RNA–Protein interactions for RNA: ENST00000525504.5

CCDC90B-204, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,232 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-204ENST00000525504 SKIP12755 728 aa6.64□□□□□ -1.35
CCDC90B-204ENST00000525504 IL9P15248 144 aa6.64□□□□□ -1.35
CCDC90B-204ENST00000525504 SFPQP23246 707 aaKnown RBP eCLIP6.64□□□□□ -1.35
CCDC90B-204ENST00000525504 YWHABP31946 246 aaKnown RBP6.64□□□□□ -1.35
CCDC90B-204ENST00000525504 PPM1AP35813 382 aa6.64□□□□□ -1.35
CCDC90B-204ENST00000525504 ARL2P36404 184 aa6.64□□□□□ -1.35
CCDC90B-204ENST00000525504 PCBP4P57723 403 aaKnown RBP6.64□□□□□ -1.35
CCDC90B-204ENST00000525504 SMAD4Q13485 552 aaKnown RBP6.64□□□□□ -1.35
CCDC90B-204ENST00000525504 DUSP6Q16828 381 aa6.64□□□□□ -1.35
CCDC90B-204ENST00000525504 TMEM214Q6NUQ4 689 aaKnown RBP6.64□□□□□ -1.35
CCDC90B-204ENST00000525504 KCNT2Q6UVM3 1135 aa6.64□□□□□ -1.35
CCDC90B-204ENST00000525504 OTUD6AQ7L8S5 288 aa6.64□□□□□ -1.35
CCDC90B-204ENST00000525504 SRGAP1Q7Z6B7 1085 aa6.64□□□□□ -1.35
CCDC90B-204ENST00000525504 ADGRD2Q7Z7M1 963 aa6.64□□□□□ -1.35
CCDC90B-204ENST00000525504 KSR1Q8IVT5 923 aa6.64□□□□□ -1.35
CCDC90B-204ENST00000525504 DIS3L2Q8IYB7 885 aaKnown RBP6.64□□□□□ -1.35
CCDC90B-204ENST00000525504 SLC39A11Q8N1S5 342 aa6.64□□□□□ -1.35
CCDC90B-204ENST00000525504 MRPL43Q8N983 215 aaKnown RBP6.64□□□□□ -1.35
CCDC90B-204ENST00000525504 COLGALT1Q8NBJ5 622 aa6.64□□□□□ -1.35
CCDC90B-204ENST00000525504 FBXO18Q8NFZ0 1043 aa6.64□□□□□ -1.35
CCDC90B-204ENST00000525504 SLC7A3Q8WY07 619 aa6.64□□□□□ -1.35
CCDC90B-204ENST00000525504 SUSD6Q92537 303 aa6.64□□□□□ -1.35
CCDC90B-204ENST00000525504 MRPS27Q92552 414 aaKnown RBP6.64□□□□□ -1.35
CCDC90B-204ENST00000525504 ZNF668Q96K58 619 aaPredicted RBP6.64□□□□□ -1.35
CCDC90B-204ENST00000525504 CEP170P1Q96L14 293 aa6.64□□□□□ -1.35
CCDC90B-204ENST00000525504 MDFIQ99750 246 aa6.64□□□□□ -1.35
CCDC90B-204ENST00000525504 SH2D3AQ9BRG2 576 aa6.64□□□□□ -1.35
CCDC90B-204ENST00000525504 TLE6Q9H808 572 aa6.64□□□□□ -1.35
CCDC90B-204ENST00000525504 XPNPEP1Q9NQW7 623 aa6.64□□□□□ -1.35
CCDC90B-204ENST00000525504 ANKEF1Q9NU02 776 aa6.64□□□□□ -1.35
CCDC90B-204ENST00000525504 PUF60Q9UHX1 559 aaKnown RBP6.64□□□□□ -1.35
CCDC90B-204ENST00000525504 CD207Q9UJ71 328 aa6.64□□□□□ -1.35
CCDC90B-204ENST00000525504 PCDHA12Q9UN75 941 aa6.64□□□□□ -1.35
CCDC90B-204ENST00000525504 TTC3P53804 2025 aa6.64□□□□□ -1.35
CCDC90B-204ENST00000525504 INPPL1O15357 1258 aa6.63□□□□□ -1.35
CCDC90B-204ENST00000525504 LINC01565O15544 149 aa6.63□□□□□ -1.35
CCDC90B-204ENST00000525504 TBX10O75333 385 aa6.63□□□□□ -1.35
CCDC90B-204ENST00000525504 GLP2RO95838 553 aa6.63□□□□□ -1.35
CCDC90B-204ENST00000525504 ALADP13716 330 aa6.63□□□□□ -1.35
CCDC90B-204ENST00000525504 CD33P20138 364 aa6.63□□□□□ -1.35
CCDC90B-204ENST00000525504 FGFR4P22455 802 aa6.63□□□□□ -1.35
CCDC90B-204ENST00000525504 PTENP60484 403 aa6.63□□□□□ -1.35
CCDC90B-204ENST00000525504 NRG1Q02297 640 aaPredicted RBP6.63□□□□□ -1.35
CCDC90B-204ENST00000525504 KRT17Q04695 432 aa6.63□□□□□ -1.35
CCDC90B-204ENST00000525504 LAMTOR4Q0VGL1 99 aa6.63□□□□□ -1.35
CCDC90B-204ENST00000525504 ORC2Q13416 577 aaPredicted RBP6.63□□□□□ -1.35
CCDC90B-204ENST00000525504 CTTNQ14247 550 aaKnown RBP6.63□□□□□ -1.35
CCDC90B-204ENST00000525504 MXD4Q14582 209 aaPredicted RBP6.63□□□□□ -1.35
CCDC90B-204ENST00000525504 TRIP12Q14669 1992 aaPredicted RBP6.63□□□□□ -1.35
CCDC90B-204ENST00000525504 CBX2Q14781 532 aaPredicted RBP6.63□□□□□ -1.35
CCDC90B-204ENST00000525504 UBXN11Q5T124 520 aa6.63□□□□□ -1.35
CCDC90B-204ENST00000525504 PLA2G4FQ68DD2 849 aa6.63□□□□□ -1.35
CCDC90B-204ENST00000525504 FERMT3Q86UX7 667 aa6.63□□□□□ -1.35
CCDC90B-204ENST00000525504 RHPN2Q8IUC4 686 aa6.63□□□□□ -1.35
CCDC90B-204ENST00000525504 LRRC43Q8N309 656 aa6.63□□□□□ -1.35
CCDC90B-204ENST00000525504 C4orf32Q8N8J7 132 aa6.63□□□□□ -1.35
CCDC90B-204ENST00000525504 SMRP1Q8NCR6 262 aa6.63□□□□□ -1.35
CCDC90B-204ENST00000525504 VN1R2Q8NFZ6 395 aa6.63□□□□□ -1.35
CCDC90B-204ENST00000525504 TCP11Q8WWU5 503 aa6.63□□□□□ -1.35
CCDC90B-204ENST00000525504 PSPC1Q8WXF1 523 aaKnown RBP6.63□□□□□ -1.35
CCDC90B-204ENST00000525504 TMEM143Q96AN5 459 aa6.63□□□□□ -1.35
CCDC90B-204ENST00000525504 DYDC2Q96IM9 177 aa6.63□□□□□ -1.35
CCDC90B-204ENST00000525504 ZSCAN31Q96LW9 406 aaPredicted RBP6.63□□□□□ -1.35
CCDC90B-204ENST00000525504 ZNF558Q96NG5 402 aa6.63□□□□□ -1.35
CCDC90B-204ENST00000525504 EIF2AK1Q9BQI3 630 aaKnown RBP6.63□□□□□ -1.35
CCDC90B-204ENST00000525504 LXNQ9BS40 222 aa6.63□□□□□ -1.35
CCDC90B-204ENST00000525504 LRFN3Q9BTN0 628 aa6.63□□□□□ -1.35
CCDC90B-204ENST00000525504 MRPL9Q9BYD2 267 aaKnown RBP6.63□□□□□ -1.35
CCDC90B-204ENST00000525504 NFKBIZQ9BYH8 718 aa6.63□□□□□ -1.35
CCDC90B-204ENST00000525504 KRTAP17-1Q9BYP8 105 aa6.63□□□□□ -1.35
CCDC90B-204ENST00000525504 TANC1Q9C0D5 1861 aa6.63□□□□□ -1.35
CCDC90B-204ENST00000525504 S1PR5Q9H228 398 aa6.63□□□□□ -1.35
CCDC90B-204ENST00000525504 TMEM60Q9H2L4 133 aa6.63□□□□□ -1.35
CCDC90B-204ENST00000525504 FOXP1Q9H334 677 aaPredicted RBP6.63□□□□□ -1.35
CCDC90B-204ENST00000525504 IGFLR1Q9H665 355 aa6.63□□□□□ -1.35
CCDC90B-204ENST00000525504 TTC12Q9H892 705 aaPredicted RBP6.63□□□□□ -1.35
CCDC90B-204ENST00000525504 MINDY3Q9H8M7 445 aa6.63□□□□□ -1.35
CCDC90B-204ENST00000525504 GDPD2Q9HCC8 539 aa6.63□□□□□ -1.35
CCDC90B-204ENST00000525504 BRMS1Q9HCU9 246 aa6.63□□□□□ -1.35
CCDC90B-204ENST00000525504 TLR9Q9NR96 1032 aa6.63□□□□□ -1.35
CCDC90B-204ENST00000525504 AGPAT5Q9NUQ2 364 aa6.63□□□□□ -1.35
CCDC90B-204ENST00000525504 FAM105AQ9NUU6 356 aa6.63□□□□□ -1.35
CCDC90B-204ENST00000525504 PCMTD2Q9NV79 361 aa6.63□□□□□ -1.35
CCDC90B-204ENST00000525504 SPG21Q9NZD8 308 aa6.63□□□□□ -1.35
CCDC90B-204ENST00000525504 PCDHB9Q9Y5E1 797 aa6.63□□□□□ -1.35
CCDC90B-204ENST00000525504 PCDHB2Q9Y5E7 798 aa6.63□□□□□ -1.35
CCDC90B-204ENST00000525504 PCDHGC5Q9Y5F6 944 aa6.63□□□□□ -1.35
CCDC90B-204ENST00000525504 COL4A3BPQ9Y5P4 624 aa6.63□□□□□ -1.35
CCDC90B-204ENST00000525504 IRAK3Q9Y616 596 aa6.63□□□□□ -1.35
CCDC90B-204ENST00000525504 C2orf71A6NGG8 1288 aa6.62□□□□□ -1.35
CCDC90B-204ENST00000525504 MEIS3P2A8K0S8 358 aa6.62□□□□□ -1.35
CCDC90B-204ENST00000525504 LOC730098B7Z3J9 87 aa6.62□□□□□ -1.35
CCDC90B-204ENST00000525504 PER2O15055 1255 aa6.62□□□□□ -1.35
CCDC90B-204ENST00000525504 ATXN7O15265 892 aaPredicted RBP6.62□□□□□ -1.35
CCDC90B-204ENST00000525504 MARCH6O60337 910 aa6.62□□□□□ -1.35
CCDC90B-204ENST00000525504 EFEMP2O95967 443 aa6.62□□□□□ -1.35
CCDC90B-204ENST00000525504 GALTP07902 379 aa6.62□□□□□ -1.35
CCDC90B-204ENST00000525504 SRGAP2CP0DJJ0 459 aa6.62□□□□□ -1.35
CCDC90B-204ENST00000525504 MAPTP10636 758 aaKnown RBP6.62□□□□□ -1.35
CCDC90B-204ENST00000525504 HOXB8P17481 243 aaPredicted RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms