RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 LGALS16A8MUM7 142 aa17.18■□□□□ 0.34
TSPAN4-213ENST00000524895 PFKMP08237 780 aa17.18■□□□□ 0.34
TSPAN4-213ENST00000524895 AKAP5P24588 427 aa17.18■□□□□ 0.34
TSPAN4-213ENST00000524895 DLG4P78352 724 aa17.18■□□□□ 0.34
TSPAN4-213ENST00000524895 MIIPQ5JXC2 388 aa17.18■□□□□ 0.34
TSPAN4-213ENST00000524895 FKBP15Q5T1M5 1219 aa17.18■□□□□ 0.34
TSPAN4-213ENST00000524895 RPUSD2Q8IZ73 545 aaKnown RBP17.18■□□□□ 0.34
TSPAN4-213ENST00000524895 DPF3Q92784 378 aa17.18■□□□□ 0.34
TSPAN4-213ENST00000524895 SNX27Q96L92 541 aa17.18■□□□□ 0.34
TSPAN4-213ENST00000524895 CGRRF1Q99675 332 aa17.18■□□□□ 0.34
TSPAN4-213ENST00000524895 XPO4Q9C0E2 1151 aaKnown RBP17.18■□□□□ 0.34
TSPAN4-213ENST00000524895 NDST4Q9H3R1 872 aa17.18■□□□□ 0.34
TSPAN4-213ENST00000524895 MMRN2Q9H8L6 949 aa17.18■□□□□ 0.34
TSPAN4-213ENST00000524895 RALGAPA2Q2PPJ7 1873 aa17.18■□□□□ 0.34
TSPAN4-213ENST00000524895 LACTBL1A8MY62 500 aa17.17■□□□□ 0.34
TSPAN4-213ENST00000524895 C9IYK1 514 aa17.17■□□□□ 0.34
TSPAN4-213ENST00000524895 AP5Z1O43299 807 aa17.17■□□□□ 0.34
TSPAN4-213ENST00000524895 ZNF623O75123 536 aa17.17■□□□□ 0.34
TSPAN4-213ENST00000524895 TNNI1P19237 187 aa17.17■□□□□ 0.34
TSPAN4-213ENST00000524895 WNT7BP56706 349 aa17.17■□□□□ 0.34
TSPAN4-213ENST00000524895 KCNH2Q12809 1159 aa17.17■□□□□ 0.34
TSPAN4-213ENST00000524895 PPIGQ13427 754 aaKnown RBP eCLIP17.17■□□□□ 0.34
TSPAN4-213ENST00000524895 IKBKEQ14164 716 aa17.17■□□□□ 0.34
TSPAN4-213ENST00000524895 TCTN1Q2MV58 587 aa17.17■□□□□ 0.34
TSPAN4-213ENST00000524895 SLC10A6Q3KNW5 377 aa17.17■□□□□ 0.34
TSPAN4-213ENST00000524895 MRPL10Q7Z7H8 261 aaKnown RBP17.17■□□□□ 0.34
TSPAN4-213ENST00000524895 RTN4RL1Q86UN2 441 aaPredicted RBP17.17■□□□□ 0.34
TSPAN4-213ENST00000524895 ECHDC2Q86YB7 292 aa17.17■□□□□ 0.34
TSPAN4-213ENST00000524895 WDR49Q8IV35 697 aa17.17■□□□□ 0.34
TSPAN4-213ENST00000524895 CD302Q8IX05 232 aa17.17■□□□□ 0.34
TSPAN4-213ENST00000524895 NAP1L5Q96NT1 182 aaPredicted RBP17.17■□□□□ 0.34
TSPAN4-213ENST00000524895 POP1Q99575 1024 aaKnown RBP17.17■□□□□ 0.34
TSPAN4-213ENST00000524895 RNF39Q9H2S5 420 aa17.17■□□□□ 0.34
TSPAN4-213ENST00000524895 ASB7Q9H672 318 aa17.17■□□□□ 0.34
TSPAN4-213ENST00000524895 PLEKHA5Q9HAU0 1116 aa17.17■□□□□ 0.34
TSPAN4-213ENST00000524895 TTC26A0AVF1 554 aa17.16■□□□□ 0.34
TSPAN4-213ENST00000524895 ENPP3O14638 875 aa17.16■□□□□ 0.34
TSPAN4-213ENST00000524895 N4BP1O75113 896 aaKnown RBP17.16■□□□□ 0.34
TSPAN4-213ENST00000524895 SYN1P17600 705 aa17.16■□□□□ 0.34
TSPAN4-213ENST00000524895 GCLMP48507 274 aa17.16■□□□□ 0.34
TSPAN4-213ENST00000524895 MYL7Q01449 175 aa17.16■□□□□ 0.34
TSPAN4-213ENST00000524895 UBXN1Q04323 297 aa17.16■□□□□ 0.34
TSPAN4-213ENST00000524895 FPGSQ05932 587 aa17.16■□□□□ 0.34
TSPAN4-213ENST00000524895 C1orf220Q5T0J3 134 aa17.16■□□□□ 0.34
TSPAN4-213ENST00000524895 LMBRD2Q68DH5 695 aaPredicted RBP17.16■□□□□ 0.34
TSPAN4-213ENST00000524895 ANP32BQ92688 251 aaKnown RBP17.16■□□□□ 0.34
TSPAN4-213ENST00000524895 BADQ92934 168 aa17.16■□□□□ 0.34
TSPAN4-213ENST00000524895 LPPQ93052 612 aa17.16■□□□□ 0.34
TSPAN4-213ENST00000524895 IL23AQ9NPF7 189 aa17.16■□□□□ 0.34
TSPAN4-213ENST00000524895 UBN1Q9NPG3 1134 aa17.16■□□□□ 0.34
TSPAN4-213ENST00000524895 RTN4Q9NQC3 1192 aaKnown RBP17.16■□□□□ 0.34
TSPAN4-213ENST00000524895 KLK14Q9P0G3 267 aa17.16■□□□□ 0.34
TSPAN4-213ENST00000524895 LTBP2Q14767 1821 aa17.16■□□□□ 0.34
TSPAN4-213ENST00000524895 MEFVO15553 781 aaPredicted RBP17.15■□□□□ 0.34
TSPAN4-213ENST00000524895 EOMESO95936 686 aa17.15■□□□□ 0.34
TSPAN4-213ENST00000524895 NFICP08651 508 aa17.15■□□□□ 0.34
TSPAN4-213ENST00000524895 TMEM191BP0C7N4 346 aa17.15■□□□□ 0.34
TSPAN4-213ENST00000524895 ACTN1P12814 892 aa17.15■□□□□ 0.34
TSPAN4-213ENST00000524895 ATF7P17544 494 aaPredicted RBP17.15■□□□□ 0.34
TSPAN4-213ENST00000524895 GTF2H1P32780 548 aa17.15■□□□□ 0.34
TSPAN4-213ENST00000524895 FMO5P49326 533 aa17.15■□□□□ 0.34
TSPAN4-213ENST00000524895 MXI1P50539 228 aa17.15■□□□□ 0.34
TSPAN4-213ENST00000524895 ZNF75DP51815 510 aa17.15■□□□□ 0.34
TSPAN4-213ENST00000524895 AP3M2P53677 418 aa17.15■□□□□ 0.34
TSPAN4-213ENST00000524895 MCCD1P59942 119 aaPredicted RBP17.15■□□□□ 0.34
TSPAN4-213ENST00000524895 CLDN10P78369 228 aa17.15■□□□□ 0.34
TSPAN4-213ENST00000524895 TFAMQ00059 246 aaKnown RBP17.15■□□□□ 0.34
TSPAN4-213ENST00000524895 PPP3CAQ08209 521 aa17.15■□□□□ 0.34
TSPAN4-213ENST00000524895 TMEM132DQ14C87 1099 aa17.15■□□□□ 0.34
TSPAN4-213ENST00000524895 JADE1Q6IE81 842 aa17.15■□□□□ 0.34
TSPAN4-213ENST00000524895 RPS6KC1Q96S38 1066 aa17.15■□□□□ 0.34
TSPAN4-213ENST00000524895 RSAD1Q9HA92 442 aa17.15■□□□□ 0.34
TSPAN4-213ENST00000524895 TMEM8AQ9HCN3 771 aa17.15■□□□□ 0.34
TSPAN4-213ENST00000524895 RNF216Q9NWF9 866 aaPredicted RBP17.15■□□□□ 0.34
TSPAN4-213ENST00000524895 TMEM161AQ9NX61 479 aa17.15■□□□□ 0.34
TSPAN4-213ENST00000524895 CNTN3Q9P232 1028 aa17.15■□□□□ 0.34
TSPAN4-213ENST00000524895 PCDH10Q9P2E7 1040 aa17.15■□□□□ 0.34
TSPAN4-213ENST00000524895 ZMYND8Q9ULU4 1186 aaPredicted RBP17.15■□□□□ 0.34
TSPAN4-213ENST00000524895 GIT1Q9Y2X7 761 aa17.15■□□□□ 0.34
TSPAN4-213ENST00000524895 PTPRJQ12913 1337 aa17.15■□□□□ 0.34
TSPAN4-213ENST00000524895 MEIS3P2A8K0S8 358 aa17.14■□□□□ 0.33
TSPAN4-213ENST00000524895 EFCAB14O75071 495 aa17.14■□□□□ 0.33
TSPAN4-213ENST00000524895 ADCY5O95622 1261 aa17.14■□□□□ 0.33
TSPAN4-213ENST00000524895 TNNC2P02585 160 aa17.14■□□□□ 0.33
TSPAN4-213ENST00000524895 ACRP10323 421 aa17.14■□□□□ 0.33
TSPAN4-213ENST00000524895 MLH1P40692 756 aa17.14■□□□□ 0.33
TSPAN4-213ENST00000524895 FAM189BP81408 668 aa17.14■□□□□ 0.33
TSPAN4-213ENST00000524895 CETN1Q12798 172 aa17.14■□□□□ 0.33
TSPAN4-213ENST00000524895 BIRC3Q13489 604 aa17.14■□□□□ 0.33
TSPAN4-213ENST00000524895 NR1I3Q14994 352 aa17.14■□□□□ 0.33
TSPAN4-213ENST00000524895 DUOXA2Q1HG44 320 aa17.14■□□□□ 0.33
TSPAN4-213ENST00000524895 CBWD6Q4V339 395 aa17.14■□□□□ 0.33
TSPAN4-213ENST00000524895 CBWD3Q5JTY5 395 aa17.14■□□□□ 0.33
TSPAN4-213ENST00000524895 CBWD5Q5RIA9 395 aa17.14■□□□□ 0.33
TSPAN4-213ENST00000524895 KRT39Q6A163 491 aa17.14■□□□□ 0.33
TSPAN4-213ENST00000524895 AGMOQ6ZNB7 445 aa17.14■□□□□ 0.33
TSPAN4-213ENST00000524895 ZNF598Q86UK7 904 aaKnown RBP17.14■□□□□ 0.33
TSPAN4-213ENST00000524895 NT5DC4Q86YG4 428 aa17.14■□□□□ 0.33
TSPAN4-213ENST00000524895 EFCAB13Q8IY85 973 aa17.14■□□□□ 0.33
TSPAN4-213ENST00000524895 VWCEQ96DN2 955 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms