VWA8A3KMH1 1905 aa9.71□□□□□ -0.86
CCDC90B-208ENST00000527025 CITO14578 2027 aa9.71□□□□□ -0.86
CCDC90B-208ENST00000527025 PLXNA3P51805 1871 aa9.7□□□□□ -0.86
CCDC90B-208ENST00000527025 TRIOO75962 3097 aa9.7□□□□□ -0.86
CCDC90B-208ENST00000527025 A0A0B4J269 797 aa9.7□□□□□ -0.86
CCDC90B-208ENST00000527025 FAM237AA0A1B0GTK4 181 aa9.7□□□□□ -0.86
CCDC90B-208ENST00000527025 A0A1B0GVL5 298 aa9.7□□□□□ -0.86
CCDC90B-208ENST00000527025 GRXCR2A6NFK2 248 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms