RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	AVPR1B	P47901	424 aa		5.36	□□□□□ -1.55
PCM1-223	ENST00000524356	ANTXR2	P58335	489 aa		5.36	□□□□□ -1.55
PCM1-223	ENST00000524356	POU5F1B	Q06416	359 aa		5.36	□□□□□ -1.55
PCM1-223	ENST00000524356	PIN1	Q13526	163 aa	Predicted RBP	5.36	□□□□□ -1.55
PCM1-223	ENST00000524356	ZRSR2	Q15696	482 aa	Known RBP	5.36	□□□□□ -1.55
PCM1-223	ENST00000524356	C16orf59	Q7L2K0	433 aa		5.36	□□□□□ -1.55
PCM1-223	ENST00000524356	CHPF	Q8IZ52	775 aa		5.36	□□□□□ -1.55
PCM1-223	ENST00000524356	ST13P5	Q8NFI4	369 aa	Predicted RBP	5.36	□□□□□ -1.55
PCM1-223	ENST00000524356	CALML6	Q8TD86	181 aa		5.36	□□□□□ -1.55
PCM1-223	ENST00000524356	ARL8A	Q96BM9	186 aa		5.36	□□□□□ -1.55
PCM1-223	ENST00000524356	FAM193B	Q96PV7	902 aa	Predicted RBP	5.36	□□□□□ -1.55
PCM1-223	ENST00000524356	C1QTNF7	Q9BXJ2	289 aa		5.36	□□□□□ -1.55
PCM1-223	ENST00000524356	CDH19	Q9H159	772 aa		5.36	□□□□□ -1.55
PCM1-223	ENST00000524356	ASB1	Q9Y576	335 aa		5.36	□□□□□ -1.55
PCM1-223	ENST00000524356	SPAG9	O60271	1321 aa	Known RBP	5.36	□□□□□ -1.55
PCM1-223	ENST00000524356	CNTLN	Q9NXG0	1405 aa		5.36	□□□□□ -1.55
PCM1-223	ENST00000524356	LRRC7	Q96NW7	1537 aa		5.36	□□□□□ -1.55
PCM1-223	ENST00000524356	VWDE	Q8N2E2	1590 aa		5.36	□□□□□ -1.55
PCM1-223	ENST00000524356	KIF14	Q15058	1648 aa		5.36	□□□□□ -1.55
PCM1-223	ENST00000524356	NEURL4	Q96JN8	1562 aa		5.35	□□□□□ -1.55
PCM1-223	ENST00000524356	ARHGAP5	Q13017	1502 aa		5.35	□□□□□ -1.55
PCM1-223	ENST00000524356	GOLGA6L22	H0YM25	854 aa		5.35	□□□□□ -1.55
PCM1-223	ENST00000524356	MTMR1	Q13613	665 aa		5.35	□□□□□ -1.55
PCM1-223	ENST00000524356	HLTF	Q14527	1009 aa	Known RBP eCLIP	5.35	□□□□□ -1.55
PCM1-223	ENST00000524356	ERCC6L	Q2NKX8	1250 aa		5.35	□□□□□ -1.55
PCM1-223	ENST00000524356	STRA8	Q7Z7C7	330 aa		5.35	□□□□□ -1.55
PCM1-223	ENST00000524356	CLEC14A	Q86T13	490 aa		5.35	□□□□□ -1.55
PCM1-223	ENST00000524356	NOSTRIN	Q8IVI9	506 aa		5.35	□□□□□ -1.55
PCM1-223	ENST00000524356	PLA2G15	Q8NCC3	412 aa		5.35	□□□□□ -1.55
PCM1-223	ENST00000524356	ATL2	Q8NHH9	583 aa		5.35	□□□□□ -1.55
PCM1-223	ENST00000524356	PPM1E	Q8WY54	764 aa		5.35	□□□□□ -1.55
PCM1-223	ENST00000524356	CAVIN3	Q969G5	261 aa		5.35	□□□□□ -1.55
PCM1-223	ENST00000524356	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	5.35	□□□□□ -1.55
PCM1-223	ENST00000524356	SLC29A3	Q9BZD2	475 aa		5.35	□□□□□ -1.55
PCM1-223	ENST00000524356	PTPRH	Q9HD43	1115 aa		5.35	□□□□□ -1.55
PCM1-223	ENST00000524356	CASS4	Q9NQ75	786 aa		5.35	□□□□□ -1.55
PCM1-223	ENST00000524356	MAP3K20	Q9NYL2	800 aa	Known RBP	5.35	□□□□□ -1.55
PCM1-223	ENST00000524356	DKK2	Q9UBU2	259 aa		5.35	□□□□□ -1.55
PCM1-223	ENST00000524356	TAGLN3	Q9UI15	199 aa		5.35	□□□□□ -1.55
PCM1-223	ENST00000524356	PCDHA8	Q9Y5H6	950 aa		5.35	□□□□□ -1.55
PCM1-223	ENST00000524356	KIDINS220	Q9ULH0	1771 aa		5.34	□□□□□ -1.55
PCM1-223	ENST00000524356	RERE	Q9P2R6	1566 aa		5.34	□□□□□ -1.55
PCM1-223	ENST00000524356	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	5.34	□□□□□ -1.55
PCM1-223	ENST00000524356	TRO	Q12816	1431 aa	Predicted RBP	5.34	□□□□□ -1.55
PCM1-223	ENST00000524356	FOXP2	O15409	715 aa		5.34	□□□□□ -1.55
PCM1-223	ENST00000524356	ADCY3	O60266	1144 aa		5.34	□□□□□ -1.55
PCM1-223	ENST00000524356	MATN4	O95460	622 aa		5.34	□□□□□ -1.55
PCM1-223	ENST00000524356	EYA4	O95677	639 aa		5.34	□□□□□ -1.55
PCM1-223	ENST00000524356	GNAT2	P19087	354 aa		5.34	□□□□□ -1.55
PCM1-223	ENST00000524356	ABCG1	P45844	678 aa		5.34	□□□□□ -1.55
PCM1-223	ENST00000524356	NHLH1	Q02575	133 aa		5.34	□□□□□ -1.55
PCM1-223	ENST00000524356	SPIDR	Q14159	915 aa		5.34	□□□□□ -1.55
PCM1-223	ENST00000524356	CRY1	Q16526	586 aa		5.34	□□□□□ -1.55
PCM1-223	ENST00000524356	SLC4A10	Q6U841	1118 aa		5.34	□□□□□ -1.55
PCM1-223	ENST00000524356	LHFPL2	Q6ZUX7	228 aa		5.34	□□□□□ -1.55
PCM1-223	ENST00000524356	AMOTL1	Q8IY63	956 aa		5.34	□□□□□ -1.55
PCM1-223	ENST00000524356	TCEAL8	Q8IYN2	117 aa		5.34	□□□□□ -1.55
PCM1-223	ENST00000524356	LILRA3	Q8N6C8	439 aa	Predicted RBP	5.34	□□□□□ -1.55
PCM1-223	ENST00000524356	OR5AN1	Q8NGI8	311 aa		5.34	□□□□□ -1.55
PCM1-223	ENST00000524356	ZNF778	Q96MU6	729 aa		5.34	□□□□□ -1.55
PCM1-223	ENST00000524356	NAP1L4	Q99733	375 aa	Known RBP	5.34	□□□□□ -1.55
PCM1-223	ENST00000524356	TARS2	Q9BW92	718 aa	Known RBP	5.34	□□□□□ -1.55
PCM1-223	ENST00000524356	NOB1	Q9ULX3	412 aa	Known RBP	5.34	□□□□□ -1.55
PCM1-223	ENST00000524356	STRCP1	A6NGW2	1772 aa		5.34	□□□□□ -1.56
PCM1-223	ENST00000524356	DNMT1	P26358	1616 aa	Known RBP	5.34	□□□□□ -1.56
PCM1-223	ENST00000524356	CFAP74	Q9C0B2	1584 aa		5.33	□□□□□ -1.56
PCM1-223	ENST00000524356	CPS1	P31327	1500 aa		5.33	□□□□□ -1.56
PCM1-223	ENST00000524356	A2ML1	A8K2U0	1454 aa		5.33	□□□□□ -1.56
PCM1-223	ENST00000524356	NPHP4	O75161	1426 aa	Predicted RBP	5.33	□□□□□ -1.56
PCM1-223	ENST00000524356	TNR	Q92752	1358 aa		5.33	□□□□□ -1.56
PCM1-223	ENST00000524356	ARVCF	O00192	962 aa		5.33	□□□□□ -1.56
PCM1-223	ENST00000524356	SCD	O00767	359 aa		5.33	□□□□□ -1.56
PCM1-223	ENST00000524356	RFPL3	O75679	317 aa		5.33	□□□□□ -1.56
PCM1-223	ENST00000524356	ZNF81	P51508	661 aa		5.33	□□□□□ -1.56
PCM1-223	ENST00000524356	MLC1	Q15049	377 aa		5.33	□□□□□ -1.56
PCM1-223	ENST00000524356	FAM214A	Q32MH5	1076 aa		5.33	□□□□□ -1.56
PCM1-223	ENST00000524356	TMEM95	Q3KNT9	176 aa		5.33	□□□□□ -1.56
PCM1-223	ENST00000524356	GRAMD1B	Q3KR37	738 aa		5.33	□□□□□ -1.56
PCM1-223	ENST00000524356	INO80D	Q53TQ3	878 aa	Predicted RBP	5.33	□□□□□ -1.56
PCM1-223	ENST00000524356	WDR78	Q5VTH9	848 aa		5.33	□□□□□ -1.56
PCM1-223	ENST00000524356	KRT40	Q6A162	431 aa		5.33	□□□□□ -1.56
PCM1-223	ENST00000524356	NXN	Q6DKJ4	435 aa		5.33	□□□□□ -1.56
PCM1-223	ENST00000524356	GRASP	Q7Z6J2	395 aa	Predicted RBP	5.33	□□□□□ -1.56
PCM1-223	ENST00000524356	PCGF5	Q86SE9	256 aa		5.33	□□□□□ -1.56
PCM1-223	ENST00000524356	MTDH	Q86UE4	582 aa	Known RBP	5.33	□□□□□ -1.56
PCM1-223	ENST00000524356	SPICE1	Q8N0Z3	855 aa		5.33	□□□□□ -1.56
PCM1-223	ENST00000524356	E2F7	Q96AV8	911 aa		5.33	□□□□□ -1.56
PCM1-223	ENST00000524356	ZNF669	Q96BR6	464 aa	Predicted RBP	5.33	□□□□□ -1.56
PCM1-223	ENST00000524356	HOOK2	Q96ED9	719 aa		5.33	□□□□□ -1.56
PCM1-223	ENST00000524356	TMX4	Q9H1E5	349 aa	Predicted RBP	5.33	□□□□□ -1.56
PCM1-223	ENST00000524356	NCDN	Q9UBB6	729 aa		5.33	□□□□□ -1.56
PCM1-223	ENST00000524356	SWAP70	Q9UH65	585 aa		5.33	□□□□□ -1.56
PCM1-223	ENST00000524356	EIF2B4	Q9UI10	523 aa	Known RBP	5.33	□□□□□ -1.56
PCM1-223	ENST00000524356	MAPRE3	Q9UPY8	281 aa		5.33	□□□□□ -1.56
PCM1-223	ENST00000524356	CFAP69	A5D8W1	941 aa		5.32	□□□□□ -1.56
PCM1-223	ENST00000524356	NCR1	O76036	304 aa		5.32	□□□□□ -1.56
PCM1-223	ENST00000524356	IGLV2-14	P01704	120 aa		5.32	□□□□□ -1.56
PCM1-223	ENST00000524356	JUN	P05412	331 aa	Known RBP	5.32	□□□□□ -1.56
PCM1-223	ENST00000524356	HKR1	P10072	659 aa		5.32	□□□□□ -1.56
PCM1-223	ENST00000524356	HOXB6	P17509	224 aa	Known RBP	5.32	□□□□□ -1.56

Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms