RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 PARM1Q6UWI2 310 aa26.46■■□□□ 1.83
USP47-205ENST00000525257 NOSTRINQ8IVI9 506 aa26.46■■□□□ 1.83
USP47-205ENST00000525257 C2orf40Q9H1Z8 148 aa26.46■■□□□ 1.83
USP47-205ENST00000525257 POLIQ9UNA4 740 aa26.46■■□□□ 1.83
USP47-205ENST00000525257 ZFP37Q9Y6Q3 630 aaPredicted RBP26.46■■□□□ 1.83
USP47-205ENST00000525257 CCL16O15467 120 aa26.45■■□□□ 1.82
USP47-205ENST00000525257 ADAM12O43184 909 aa26.45■■□□□ 1.82
USP47-205ENST00000525257 LMNAP02545 664 aaKnown RBP26.45■■□□□ 1.82
USP47-205ENST00000525257 PRKCBP05771 671 aa26.45■■□□□ 1.82
USP47-205ENST00000525257 HNRNPA1P09651 372 aaKnown RBP eCLIP26.45■■□□□ 1.82
USP47-205ENST00000525257 NAB2Q15742 525 aa26.45■■□□□ 1.82
USP47-205ENST00000525257 FOXQ1Q9C009 403 aa26.45■■□□□ 1.82
USP47-205ENST00000525257 DLGAP2Q9P1A6 1054 aa26.45■■□□□ 1.82
USP47-205ENST00000525257 CDH7Q9ULB5 785 aa26.45■■□□□ 1.82
USP47-205ENST00000525257 FRYLO94915 3013 aa26.45■■□□□ 1.82
USP47-205ENST00000525257 EDN1P05305 212 aa26.44■■□□□ 1.82
USP47-205ENST00000525257 MAPK6Q16659 721 aa26.44■■□□□ 1.82
USP47-205ENST00000525257 NACC1Q96RE7 527 aa26.44■■□□□ 1.82
USP47-205ENST00000525257 ADPGKQ9BRR6 497 aa26.44■■□□□ 1.82
USP47-205ENST00000525257 GDAQ9Y2T3 454 aa26.44■■□□□ 1.82
USP47-205ENST00000525257 DMXL1Q9Y485 3027 aa26.44■■□□□ 1.82
USP47-205ENST00000525257 GPC5P78333 572 aa26.43■■□□□ 1.82
USP47-205ENST00000525257 ELAVL2Q12926 359 aaKnown RBP26.43■■□□□ 1.82
USP47-205ENST00000525257 EEF1DP3Q658K8 133 aa26.43■■□□□ 1.82
USP47-205ENST00000525257 PADI6Q6TGC4 694 aa26.43■■□□□ 1.82
USP47-205ENST00000525257 PJA1Q8NG27 643 aa26.43■■□□□ 1.82
USP47-205ENST00000525257 SLC7A14Q8TBB6 771 aa26.43■■□□□ 1.82
USP47-205ENST00000525257 CCDC113Q9H0I3 377 aa26.43■■□□□ 1.82
USP47-205ENST00000525257 SEMA4AQ9H3S1 761 aa26.43■■□□□ 1.82
USP47-205ENST00000525257 COL4A3Q01955 1670 aa26.43■■□□□ 1.82
USP47-205ENST00000525257 ACKR2O00590 384 aa26.42■■□□□ 1.82
USP47-205ENST00000525257 XYLBO75191 536 aa26.42■■□□□ 1.82
USP47-205ENST00000525257 LRRN2O75325 713 aa26.42■■□□□ 1.82
USP47-205ENST00000525257 PDXDC1Q6P996 788 aa26.42■■□□□ 1.82
USP47-205ENST00000525257 DEPTORQ8TB45 409 aa26.42■■□□□ 1.82
USP47-205ENST00000525257 ITFG1Q8TB96 612 aa26.42■■□□□ 1.82
USP47-205ENST00000525257 FGF13Q92913 245 aa26.42■■□□□ 1.82
USP47-205ENST00000525257 POLR3CQ9BUI4 534 aaPredicted RBP26.42■■□□□ 1.82
USP47-205ENST00000525257 MIA3Q5JRA6 1907 aa26.41■■□□□ 1.82
USP47-205ENST00000525257 ARHGEF35A5YM69 484 aa26.41■■□□□ 1.82
USP47-205ENST00000525257 SP9P0CG40 484 aa26.41■■□□□ 1.82
USP47-205ENST00000525257 GLULP15104 373 aa26.41■■□□□ 1.82
USP47-205ENST00000525257 HOXA9P31269 272 aa26.41■■□□□ 1.82
USP47-205ENST00000525257 OR1D2P34982 312 aa26.41■■□□□ 1.82
USP47-205ENST00000525257 NAMPTP43490 491 aa26.41■■□□□ 1.82
USP47-205ENST00000525257 GUCY1B3Q02153 619 aa26.41■■□□□ 1.82
USP47-205ENST00000525257 SNW1Q13573 536 aaKnown RBP26.41■■□□□ 1.82
USP47-205ENST00000525257 GLRA4Q5JXX5 417 aa26.41■■□□□ 1.82
USP47-205ENST00000525257 AXDND1Q5T1B0 1012 aaPredicted RBP26.41■■□□□ 1.82
USP47-205ENST00000525257 PDZRN4Q6ZMN7 1036 aaPredicted RBP26.41■■□□□ 1.82
USP47-205ENST00000525257 MTSS1LQ765P7 747 aa26.41■■□□□ 1.82
USP47-205ENST00000525257 ERMP1Q7Z2K6 904 aa26.41■■□□□ 1.82
USP47-205ENST00000525257 C1orf210Q8IVY1 113 aa26.41■■□□□ 1.82
USP47-205ENST00000525257 KIFC3Q9BVG8 833 aa26.41■■□□□ 1.82
USP47-205ENST00000525257 CACNA1AO00555 2505 aa26.41■■□□□ 1.82
USP47-205ENST00000525257 CYP11B2P19099 503 aa26.4■■□□□ 1.82
USP47-205ENST00000525257 IGFBP6P24592 240 aaPredicted RBP26.4■■□□□ 1.82
USP47-205ENST00000525257 STARD6P59095 220 aa26.4■■□□□ 1.82
USP47-205ENST00000525257 ERMNQ8TAM6 284 aa26.4■■□□□ 1.82
USP47-205ENST00000525257 SHDQ96IW2 340 aa26.4■■□□□ 1.82
USP47-205ENST00000525257 POLD4Q9HCU8 107 aa26.4■■□□□ 1.82
USP47-205ENST00000525257 HCFC1R1Q9NWW0 138 aa26.4■■□□□ 1.82
USP47-205ENST00000525257 RPA1P27694 616 aa26.39■■□□□ 1.82
USP47-205ENST00000525257 RAB33AQ14088 237 aa26.39■■□□□ 1.82
USP47-205ENST00000525257 DCAF4L1Q3SXM0 396 aa26.39■■□□□ 1.82
USP47-205ENST00000525257 ZC3H14Q6PJT7 736 aaKnown RBP26.39■■□□□ 1.82
USP47-205ENST00000525257 CACNA1IQ9P0X4 2223 aa26.38■■□□□ 1.81
USP47-205ENST00000525257 FANCMQ8IYD8 2048 aa26.38■■□□□ 1.81
USP47-205ENST00000525257 B3GAT3O94766 335 aa26.38■■□□□ 1.81
USP47-205ENST00000525257 OR52Z1P0C646 297 aa26.38■■□□□ 1.81
USP47-205ENST00000525257 FGFR3P22607 806 aa26.38■■□□□ 1.81
USP47-205ENST00000525257 PPP2R5AQ15172 486 aa26.38■■□□□ 1.81
USP47-205ENST00000525257 SAFBQ15424 915 aaKnown RBP eCLIP26.38■■□□□ 1.81
USP47-205ENST00000525257 ZNF174Q15697 407 aa26.38■■□□□ 1.81
USP47-205ENST00000525257 RSPO2Q6UXX9 243 aaPredicted RBP26.38■■□□□ 1.81
USP47-205ENST00000525257 HINFPQ9BQA5 517 aa26.38■■□□□ 1.81
USP47-205ENST00000525257 KXD1Q9BQD3 176 aa26.38■■□□□ 1.81
USP47-205ENST00000525257 MTRRQ9UBK8 725 aa26.38■■□□□ 1.81
USP47-205ENST00000525257 CDY1Q9Y6F8 540 aa26.38■■□□□ 1.81
USP47-205ENST00000525257 TRIP11Q15643 1979 aa26.38■■□□□ 1.81
USP47-205ENST00000525257 NOTCH4Q99466 2003 aa26.38■■□□□ 1.81
USP47-205ENST00000525257 CLCNKBP51801 687 aa26.37■■□□□ 1.81
USP47-205ENST00000525257 NEK4P51957 841 aa26.37■■□□□ 1.81
USP47-205ENST00000525257 ST3GAL1Q11201 340 aa26.37■■□□□ 1.81
USP47-205ENST00000525257 MLF2Q15773 248 aaPredicted RBP26.37■■□□□ 1.81
USP47-205ENST00000525257 PABPC1LQ4VXU2 614 aaKnown RBP26.37■■□□□ 1.81
USP47-205ENST00000525257 KIAA2013Q8IYS2 634 aa26.37■■□□□ 1.81
USP47-205ENST00000525257 ING5Q8WYH8 240 aa26.37■■□□□ 1.81
USP47-205ENST00000525257 IFT74Q96LB3 600 aa26.37■■□□□ 1.81
USP47-205ENST00000525257 PPP1R10Q96QC0 940 aaKnown RBP26.37■■□□□ 1.81
USP47-205ENST00000525257 GOLGA2P5Q9HBQ8 144 aa26.37■■□□□ 1.81
USP47-205ENST00000525257 DNMT3BQ9UBC3 853 aaKnown RBP26.37■■□□□ 1.81
USP47-205ENST00000525257 OTOGLQ3ZCN5 2332 aa26.36■■□□□ 1.81
USP47-205ENST00000525257 KANSL1LA0AUZ9 987 aa26.36■■□□□ 1.81
USP47-205ENST00000525257 TMEM189-UBE2V1I3L0A0 370 aa26.36■■□□□ 1.81
USP47-205ENST00000525257 POU2F2P09086 479 aa26.36■■□□□ 1.81
USP47-205ENST00000525257 TKTP29401 623 aaKnown RBP26.36■■□□□ 1.81
USP47-205ENST00000525257 RBM25P49756 843 aaKnown RBP26.36■■□□□ 1.81
USP47-205ENST00000525257 UVSSAQ2YD98 709 aa26.36■■□□□ 1.81
USP47-205ENST00000525257 NT5DC1Q5TFE4 455 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms