RNA–Protein interactions for RNA: ENST00000525950.5

BDNF-213, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-213ENST00000525950 PNMA3Q9UL41 463 aa8.54□□□□□ -1.04
BDNF-213ENST00000525950 NAALADL1Q9UQQ1 740 aa8.54□□□□□ -1.04
BDNF-213ENST00000525950 PTPN22Q9Y2R2 807 aa8.54□□□□□ -1.04
BDNF-213ENST00000525950 USH1CQ9Y6N9 552 aa8.54□□□□□ -1.04
BDNF-213ENST00000525950 SIPA1L1O43166 1804 aa8.53□□□□□ -1.04
BDNF-213ENST00000525950 KLRG2A4D1S0 409 aaPredicted RBP8.53□□□□□ -1.04
BDNF-213ENST00000525950 SGPL1O95470 568 aa8.53□□□□□ -1.04
BDNF-213ENST00000525950 ACSL3O95573 720 aa8.53□□□□□ -1.04
BDNF-213ENST00000525950 ASMTLO95671 621 aa8.53□□□□□ -1.04
BDNF-213ENST00000525950 CREB1P16220 341 aa8.53□□□□□ -1.04
BDNF-213ENST00000525950 CALB2P22676 271 aa8.53□□□□□ -1.04
BDNF-213ENST00000525950 CHKAP35790 457 aa8.53□□□□□ -1.04
BDNF-213ENST00000525950 MFAP3P55082 362 aa8.53□□□□□ -1.04
BDNF-213ENST00000525950 GTF2IP78347 998 aa8.53□□□□□ -1.04
BDNF-213ENST00000525950 CAPRIN2Q6IMN6 1127 aaKnown RBP8.53□□□□□ -1.04
BDNF-213ENST00000525950 TMEM179Q6ZVK1 233 aa8.53□□□□□ -1.04
BDNF-213ENST00000525950 CCDC25Q86WR0 208 aa8.53□□□□□ -1.04
BDNF-213ENST00000525950 DENND1AQ8TEH3 1009 aa8.53□□□□□ -1.04
BDNF-213ENST00000525950 ACCSQ96QU6 501 aa8.53□□□□□ -1.04
BDNF-213ENST00000525950 WDR18Q9BV38 432 aa8.53□□□□□ -1.04
BDNF-213ENST00000525950 PITPNM3Q9BZ71 974 aa8.53□□□□□ -1.04
BDNF-213ENST00000525950 IKZF4Q9H2S9 585 aa8.53□□□□□ -1.04
BDNF-213ENST00000525950 FAM47DPA6NHR8 397 aa8.53□□□□□ -1.04
BDNF-213ENST00000525950 TMEM110-MUSTN1A8MSY1 372 aa8.53□□□□□ -1.04
BDNF-213ENST00000525950 F5H6K3 240 aa8.53□□□□□ -1.04
BDNF-213ENST00000525950 THAP12O43422 761 aa8.53□□□□□ -1.04
BDNF-213ENST00000525950 HIP1RO75146 1068 aa8.53□□□□□ -1.04
BDNF-213ENST00000525950 DCTN3O75935 186 aa8.53□□□□□ -1.04
BDNF-213ENST00000525950 MYBL1P10243 752 aa8.53□□□□□ -1.04
BDNF-213ENST00000525950 GCKP35557 465 aa8.53□□□□□ -1.04
BDNF-213ENST00000525950 RASSF2P50749 326 aa8.53□□□□□ -1.04
BDNF-213ENST00000525950 ITGA8P53708 1063 aa8.53□□□□□ -1.04
BDNF-213ENST00000525950 MOGSQ13724 837 aa8.53□□□□□ -1.04
BDNF-213ENST00000525950 SETDB1Q15047 1291 aa8.53□□□□□ -1.04
BDNF-213ENST00000525950 CCNG2Q16589 344 aa8.53□□□□□ -1.04
BDNF-213ENST00000525950 KCTD19Q17RG1 926 aaPredicted RBP8.53□□□□□ -1.04
BDNF-213ENST00000525950 TRAPPC3LQ5T215 181 aa8.53□□□□□ -1.04
BDNF-213ENST00000525950 APOBEC3HQ6NTF7 200 aaKnown RBP8.53□□□□□ -1.04
BDNF-213ENST00000525950 SMIM5Q71RC9 77 aa8.53□□□□□ -1.04
BDNF-213ENST00000525950 SYCP3Q8IZU3 236 aa8.53□□□□□ -1.04
BDNF-213ENST00000525950 CCDC89Q8N998 374 aa8.53□□□□□ -1.04
BDNF-213ENST00000525950 SLC17A8Q8NDX2 589 aa8.53□□□□□ -1.04
BDNF-213ENST00000525950 ZNF398Q8TD17 642 aa8.53□□□□□ -1.04
BDNF-213ENST00000525950 TIPINQ9BVW5 301 aa8.53□□□□□ -1.04
BDNF-213ENST00000525950 TLE6Q9H808 572 aa8.53□□□□□ -1.04
BDNF-213ENST00000525950 ASIC3Q9UHC3 531 aa8.53□□□□□ -1.04
BDNF-213ENST00000525950 ANAPC5Q9UJX4 755 aa8.53□□□□□ -1.04
BDNF-213ENST00000525950 LMNAP02545 664 aaKnown RBP8.53□□□□□ -1.04
BDNF-213ENST00000525950 ATF2P15336 505 aa8.53□□□□□ -1.04
BDNF-213ENST00000525950 CCDC142Q17RM4 750 aa8.53□□□□□ -1.04
BDNF-213ENST00000525950 CERKLQ49MI3 558 aaPredicted RBP8.53□□□□□ -1.04
BDNF-213ENST00000525950 ZC3H12AQ5D1E8 599 aaKnown RBP8.53□□□□□ -1.04
BDNF-213ENST00000525950 ANKS1BQ7Z6G8 1248 aa8.53□□□□□ -1.04
BDNF-213ENST00000525950 SP8Q8IXZ3 490 aa8.53□□□□□ -1.04
BDNF-213ENST00000525950 DAW1Q8N136 415 aa8.53□□□□□ -1.04
BDNF-213ENST00000525950 XXYLT1Q8NBI6 393 aa8.53□□□□□ -1.04
BDNF-213ENST00000525950 CYP2W1Q8TAV3 490 aa8.53□□□□□ -1.04
BDNF-213ENST00000525950 MGARPQ8TDB4 240 aa8.53□□□□□ -1.04
BDNF-213ENST00000525950 PRCCQ92733 491 aaPredicted RBP8.53□□□□□ -1.04
BDNF-213ENST00000525950 KIFAP3Q92845 792 aa8.53□□□□□ -1.04
BDNF-213ENST00000525950 UTP4Q969X6 686 aaKnown RBP8.53□□□□□ -1.04
BDNF-213ENST00000525950 ZNF653Q96CK0 615 aa8.53□□□□□ -1.04
BDNF-213ENST00000525950 TRIM11Q96F44 468 aa8.53□□□□□ -1.04
BDNF-213ENST00000525950 NAF1Q96HR8 494 aaKnown RBP8.53□□□□□ -1.04
BDNF-213ENST00000525950 IWS1Q96ST2 819 aa8.53□□□□□ -1.04
BDNF-213ENST00000525950 EHMT1Q9H9B1 1298 aa8.53□□□□□ -1.04
BDNF-213ENST00000525950 LARSQ9P2J5 1176 aaKnown RBP8.53□□□□□ -1.04
BDNF-213ENST00000525950 PI4KBQ9UBF8 816 aa8.53□□□□□ -1.04
BDNF-213ENST00000525950 SMG5Q9UPR3 1016 aaKnown RBP8.53□□□□□ -1.04
BDNF-213ENST00000525950 LY75O60449 1722 aa8.52□□□□□ -1.04
BDNF-213ENST00000525950 C6orf229H3BNL8 230 aa8.52□□□□□ -1.04
BDNF-213ENST00000525950 NDC80O14777 642 aa8.52□□□□□ -1.04
BDNF-213ENST00000525950 CLDN3O15551 220 aa8.52□□□□□ -1.04
BDNF-213ENST00000525950 IBSPP21815 317 aaPredicted RBP8.52□□□□□ -1.04
BDNF-213ENST00000525950 GPC3P51654 580 aa8.52□□□□□ -1.04
BDNF-213ENST00000525950 KYNUQ16719 465 aa8.52□□□□□ -1.04
BDNF-213ENST00000525950 SPICE1Q8N0Z3 855 aa8.52□□□□□ -1.04
BDNF-213ENST00000525950 CERS5Q8N5B7 392 aa8.52□□□□□ -1.04
BDNF-213ENST00000525950 ANKRD42Q8N9B4 389 aa8.52□□□□□ -1.04
BDNF-213ENST00000525950 DDX1Q92499 740 aaKnown RBP8.52□□□□□ -1.04
BDNF-213ENST00000525950 SPDL1Q96EA4 605 aa8.52□□□□□ -1.04
BDNF-213ENST00000525950 SAAL1Q96ER3 474 aa8.52□□□□□ -1.04
BDNF-213ENST00000525950 KREMEN1Q96MU8 473 aa8.52□□□□□ -1.04
BDNF-213ENST00000525950 TTC25Q96NG3 672 aa8.52□□□□□ -1.04
BDNF-213ENST00000525950 IDI2Q9BXS1 227 aa8.52□□□□□ -1.04
BDNF-213ENST00000525950 ETNK1Q9HBU6 452 aa8.52□□□□□ -1.04
BDNF-213ENST00000525950 SSU72Q9NP77 194 aaKnown RBP8.52□□□□□ -1.04
BDNF-213ENST00000525950 CYP39A1Q9NYL5 469 aa8.52□□□□□ -1.04
BDNF-213ENST00000525950 BTAF1O14981 1849 aa8.52□□□□□ -1.04
BDNF-213ENST00000525950 MYH11P35749 1972 aa8.52□□□□□ -1.05
BDNF-213ENST00000525950 GRIN3BO60391 1043 aa8.52□□□□□ -1.05
BDNF-213ENST00000525950 CYP11B1P15538 503 aa8.52□□□□□ -1.05
BDNF-213ENST00000525950 FOXN2P32314 431 aa8.52□□□□□ -1.05
BDNF-213ENST00000525950 GTF2H1P32780 548 aa8.52□□□□□ -1.05
BDNF-213ENST00000525950 MXI1P50539 228 aa8.52□□□□□ -1.05
BDNF-213ENST00000525950 DLG4P78352 724 aa8.52□□□□□ -1.05
BDNF-213ENST00000525950 GTF2BQ00403 316 aa8.52□□□□□ -1.05
BDNF-213ENST00000525950 KLF1Q13351 362 aaPredicted RBP8.52□□□□□ -1.05
BDNF-213ENST00000525950 TMEM63BQ5T3F8 832 aa8.52□□□□□ -1.05
BDNF-213ENST00000525950 OTUD6AQ7L8S5 288 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms