RNA–Protein interactions for RNA: ENST00000525964.6

NCAPD3-203, Transcript of non-SMC condensin II complex subunit D3, humanhuman

TSL 1 (best)

Gene NCAPD3, Length 5,025 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-203ENST00000525964 PDGFRAP16234 1089 aa15.31■□□□□ 0.04
NCAPD3-203ENST00000525964 CAPRIN1Q14444 709 aaKnown RBP15.31■□□□□ 0.04
NCAPD3-203ENST00000525964 EDRF1Q3B7T1 1238 aa15.31■□□□□ 0.04
NCAPD3-203ENST00000525964 TRMT10CQ7L0Y3 403 aaKnown RBP15.31■□□□□ 0.04
NCAPD3-203ENST00000525964 MXRA8Q9BRK3 442 aa15.31■□□□□ 0.04
NCAPD3-203ENST00000525964 FOXP2O15409 715 aa15.31■□□□□ 0.04
NCAPD3-203ENST00000525964 PBXIP1Q96AQ6 731 aa15.31■□□□□ 0.04
NCAPD3-203ENST00000525964 DCUN1D1Q96GG9 259 aa15.31■□□□□ 0.04
NCAPD3-203ENST00000525964 MOV10L1Q9BXT6 1211 aaKnown RBP15.31■□□□□ 0.04
NCAPD3-203ENST00000525964 DFFAO00273 331 aa15.3■□□□□ 0.04
NCAPD3-203ENST00000525964 MRPS25P82663 173 aaKnown RBP15.3■□□□□ 0.04
NCAPD3-203ENST00000525964 PRKCEQ02156 737 aa15.3■□□□□ 0.04
NCAPD3-203ENST00000525964 LCA5Q86VQ0 697 aa15.3■□□□□ 0.04
NCAPD3-203ENST00000525964 ZBED8Q8IZ13 594 aa15.3■□□□□ 0.04
NCAPD3-203ENST00000525964 GLT1D1Q96MS3 346 aa15.3■□□□□ 0.04
NCAPD3-203ENST00000525964 REEP2Q9BRK0 252 aa15.3■□□□□ 0.04
NCAPD3-203ENST00000525964 TEX12Q9BXU0 123 aa15.3■□□□□ 0.04
NCAPD3-203ENST00000525964 C3orf70A6NLC5 250 aaPredicted RBP15.3■□□□□ 0.04
NCAPD3-203ENST00000525964 SNRPFP62306 86 aaKnown RBP15.3■□□□□ 0.04
NCAPD3-203ENST00000525964 CACNB2Q08289 660 aaPredicted RBP15.3■□□□□ 0.04
NCAPD3-203ENST00000525964 LAMC2Q13753 1193 aa15.3■□□□□ 0.04
NCAPD3-203ENST00000525964 SNRNP35Q16560 246 aaKnown RBP15.3■□□□□ 0.04
NCAPD3-203ENST00000525964 GNASQ5JWF2 1037 aa15.3■□□□□ 0.04
NCAPD3-203ENST00000525964 IZUMO3Q5VZ72 239 aa15.3■□□□□ 0.04
NCAPD3-203ENST00000525964 NFRKBQ6P4R8 1299 aa15.3■□□□□ 0.04
NCAPD3-203ENST00000525964 TBC1D1Q86TI0 1168 aaPredicted RBP15.3■□□□□ 0.04
NCAPD3-203ENST00000525964 TMEM60Q9H2L4 133 aa15.3■□□□□ 0.04
NCAPD3-203ENST00000525964 SUDS3Q9H7L9 328 aaPredicted RBP15.3■□□□□ 0.04
NCAPD3-203ENST00000525964 ARHGEF40Q8TER5 1519 aa15.3■□□□□ 0.04
NCAPD3-203ENST00000525964 E2F6O75461 281 aa15.3■□□□□ 0.04
NCAPD3-203ENST00000525964 TRPA1O75762 1119 aa15.3■□□□□ 0.04
NCAPD3-203ENST00000525964 ATP5HO75947 161 aa15.3■□□□□ 0.04
NCAPD3-203ENST00000525964 DPEP1P16444 411 aa15.3■□□□□ 0.04
NCAPD3-203ENST00000525964 HADHAP40939 763 aa15.3■□□□□ 0.04
NCAPD3-203ENST00000525964 TBCCQ15814 346 aa15.3■□□□□ 0.04
NCAPD3-203ENST00000525964 ZC3H18Q86VM9 953 aaKnown RBP15.3■□□□□ 0.04
NCAPD3-203ENST00000525964 RDM1Q8NG50 284 aa15.3■□□□□ 0.04
NCAPD3-203ENST00000525964 LAMC1P11047 1609 aa15.3■□□□□ 0.04
NCAPD3-203ENST00000525964 RNF17Q9BXT8 1623 aaKnown RBP15.3■□□□□ 0.04
NCAPD3-203ENST00000525964 PTPRUQ92729 1446 aa15.3■□□□□ 0.04
NCAPD3-203ENST00000525964 CHD1O14646 1710 aa15.3■□□□□ 0.04
NCAPD3-203ENST00000525964 POLRMTO00411 1230 aaKnown RBP15.29■□□□□ 0.04
NCAPD3-203ENST00000525964 PSMD3O43242 534 aa15.29■□□□□ 0.04
NCAPD3-203ENST00000525964 GCKP35557 465 aa15.29■□□□□ 0.04
NCAPD3-203ENST00000525964 EIF3EP60228 445 aaKnown RBP15.29■□□□□ 0.04
NCAPD3-203ENST00000525964 DGKDQ16760 1214 aa15.29■□□□□ 0.04
NCAPD3-203ENST00000525964 ANO4Q32M45 955 aa15.29■□□□□ 0.04
NCAPD3-203ENST00000525964 CLEC10AQ8IUN9 316 aa15.29■□□□□ 0.04
NCAPD3-203ENST00000525964 AIPL1Q9NZN9 384 aa15.29■□□□□ 0.04
NCAPD3-203ENST00000525964 ZFATQ9P243 1243 aa15.29■□□□□ 0.04
NCAPD3-203ENST00000525964 BRAFP15056 766 aa15.29■□□□□ 0.04
NCAPD3-203ENST00000525964 TEDDM1Q5T9Z0 273 aa15.29■□□□□ 0.04
NCAPD3-203ENST00000525964 FAM47EQ6ZV65 393 aa15.29■□□□□ 0.04
NCAPD3-203ENST00000525964 ATL2Q8NHH9 583 aa15.29■□□□□ 0.04
NCAPD3-203ENST00000525964 SH2D3AQ9BRG2 576 aa15.29■□□□□ 0.04
NCAPD3-203ENST00000525964 TAF1DQ9H5J8 278 aaPredicted RBP15.29■□□□□ 0.04
NCAPD3-203ENST00000525964 GPBP1L1Q9HC44 474 aaPredicted RBP15.29■□□□□ 0.04
NCAPD3-203ENST00000525964 ANKEF1Q9NU02 776 aa15.29■□□□□ 0.04
NCAPD3-203ENST00000525964 PCDHGB4Q9UN71 923 aa15.29■□□□□ 0.04
NCAPD3-203ENST00000525964 RHOBTB3O94955 611 aa15.29■□□□□ 0.04
NCAPD3-203ENST00000525964 FMO5P49326 533 aa15.29■□□□□ 0.04
NCAPD3-203ENST00000525964 SULT1E1P49888 294 aa15.29■□□□□ 0.04
NCAPD3-203ENST00000525964 SLC15A2Q16348 729 aa15.29■□□□□ 0.04
NCAPD3-203ENST00000525964 GRAMD1BQ3KR37 738 aa15.29■□□□□ 0.04
NCAPD3-203ENST00000525964 MTHFD1LQ6UB35 978 aa15.29■□□□□ 0.04
NCAPD3-203ENST00000525964 ADSSL1Q8N142 457 aa15.29■□□□□ 0.04
NCAPD3-203ENST00000525964 STKLD1Q8NE28 680 aa15.29■□□□□ 0.04
NCAPD3-203ENST00000525964 ZNF512Q96ME7 567 aaPredicted RBP15.29■□□□□ 0.04
NCAPD3-203ENST00000525964 LIMA1Q9UHB6 759 aaKnown RBP15.29■□□□□ 0.04
NCAPD3-203ENST00000525964 CLTCL1P53675 1640 aa15.29■□□□□ 0.04
NCAPD3-203ENST00000525964 GYG2O15488 501 aa15.29■□□□□ 0.04
NCAPD3-203ENST00000525964 LAMB3Q13751 1172 aa15.29■□□□□ 0.04
NCAPD3-203ENST00000525964 RCOR2Q8IZ40 523 aa15.29■□□□□ 0.04
NCAPD3-203ENST00000525964 SPATA31A5Q5VU36 1347 aa15.29■□□□□ 0.04
NCAPD3-203ENST00000525964 SPATA31A7Q8IWB4 1347 aa15.29■□□□□ 0.04
NCAPD3-203ENST00000525964 PRRG1O14668 218 aa15.28■□□□□ 0.04
NCAPD3-203ENST00000525964 SV2CQ496J9 727 aa15.28■□□□□ 0.04
NCAPD3-203ENST00000525964 ZBTB41Q5SVQ8 909 aa15.28■□□□□ 0.04
NCAPD3-203ENST00000525964 CXorf38Q8TB03 319 aa15.28■□□□□ 0.04
NCAPD3-203ENST00000525964 TMEM39BQ9GZU3 492 aa15.28■□□□□ 0.04
NCAPD3-203ENST00000525964 RRP15Q9Y3B9 282 aaKnown RBP15.28■□□□□ 0.04
NCAPD3-203ENST00000525964 FOXN1O15353 648 aa15.28■□□□□ 0.04
NCAPD3-203ENST00000525964 ACADSBP45954 432 aa15.28■□□□□ 0.04
NCAPD3-203ENST00000525964 CPT1AP50416 773 aa15.28■□□□□ 0.04
NCAPD3-203ENST00000525964 ITPK1Q13572 414 aa15.28■□□□□ 0.04
NCAPD3-203ENST00000525964 ATF7IP2Q5U623 682 aa15.28■□□□□ 0.04
NCAPD3-203ENST00000525964 NUDCD3Q8IVD9 361 aa15.28■□□□□ 0.04
NCAPD3-203ENST00000525964 SLC26A7Q8TE54 656 aa15.28■□□□□ 0.04
NCAPD3-203ENST00000525964 RNPC3Q96LT9 517 aaKnown RBP15.28■□□□□ 0.04
NCAPD3-203ENST00000525964 NT5C1AQ9BXI3 368 aa15.28■□□□□ 0.04
NCAPD3-203ENST00000525964 ASPSCR1Q9BZE9 553 aa15.28■□□□□ 0.04
NCAPD3-203ENST00000525964 SSU72P8A0A1W2PR75 194 aa15.28■□□□□ 0.04
NCAPD3-203ENST00000525964 GAS2O43903 313 aaKnown RBP15.28■□□□□ 0.04
NCAPD3-203ENST00000525964 RPA1P27694 616 aa15.28■□□□□ 0.04
NCAPD3-203ENST00000525964 FASTKD1Q53R41 847 aaKnown RBP15.28■□□□□ 0.04
NCAPD3-203ENST00000525964 RASSF3Q86WH2 238 aa15.28■□□□□ 0.04
NCAPD3-203ENST00000525964 RBBP8NLQ8NC74 664 aaPredicted RBP15.28■□□□□ 0.04
NCAPD3-203ENST00000525964 TRPC7Q9HCX4 862 aa15.28■□□□□ 0.04
NCAPD3-203ENST00000525964 ATP9BO43861 1147 aa15.28■□□□□ 0.04
NCAPD3-203ENST00000525964 ARSEP51690 589 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms