RNA–Protein interactions for RNA: ENST00000525359.1

CLNS1A-203, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-203ENST00000525359 ULK2Q8IYT8 1036 aa3.64□□□□□ -1.83
CLNS1A-203ENST00000525359 LILRA3Q8N6C8 439 aaPredicted RBP3.64□□□□□ -1.83
CLNS1A-203ENST00000525359 PPM1NQ8N819 430 aa3.64□□□□□ -1.83
CLNS1A-203ENST00000525359 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.64□□□□□ -1.83
CLNS1A-203ENST00000525359 HDAC10Q969S8 669 aa3.64□□□□□ -1.83
CLNS1A-203ENST00000525359 MTMR8Q96EF0 704 aa3.64□□□□□ -1.83
CLNS1A-203ENST00000525359 MYEOVQ96EZ4 313 aa3.64□□□□□ -1.83
CLNS1A-203ENST00000525359 CEP95Q96GE4 821 aa3.64□□□□□ -1.83
CLNS1A-203ENST00000525359 MRI1Q9BV20 369 aa3.64□□□□□ -1.83
CLNS1A-203ENST00000525359 KRTAP4-5Q9BYR2 181 aa3.64□□□□□ -1.83
CLNS1A-203ENST00000525359 SLITRK6Q9H5Y7 841 aa3.64□□□□□ -1.83
CLNS1A-203ENST00000525359 DMRT3Q9NQL9 472 aa3.64□□□□□ -1.83
CLNS1A-203ENST00000525359 ZNF277Q9NRM2 450 aaPredicted RBP3.64□□□□□ -1.83
CLNS1A-203ENST00000525359 GPRC5BQ9NZH0 403 aa3.64□□□□□ -1.83
CLNS1A-203ENST00000525359 SCOCQ9UIL1 159 aa3.64□□□□□ -1.83
CLNS1A-203ENST00000525359 ING1Q9UK53 422 aaPredicted RBP3.64□□□□□ -1.83
CLNS1A-203ENST00000525359 AJAP1Q9UKB5 411 aaPredicted RBP3.64□□□□□ -1.83
CLNS1A-203ENST00000525359 FPGT-TNNI3KV9GXZ4 949 aa3.64□□□□□ -1.83
CLNS1A-203ENST00000525359 DRGXA6NNA5 263 aa3.63□□□□□ -1.83
CLNS1A-203ENST00000525359 LEFTY2O00292 366 aa3.63□□□□□ -1.83
CLNS1A-203ENST00000525359 B3GALT2O43825 422 aa3.63□□□□□ -1.83
CLNS1A-203ENST00000525359 NDUFA10O95299 355 aa3.63□□□□□ -1.83
CLNS1A-203ENST00000525359 MYBL2P10244 700 aa3.63□□□□□ -1.83
CLNS1A-203ENST00000525359 ZSCAN20P17040 1043 aaPredicted RBP3.63□□□□□ -1.83
CLNS1A-203ENST00000525359 DDX6P26196 483 aaKnown RBP eCLIP3.63□□□□□ -1.83
CLNS1A-203ENST00000525359 BMPR1AP36894 532 aa3.63□□□□□ -1.83
CLNS1A-203ENST00000525359 AVPR1BP47901 424 aa3.63□□□□□ -1.83
CLNS1A-203ENST00000525359 USP14P54578 494 aa3.63□□□□□ -1.83
CLNS1A-203ENST00000525359 BLOC1S1P78537 153 aa3.63□□□□□ -1.83
CLNS1A-203ENST00000525359 GUCY1B3Q02153 619 aa3.63□□□□□ -1.83
CLNS1A-203ENST00000525359 IGFL4Q6B9Z1 124 aa3.63□□□□□ -1.83
CLNS1A-203ENST00000525359 OTUD7BQ6GQQ9 843 aa3.63□□□□□ -1.83
CLNS1A-203ENST00000525359 LAIR1Q6GTX8 287 aa3.63□□□□□ -1.83
CLNS1A-203ENST00000525359 FOXR2Q6PJQ5 311 aa3.63□□□□□ -1.83
CLNS1A-203ENST00000525359 MRGPREQ86SM8 312 aa3.63□□□□□ -1.83
CLNS1A-203ENST00000525359 RHOT1Q8IXI2 618 aa3.63□□□□□ -1.83
CLNS1A-203ENST00000525359 LCORLQ8N3X6 602 aa3.63□□□□□ -1.83
CLNS1A-203ENST00000525359 SUPT20HQ8NEM7 779 aa3.63□□□□□ -1.83
CLNS1A-203ENST00000525359 REPS2Q8NFH8 660 aa3.63□□□□□ -1.83
CLNS1A-203ENST00000525359 NLGN4YQ8NFZ3 816 aaPredicted RBP3.63□□□□□ -1.83
CLNS1A-203ENST00000525359 CCHCR1Q8TD31 782 aa3.63□□□□□ -1.83
CLNS1A-203ENST00000525359 LARP4BQ92615 738 aaKnown RBP3.63□□□□□ -1.83
CLNS1A-203ENST00000525359 CHFRQ96EP1 664 aa3.63□□□□□ -1.83
CLNS1A-203ENST00000525359 FUBP3Q96I24 572 aaKnown RBP eCLIP3.63□□□□□ -1.83
CLNS1A-203ENST00000525359 CEP89Q96ST8 783 aa3.63□□□□□ -1.83
CLNS1A-203ENST00000525359 TTPALQ9BTX7 342 aa3.63□□□□□ -1.83
CLNS1A-203ENST00000525359 RNPEPQ9H4A4 650 aa3.63□□□□□ -1.83
CLNS1A-203ENST00000525359 TDP1Q9NUW8 608 aa3.63□□□□□ -1.83
CLNS1A-203ENST00000525359 RNF181Q9P0P0 153 aa3.63□□□□□ -1.83
CLNS1A-203ENST00000525359 TRHDEQ9UKU6 1024 aa3.63□□□□□ -1.83
CLNS1A-203ENST00000525359 INTUQ9ULD6 942 aa3.63□□□□□ -1.83
CLNS1A-203ENST00000525359 USP15Q9Y4E8 981 aaPredicted RBP3.63□□□□□ -1.83
CLNS1A-203ENST00000525359 SPEF1Q9Y4P9 236 aa3.63□□□□□ -1.83
CLNS1A-203ENST00000525359 NOX1Q9Y5S8 564 aa3.63□□□□□ -1.83
CLNS1A-203ENST00000525359 AHRRA9YTQ3 701 aa3.62□□□□□ -1.83
CLNS1A-203ENST00000525359 SUV39H1O43463 412 aa3.62□□□□□ -1.83
CLNS1A-203ENST00000525359 NDUFS2O75306 463 aa3.62□□□□□ -1.83
CLNS1A-203ENST00000525359 NCR1O76036 304 aa3.62□□□□□ -1.83
CLNS1A-203ENST00000525359 MT-CO1P00395 513 aa3.62□□□□□ -1.83
CLNS1A-203ENST00000525359 POU3F3P20264 500 aaPredicted RBP3.62□□□□□ -1.83
CLNS1A-203ENST00000525359 DDCP20711 480 aa3.62□□□□□ -1.83
CLNS1A-203ENST00000525359 GUCY1A2P33402 732 aa3.62□□□□□ -1.83
CLNS1A-203ENST00000525359 IARSP41252 1262 aaKnown RBP3.62□□□□□ -1.83
CLNS1A-203ENST00000525359 CHN2P52757 468 aa3.62□□□□□ -1.83
CLNS1A-203ENST00000525359 KRT85P78386 507 aa3.62□□□□□ -1.83
CLNS1A-203ENST00000525359 PPP3CAQ08209 521 aa3.62□□□□□ -1.83
CLNS1A-203ENST00000525359 EFCAB2Q5VUJ9 269 aa3.62□□□□□ -1.83
CLNS1A-203ENST00000525359 ZNF529Q6P280 563 aa3.62□□□□□ -1.83
CLNS1A-203ENST00000525359 MED25Q71SY5 747 aa3.62□□□□□ -1.83
CLNS1A-203ENST00000525359 RHOT2Q8IXI1 618 aa3.62□□□□□ -1.83
CLNS1A-203ENST00000525359 AOPEPQ8N6M6 819 aa3.62□□□□□ -1.83
CLNS1A-203ENST00000525359 C1orf162Q8NEQ5 155 aaPredicted RBP3.62□□□□□ -1.83
CLNS1A-203ENST00000525359 FBXO18Q8NFZ0 1043 aa3.62□□□□□ -1.83
CLNS1A-203ENST00000525359 OR56A1Q8NGH5 318 aa3.62□□□□□ -1.83
CLNS1A-203ENST00000525359 SLC35B2Q8TB61 432 aa3.62□□□□□ -1.83
CLNS1A-203ENST00000525359 STON2Q8WXE9 905 aa3.62□□□□□ -1.83
CLNS1A-203ENST00000525359 FAXDC2Q96IV6 333 aa3.62□□□□□ -1.83
CLNS1A-203ENST00000525359 SLC2A13Q96QE2 648 aa3.62□□□□□ -1.83
CLNS1A-203ENST00000525359 FAM126AQ9BYI3 521 aaPredicted RBP3.62□□□□□ -1.83
CLNS1A-203ENST00000525359 LDAHQ9H6V9 325 aa3.62□□□□□ -1.83
CLNS1A-203ENST00000525359 MAN1C1Q9NR34 630 aa3.62□□□□□ -1.83
CLNS1A-203ENST00000525359 FAM30AQ9NZY2 134 aa3.62□□□□□ -1.83
CLNS1A-203ENST00000525359 CHST2Q9Y4C5 530 aa3.62□□□□□ -1.83
CLNS1A-203ENST00000525359 COL4A3BPQ9Y5P4 624 aa3.62□□□□□ -1.83
CLNS1A-203ENST00000525359 TMEM200CA6NKL6 621 aa3.61□□□□□ -1.83
CLNS1A-203ENST00000525359 PPFIA2O75334 1257 aa3.61□□□□□ -1.83
CLNS1A-203ENST00000525359 FOSP01100 380 aaPredicted RBP3.61□□□□□ -1.83
CLNS1A-203ENST00000525359 MTHFD1P11586 935 aaKnown RBP3.61□□□□□ -1.83
CLNS1A-203ENST00000525359 WASP42768 502 aa3.61□□□□□ -1.83
CLNS1A-203ENST00000525359 ALDH1A3P47895 512 aa3.61□□□□□ -1.83
CLNS1A-203ENST00000525359 INHBEP58166 350 aa3.61□□□□□ -1.83
CLNS1A-203ENST00000525359 FSTL1Q12841 308 aa3.61□□□□□ -1.83
CLNS1A-203ENST00000525359 FAM50AQ14320 339 aaKnown RBP3.61□□□□□ -1.83
CLNS1A-203ENST00000525359 UBXN2BQ14CS0 331 aa3.61□□□□□ -1.83
CLNS1A-203ENST00000525359 ABCB5Q2M3G0 1257 aa3.61□□□□□ -1.83
CLNS1A-203ENST00000525359 ERCC6LQ2NKX8 1250 aa3.61□□□□□ -1.83
CLNS1A-203ENST00000525359 PDCD4Q53EL6 469 aaKnown RBP3.61□□□□□ -1.83
CLNS1A-203ENST00000525359 FAM102AQ5T9C2 384 aaPredicted RBP3.61□□□□□ -1.83
CLNS1A-203ENST00000525359 AGAP9Q5VTM2 703 aa3.61□□□□□ -1.83
CLNS1A-203ENST00000525359 TSHZ3Q63HK5 1081 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms