RNA–Protein interactions for RNA: ENST00000524568.1

NDUFS3-202, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2

Gene NDUFS3, Length 733 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-202ENST00000524568 SYT2Q8N9I0 419 aaPredicted RBP21.44■■□□□ 1.02
NDUFS3-202ENST00000524568 TDRD5Q8NAT2 981 aaKnown RBP21.44■■□□□ 1.02
NDUFS3-202ENST00000524568 C3orf58Q8NDZ4 430 aa21.44■■□□□ 1.02
NDUFS3-202ENST00000524568 ZNF707Q96C28 371 aaPredicted RBP21.44■■□□□ 1.02
NDUFS3-202ENST00000524568 DRC1Q96MC2 740 aa21.44■■□□□ 1.02
NDUFS3-202ENST00000524568 LIMD1Q9UGP4 676 aa21.44■■□□□ 1.02
NDUFS3-202ENST00000524568 PLA2G4BP0C869 781 aa21.43■■□□□ 1.02
NDUFS3-202ENST00000524568 PROZP22891 400 aa21.43■■□□□ 1.02
NDUFS3-202ENST00000524568 IER5LQ5T953 404 aa21.43■■□□□ 1.02
NDUFS3-202ENST00000524568 FAM171A1Q5VUB5 890 aa21.43■■□□□ 1.02
NDUFS3-202ENST00000524568 PBXIP1Q96AQ6 731 aa21.43■■□□□ 1.02
NDUFS3-202ENST00000524568 ZMAT2Q96NC0 199 aaKnown RBP21.43■■□□□ 1.02
NDUFS3-202ENST00000524568 TMEM134Q9H6X4 195 aa21.43■■□□□ 1.02
NDUFS3-202ENST00000524568 SSX2IPQ9Y2D8 614 aa21.43■■□□□ 1.02
NDUFS3-202ENST00000524568 ARIH1Q9Y4X5 557 aaPredicted RBP21.43■■□□□ 1.02
NDUFS3-202ENST00000524568 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.43■■□□□ 1.02
NDUFS3-202ENST00000524568 SF3B1O75533 1304 aaKnown RBP eCLIP21.43■■□□□ 1.02
NDUFS3-202ENST00000524568 NOTCH4Q99466 2003 aa21.43■■□□□ 1.02
NDUFS3-202ENST00000524568 CCDC195A0A1B0GUA6 201 aa21.42■■□□□ 1.02
NDUFS3-202ENST00000524568 I3L4J1 428 aa21.42■■□□□ 1.02
NDUFS3-202ENST00000524568 HARSP12081 509 aaKnown RBP21.42■■□□□ 1.02
NDUFS3-202ENST00000524568 CLCNKBP51801 687 aa21.42■■□□□ 1.02
NDUFS3-202ENST00000524568 VCPP55072 806 aaKnown RBP21.42■■□□□ 1.02
NDUFS3-202ENST00000524568 SEZ6Q53EL9 994 aa21.42■■□□□ 1.02
NDUFS3-202ENST00000524568 ARL6IP4Q66PJ3 421 aaKnown RBP21.42■■□□□ 1.02
NDUFS3-202ENST00000524568 LILRA6Q6PI73 481 aa21.42■■□□□ 1.02
NDUFS3-202ENST00000524568 BMP8AQ7Z5Y6 402 aa21.42■■□□□ 1.02
NDUFS3-202ENST00000524568 CEP57Q86XR8 500 aa21.42■■□□□ 1.02
NDUFS3-202ENST00000524568 TMEM161BQ8NDZ6 487 aa21.42■■□□□ 1.02
NDUFS3-202ENST00000524568 LNX1Q8TBB1 728 aaPredicted RBP21.42■■□□□ 1.02
NDUFS3-202ENST00000524568 CLSTN3Q9BQT9 956 aa21.42■■□□□ 1.02
NDUFS3-202ENST00000524568 MRPL4Q9BYD3 311 aaKnown RBP21.42■■□□□ 1.02
NDUFS3-202ENST00000524568 MYH15Q9Y2K3 1946 aa21.42■■□□□ 1.02
NDUFS3-202ENST00000524568 VPS37CA5D8V6 355 aaPredicted RBP21.41■■□□□ 1.02
NDUFS3-202ENST00000524568 GRM5P41594 1212 aa21.41■■□□□ 1.02
NDUFS3-202ENST00000524568 ALKAL1Q6UXT8 129 aa21.41■■□□□ 1.02
NDUFS3-202ENST00000524568 C15orf39Q6ZRI6 1047 aa21.41■■□□□ 1.02
NDUFS3-202ENST00000524568 CCDC149Q6ZUS6 474 aa21.41■■□□□ 1.02
NDUFS3-202ENST00000524568 ZDHHC14Q8IZN3 488 aa21.41■■□□□ 1.02
NDUFS3-202ENST00000524568 CMASQ8NFW8 434 aaPredicted RBP21.41■■□□□ 1.02
NDUFS3-202ENST00000524568 TTPALQ9BTX7 342 aa21.41■■□□□ 1.02
NDUFS3-202ENST00000524568 HAPLN2Q9GZV7 340 aa21.41■■□□□ 1.02
NDUFS3-202ENST00000524568 BLOC1S4Q9NUP1 217 aa21.41■■□□□ 1.02
NDUFS3-202ENST00000524568 FNIP2Q9P278 1114 aa21.41■■□□□ 1.02
NDUFS3-202ENST00000524568 ANK1P16157 1881 aa21.41■■□□□ 1.02
NDUFS3-202ENST00000524568 SMIM28A0A1B0GU29 152 aa21.4■■□□□ 1.02
NDUFS3-202ENST00000524568 MAPTP10636 758 aaKnown RBP21.4■■□□□ 1.02
NDUFS3-202ENST00000524568 PLS3P13797 630 aa21.4■■□□□ 1.02
NDUFS3-202ENST00000524568 SF3A1Q15459 793 aaKnown RBP21.4■■□□□ 1.02
NDUFS3-202ENST00000524568 XKR4Q5GH76 650 aa21.4■■□□□ 1.02
NDUFS3-202ENST00000524568 FAM173BQ6P4H8 233 aa21.4■■□□□ 1.02
NDUFS3-202ENST00000524568 PIK3R5Q8WYR1 880 aa21.4■■□□□ 1.02
NDUFS3-202ENST00000524568 SNX27Q96L92 541 aa21.4■■□□□ 1.02
NDUFS3-202ENST00000524568 MFSD14AQ96MC6 490 aa21.4■■□□□ 1.02
NDUFS3-202ENST00000524568 NTPCRQ9BSD7 190 aaKnown RBP21.4■■□□□ 1.02
NDUFS3-202ENST00000524568 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.4■■□□□ 1.02
NDUFS3-202ENST00000524568 SORCS3Q9UPU3 1222 aa21.4■■□□□ 1.02
NDUFS3-202ENST00000524568 USTQ9Y2C2 406 aa21.4■■□□□ 1.02
NDUFS3-202ENST00000524568 PLCG1P19174 1290 aa21.39■■□□□ 1.01
NDUFS3-202ENST00000524568 BRCC3P46736 316 aa21.39■■□□□ 1.01
NDUFS3-202ENST00000524568 DHX8Q14562 1220 aaKnown RBP21.39■■□□□ 1.01
NDUFS3-202ENST00000524568 KARSQ15046 597 aaKnown RBP21.39■■□□□ 1.01
NDUFS3-202ENST00000524568 PSMD5Q16401 504 aa21.39■■□□□ 1.01
NDUFS3-202ENST00000524568 UPP1Q16831 310 aa21.39■■□□□ 1.01
NDUFS3-202ENST00000524568 MPZL3Q6UWV2 235 aa21.39■■□□□ 1.01
NDUFS3-202ENST00000524568 RSPO2Q6UXX9 243 aaPredicted RBP21.39■■□□□ 1.01
NDUFS3-202ENST00000524568 USP49Q70CQ1 688 aa21.39■■□□□ 1.01
NDUFS3-202ENST00000524568 FBXL6Q8N531 539 aa21.39■■□□□ 1.01
NDUFS3-202ENST00000524568 PRSS33Q8NF86 280 aa21.39■■□□□ 1.01
NDUFS3-202ENST00000524568 SPIRE2Q8WWL2 714 aa21.39■■□□□ 1.01
NDUFS3-202ENST00000524568 SMG7Q92540 1137 aaKnown RBP21.39■■□□□ 1.01
NDUFS3-202ENST00000524568 C18orf25Q96B23 403 aaPredicted RBP21.39■■□□□ 1.01
NDUFS3-202ENST00000524568 CDK5RAP3Q96JB5 506 aa21.39■■□□□ 1.01
NDUFS3-202ENST00000524568 REEP2Q9BRK0 252 aa21.39■■□□□ 1.01
NDUFS3-202ENST00000524568 NT5C3AQ9H0P0 336 aa21.39■■□□□ 1.01
NDUFS3-202ENST00000524568 ANKFY1Q9P2R3 1169 aa21.39■■□□□ 1.01
NDUFS3-202ENST00000524568 RBM19Q9Y4C8 960 aaKnown RBP21.39■■□□□ 1.01
NDUFS3-202ENST00000524568 CLIC4Q9Y696 253 aa21.39■■□□□ 1.01
NDUFS3-202ENST00000524568 CLUHO75153 1309 aa21.38■■□□□ 1.01
NDUFS3-202ENST00000524568 B3GAT3O94766 335 aa21.38■■□□□ 1.01
NDUFS3-202ENST00000524568 PAPLNO95428 1278 aa21.38■■□□□ 1.01
NDUFS3-202ENST00000524568 TKTP29401 623 aaKnown RBP21.38■■□□□ 1.01
NDUFS3-202ENST00000524568 MTMR3Q13615 1198 aa21.38■■□□□ 1.01
NDUFS3-202ENST00000524568 MCM6Q14566 821 aa21.38■■□□□ 1.01
NDUFS3-202ENST00000524568 SPECC1Q5M775 1068 aa21.38■■□□□ 1.01
NDUFS3-202ENST00000524568 BRAPQ7Z569 592 aa21.38■■□□□ 1.01
NDUFS3-202ENST00000524568 GPBP1Q86WP2 473 aa21.38■■□□□ 1.01
NDUFS3-202ENST00000524568 GPR65Q8IYL9 337 aa21.38■■□□□ 1.01
NDUFS3-202ENST00000524568 ST13P5Q8NFI4 369 aaPredicted RBP21.38■■□□□ 1.01
NDUFS3-202ENST00000524568 MYADMQ96S97 322 aa21.38■■□□□ 1.01
NDUFS3-202ENST00000524568 TIPINQ9BVW5 301 aa21.38■■□□□ 1.01
NDUFS3-202ENST00000524568 CCDC94Q9BW85 323 aaPredicted RBP21.38■■□□□ 1.01
NDUFS3-202ENST00000524568 C17orf75Q9HAS0 396 aa21.38■■□□□ 1.01
NDUFS3-202ENST00000524568 WDR6Q9NNW5 1121 aaKnown RBP21.38■■□□□ 1.01
NDUFS3-202ENST00000524568 FOXD4L1Q9NU39 408 aa21.38■■□□□ 1.01
NDUFS3-202ENST00000524568 FBXW11Q9UKB1 542 aa21.38■■□□□ 1.01
NDUFS3-202ENST00000524568 PIEZO1Q92508 2521 aa21.38■■□□□ 1.01
NDUFS3-202ENST00000524568 TMEM189-UBE2V1I3L0A0 370 aa21.37■■□□□ 1.01
NDUFS3-202ENST00000524568 MCF2P10911 925 aa21.37■■□□□ 1.01
NDUFS3-202ENST00000524568 FGFR3P22607 806 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms