RNA–Protein interactions for RNA: ENST00000525745.5

ECHDC1-218, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-218ENST00000525745 ADAM2Q99965 735 aa3.57□□□□□ -1.84
ECHDC1-218ENST00000525745 PCGF6Q9BYE7 350 aa3.57□□□□□ -1.84
ECHDC1-218ENST00000525745 RNF181Q9P0P0 153 aa3.57□□□□□ -1.84
ECHDC1-218ENST00000525745 MCM8Q9UJA3 840 aa3.57□□□□□ -1.84
ECHDC1-218ENST00000525745 TNFRSF18Q9Y5U5 241 aa3.57□□□□□ -1.84
ECHDC1-218ENST00000525745 FPGT-TNNI3KV9GXZ4 949 aa3.57□□□□□ -1.84
ECHDC1-218ENST00000525745 SPATA31A6Q5VVP1 1343 aa3.56□□□□□ -1.84
ECHDC1-218ENST00000525745 PIPSLA2A3N6 862 aa3.56□□□□□ -1.84
ECHDC1-218ENST00000525745 AKR1B10O60218 316 aa3.56□□□□□ -1.84
ECHDC1-218ENST00000525745 PHF2O75151 1096 aa3.56□□□□□ -1.84
ECHDC1-218ENST00000525745 SPDEFO95238 335 aa3.56□□□□□ -1.84
ECHDC1-218ENST00000525745 ITGAMP11215 1152 aa3.56□□□□□ -1.84
ECHDC1-218ENST00000525745 FBLP22087 321 aaKnown RBP3.56□□□□□ -1.84
ECHDC1-218ENST00000525745 PLA2G5P39877 138 aa3.56□□□□□ -1.84
ECHDC1-218ENST00000525745 CLK3P49761 638 aaKnown RBP3.56□□□□□ -1.84
ECHDC1-218ENST00000525745 SEC24CP53992 1094 aa3.56□□□□□ -1.84
ECHDC1-218ENST00000525745 CLRN1P58418 232 aa3.56□□□□□ -1.84
ECHDC1-218ENST00000525745 FAPQ12884 760 aa3.56□□□□□ -1.84
ECHDC1-218ENST00000525745 FSCN1Q16658 493 aaKnown RBP3.56□□□□□ -1.84
ECHDC1-218ENST00000525745 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.56□□□□□ -1.84
ECHDC1-218ENST00000525745 MST1LQ2TV78 715 aa3.56□□□□□ -1.84
ECHDC1-218ENST00000525745 RNF219Q5W0B1 726 aaPredicted RBP3.56□□□□□ -1.84
ECHDC1-218ENST00000525745 RD3Q7Z3Z2 195 aa3.56□□□□□ -1.84
ECHDC1-218ENST00000525745 DDX42Q86XP3 938 aaKnown RBP eCLIP3.56□□□□□ -1.84
ECHDC1-218ENST00000525745 SLC44A3Q8N4M1 653 aa3.56□□□□□ -1.84
ECHDC1-218ENST00000525745 OR56A1Q8NGH5 318 aa3.56□□□□□ -1.84
ECHDC1-218ENST00000525745 ASB10Q8WXI3 467 aa3.56□□□□□ -1.84
ECHDC1-218ENST00000525745 COQ10AQ96MF6 247 aa3.56□□□□□ -1.84
ECHDC1-218ENST00000525745 UHRF1Q96T88 793 aaPredicted RBP3.56□□□□□ -1.84
ECHDC1-218ENST00000525745 NEU1Q99519 415 aa3.56□□□□□ -1.84
ECHDC1-218ENST00000525745 FAM126AQ9BYI3 521 aaPredicted RBP3.56□□□□□ -1.84
ECHDC1-218ENST00000525745 RSAD1Q9HA92 442 aa3.56□□□□□ -1.84
ECHDC1-218ENST00000525745 SYBUQ9NX95 663 aa3.56□□□□□ -1.84
ECHDC1-218ENST00000525745 DKK2Q9UBU2 259 aa3.56□□□□□ -1.84
ECHDC1-218ENST00000525745 ATP11BQ9Y2G3 1177 aa3.56□□□□□ -1.84
ECHDC1-218ENST00000525745 ATP8A1Q9Y2Q0 1164 aa3.56□□□□□ -1.84
ECHDC1-218ENST00000525745 EPN1Q9Y6I3 576 aaPredicted RBP3.56□□□□□ -1.84
ECHDC1-218ENST00000525745 PCSK5Q92824 1860 aa3.56□□□□□ -1.84
ECHDC1-218ENST00000525745 DRGXA6NNA5 263 aa3.55□□□□□ -1.84
ECHDC1-218ENST00000525745 CXorf49A8MYA2 514 aaPredicted RBP3.55□□□□□ -1.84
ECHDC1-218ENST00000525745 CDKL5O76039 1030 aa3.55□□□□□ -1.84
ECHDC1-218ENST00000525745 HMGB1P09429 215 aaKnown RBP3.55□□□□□ -1.84
ECHDC1-218ENST00000525745 SNRPA1P09661 255 aaKnown RBP3.55□□□□□ -1.84
ECHDC1-218ENST00000525745 TYRP1P17643 537 aa3.55□□□□□ -1.84
ECHDC1-218ENST00000525745 NCLP19338 710 aaKnown RBP3.55□□□□□ -1.84
ECHDC1-218ENST00000525745 ENPP1P22413 925 aa3.55□□□□□ -1.84
ECHDC1-218ENST00000525745 CXCR5P32302 372 aa3.55□□□□□ -1.84
ECHDC1-218ENST00000525745 SESN3P58005 492 aa3.55□□□□□ -1.84
ECHDC1-218ENST00000525745 TMPRSS15P98073 1019 aa3.55□□□□□ -1.84
ECHDC1-218ENST00000525745 FOXI1Q12951 378 aa3.55□□□□□ -1.84
ECHDC1-218ENST00000525745 STAT4Q14765 748 aa3.55□□□□□ -1.84
ECHDC1-218ENST00000525745 PTPROQ16827 1216 aa3.55□□□□□ -1.84
ECHDC1-218ENST00000525745 ERCC6LQ2NKX8 1250 aa3.55□□□□□ -1.84
ECHDC1-218ENST00000525745 FAM47AQ5JRC9 791 aa3.55□□□□□ -1.84
ECHDC1-218ENST00000525745 ABHD17BQ5VST6 288 aa3.55□□□□□ -1.84
ECHDC1-218ENST00000525745 AGAP9Q5VTM2 703 aa3.55□□□□□ -1.84
ECHDC1-218ENST00000525745 TSHZ3Q63HK5 1081 aa3.55□□□□□ -1.84
ECHDC1-218ENST00000525745 METRNLQ641Q3 311 aa3.55□□□□□ -1.84
ECHDC1-218ENST00000525745 SYCE2Q6PIF2 218 aa3.55□□□□□ -1.84
ECHDC1-218ENST00000525745 MED25Q71SY5 747 aa3.55□□□□□ -1.84
ECHDC1-218ENST00000525745 TRMT2AQ8IZ69 625 aaKnown RBP3.55□□□□□ -1.84
ECHDC1-218ENST00000525745 CLRN3Q8NCR9 226 aa3.55□□□□□ -1.84
ECHDC1-218ENST00000525745 NTN5Q8WTR8 489 aaPredicted RBP3.55□□□□□ -1.84
ECHDC1-218ENST00000525745 TGFBRAP1Q8WUH2 860 aa3.55□□□□□ -1.84
ECHDC1-218ENST00000525745 RIN2Q8WYP3 895 aaPredicted RBP3.55□□□□□ -1.84
ECHDC1-218ENST00000525745 LINC00476Q8WZB0 136 aa3.55□□□□□ -1.84
ECHDC1-218ENST00000525745 RAX2Q96IS3 184 aa3.55□□□□□ -1.84
ECHDC1-218ENST00000525745 ACAP3Q96P50 834 aa3.55□□□□□ -1.84
ECHDC1-218ENST00000525745 QRSL1Q9H0R6 528 aaKnown RBP3.55□□□□□ -1.84
ECHDC1-218ENST00000525745 ADARB2Q9NS39 739 aaKnown RBP3.55□□□□□ -1.84
ECHDC1-218ENST00000525745 TESQ9UGI8 421 aaKnown RBP3.55□□□□□ -1.84
ECHDC1-218ENST00000525745 APOBEC2Q9Y235 224 aaKnown RBP3.55□□□□□ -1.84
ECHDC1-218ENST00000525745 COL4A3BPQ9Y5P4 624 aa3.55□□□□□ -1.84
ECHDC1-218ENST00000525745 WRNQ14191 1432 aaPredicted RBP eCLIP3.54□□□□□ -1.84
ECHDC1-218ENST00000525745 PHLDB1Q86UU1 1377 aa3.54□□□□□ -1.84
ECHDC1-218ENST00000525745 MARCH11A6NNE9 402 aa3.54□□□□□ -1.84
ECHDC1-218ENST00000525745 GOLGA8AA7E2F4 631 aa3.54□□□□□ -1.84
ECHDC1-218ENST00000525745 PJA2O43164 708 aa3.54□□□□□ -1.84
ECHDC1-218ENST00000525745 GPR39O43194 453 aa3.54□□□□□ -1.84
ECHDC1-218ENST00000525745 FOSP01100 380 aaPredicted RBP3.54□□□□□ -1.84
ECHDC1-218ENST00000525745 CFIP05156 583 aa3.54□□□□□ -1.84
ECHDC1-218ENST00000525745 RAP2AP10114 183 aa3.54□□□□□ -1.84
ECHDC1-218ENST00000525745 CD38P28907 300 aa3.54□□□□□ -1.84
ECHDC1-218ENST00000525745 ECHS1P30084 290 aa3.54□□□□□ -1.84
ECHDC1-218ENST00000525745 PTH2RP49190 550 aa3.54□□□□□ -1.84
ECHDC1-218ENST00000525745 PER3P56645 1201 aa3.54□□□□□ -1.84
ECHDC1-218ENST00000525745 C21orf58P58505 322 aa3.54□□□□□ -1.84
ECHDC1-218ENST00000525745 BLOC1S1P78537 153 aa3.54□□□□□ -1.84
ECHDC1-218ENST00000525745 AMPD3Q01432 767 aa3.54□□□□□ -1.84
ECHDC1-218ENST00000525745 SPDYE7PQ495Y7 208 aa3.54□□□□□ -1.84
ECHDC1-218ENST00000525745 RRP12Q5JTH9 1297 aaKnown RBP3.54□□□□□ -1.84
ECHDC1-218ENST00000525745 FBXO42Q6P3S6 717 aa3.54□□□□□ -1.84
ECHDC1-218ENST00000525745 LHFPL2Q6ZUX7 228 aa3.54□□□□□ -1.84
ECHDC1-218ENST00000525745 MAPKAPK5Q8IW41 473 aa3.54□□□□□ -1.84
ECHDC1-218ENST00000525745 RHOT2Q8IXI1 618 aa3.54□□□□□ -1.84
ECHDC1-218ENST00000525745 GPR156Q8NFN8 814 aa3.54□□□□□ -1.84
ECHDC1-218ENST00000525745 AUTS2Q8WXX7 1259 aa3.54□□□□□ -1.84
ECHDC1-218ENST00000525745 ZSWIM1Q9BR11 485 aa3.54□□□□□ -1.84
ECHDC1-218ENST00000525745 ALOXE3Q9BYJ1 711 aa3.54□□□□□ -1.84
ECHDC1-218ENST00000525745 REXO4Q9GZR2 422 aaKnown RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms