RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 C1orf53Q5VUE5 145 aa8.46□□□□□ -1.06
SPIDR-223ENST00000524033 KRT79Q5XKE5 535 aa8.46□□□□□ -1.06
SPIDR-223ENST00000524033 MAMDC4Q6UXC1 1216 aa8.46□□□□□ -1.06
SPIDR-223ENST00000524033 EPM2AIP1Q7L775 607 aaPredicted RBP8.46□□□□□ -1.06
SPIDR-223ENST00000524033 IRF2BP2Q7Z5L9 587 aa8.46□□□□□ -1.06
SPIDR-223ENST00000524033 FAM160B2Q86V87 743 aa8.46□□□□□ -1.06
SPIDR-223ENST00000524033 NLRP14Q86W24 1093 aa8.46□□□□□ -1.06
SPIDR-223ENST00000524033 CHST13Q8NET6 341 aa8.46□□□□□ -1.06
SPIDR-223ENST00000524033 SCFD1Q8WVM8 642 aa8.46□□□□□ -1.06
SPIDR-223ENST00000524033 TBC1D5Q92609 795 aa8.46□□□□□ -1.06
SPIDR-223ENST00000524033 TLCD1Q96CP7 247 aa8.46□□□□□ -1.06
SPIDR-223ENST00000524033 CDK5RAP3Q96JB5 506 aa8.46□□□□□ -1.06
SPIDR-223ENST00000524033 HINFPQ9BQA5 517 aa8.46□□□□□ -1.06
SPIDR-223ENST00000524033 NEUROG2Q9H2A3 272 aa8.46□□□□□ -1.06
SPIDR-223ENST00000524033 SLITRK6Q9H5Y7 841 aa8.46□□□□□ -1.06
SPIDR-223ENST00000524033 SIX2Q9NPC8 291 aa8.46□□□□□ -1.06
SPIDR-223ENST00000524033 NLRC4Q9NPP4 1024 aa8.46□□□□□ -1.06
SPIDR-223ENST00000524033 PRDM5Q9NQX1 630 aaPredicted RBP8.46□□□□□ -1.06
SPIDR-223ENST00000524033 HOMER2Q9NSB8 354 aa8.46□□□□□ -1.06
SPIDR-223ENST00000524033 PANK4Q9NVE7 773 aa8.46□□□□□ -1.06
SPIDR-223ENST00000524033 CDV3Q9UKY7 258 aaKnown RBP8.46□□□□□ -1.06
SPIDR-223ENST00000524033 INTUQ9ULD6 942 aa8.46□□□□□ -1.06
SPIDR-223ENST00000524033 TTC7AQ9ULT0 858 aaPredicted RBP8.46□□□□□ -1.06
SPIDR-223ENST00000524033 PHF24Q9UPV7 400 aa8.46□□□□□ -1.06
SPIDR-223ENST00000524033 TRAF3IP3Q9Y228 551 aa8.46□□□□□ -1.06
SPIDR-223ENST00000524033 SYNGAP1Q96PV0 1343 aa8.46□□□□□ -1.06
SPIDR-223ENST00000524033 TRIM43BA6NCK2 446 aa8.45□□□□□ -1.06
SPIDR-223ENST00000524033 CCDC188H7C350 402 aa8.45□□□□□ -1.06
SPIDR-223ENST00000524033 MYO1FO00160 1098 aa8.45□□□□□ -1.06
SPIDR-223ENST00000524033 PIK3CDO00329 1044 aa8.45□□□□□ -1.06
SPIDR-223ENST00000524033 RASSF9O75901 435 aa8.45□□□□□ -1.06
SPIDR-223ENST00000524033 GFPT2O94808 682 aa8.45□□□□□ -1.06
SPIDR-223ENST00000524033 USP8P40818 1118 aa8.45□□□□□ -1.06
SPIDR-223ENST00000524033 ATP1A2P50993 1020 aa8.45□□□□□ -1.06
SPIDR-223ENST00000524033 SLC12A3P55017 1021 aa8.45□□□□□ -1.06
SPIDR-223ENST00000524033 NPEPPSP55786 919 aa8.45□□□□□ -1.06
SPIDR-223ENST00000524033 GUCY1A3Q02108 690 aa8.45□□□□□ -1.06
SPIDR-223ENST00000524033 CNTN2Q02246 1040 aa8.45□□□□□ -1.06
SPIDR-223ENST00000524033 ZNF844Q08AG5 666 aa8.45□□□□□ -1.06
SPIDR-223ENST00000524033 KLHL30Q0D2K2 578 aa8.45□□□□□ -1.06
SPIDR-223ENST00000524033 RAPGEF1Q13905 1077 aa8.45□□□□□ -1.06
SPIDR-223ENST00000524033 SNX17Q15036 470 aa8.45□□□□□ -1.06
SPIDR-223ENST00000524033 EPHA7Q15375 998 aa8.45□□□□□ -1.06
SPIDR-223ENST00000524033 TRADDQ15628 312 aa8.45□□□□□ -1.06
SPIDR-223ENST00000524033 KCNA10Q16322 511 aa8.45□□□□□ -1.06
SPIDR-223ENST00000524033 BMT2Q1RMZ1 405 aa8.45□□□□□ -1.06
SPIDR-223ENST00000524033 C4orf48Q5BLP8 95 aa8.45□□□□□ -1.06
SPIDR-223ENST00000524033 FBXW10Q5XX13 1052 aa8.45□□□□□ -1.06
SPIDR-223ENST00000524033 TTC19Q6DKK2 380 aaPredicted RBP8.45□□□□□ -1.06
SPIDR-223ENST00000524033 MOXD1Q6UVY6 613 aa8.45□□□□□ -1.06
SPIDR-223ENST00000524033 KCTD1Q719H9 257 aa8.45□□□□□ -1.06
SPIDR-223ENST00000524033 Q7L0L9 218 aa8.45□□□□□ -1.06
SPIDR-223ENST00000524033 VASH1Q7L8A9 365 aaPredicted RBP8.45□□□□□ -1.06
SPIDR-223ENST00000524033 ZNF571Q7Z3V5 609 aaPredicted RBP8.45□□□□□ -1.06
SPIDR-223ENST00000524033 FRMD5Q7Z6J6 570 aa8.45□□□□□ -1.06
SPIDR-223ENST00000524033 CCDC65Q8IXS2 484 aa8.45□□□□□ -1.06
SPIDR-223ENST00000524033 ARFGAP2Q8N6H7 521 aa8.45□□□□□ -1.06
SPIDR-223ENST00000524033 SLC17A8Q8NDX2 589 aa8.45□□□□□ -1.06
SPIDR-223ENST00000524033 TPCN2Q8NHX9 752 aa8.45□□□□□ -1.06
SPIDR-223ENST00000524033 TRIM43Q96BQ3 446 aaPredicted RBP8.45□□□□□ -1.06
SPIDR-223ENST00000524033 LRRC45Q96CN5 670 aa8.45□□□□□ -1.06
SPIDR-223ENST00000524033 CYFIP2Q96F07 1278 aa8.45□□□□□ -1.06
SPIDR-223ENST00000524033 CABS1Q96KC9 395 aa8.45□□□□□ -1.06
SPIDR-223ENST00000524033 AGBL1Q96MI9 1066 aa8.45□□□□□ -1.06
SPIDR-223ENST00000524033 UCN2Q96RP3 112 aa8.45□□□□□ -1.06
SPIDR-223ENST00000524033 CCT8L2Q96SF2 557 aa8.45□□□□□ -1.06
SPIDR-223ENST00000524033 NAP1L4Q99733 375 aaKnown RBP8.45□□□□□ -1.06
SPIDR-223ENST00000524033 TSEN34Q9BSV6 310 aaKnown RBP8.45□□□□□ -1.06
SPIDR-223ENST00000524033 SYT11Q9BT88 431 aa8.45□□□□□ -1.06
SPIDR-223ENST00000524033 NT5C3AQ9H0P0 336 aa8.45□□□□□ -1.06
SPIDR-223ENST00000524033 ACTR5Q9H9F9 607 aaPredicted RBP8.45□□□□□ -1.06
SPIDR-223ENST00000524033 KCNMB3Q9NPA1 279 aa8.45□□□□□ -1.06
SPIDR-223ENST00000524033 SUCLA2Q9P2R7 463 aaPredicted RBP8.45□□□□□ -1.06
SPIDR-223ENST00000524033 PACSIN2Q9UNF0 486 aaPredicted RBP8.45□□□□□ -1.06
SPIDR-223ENST00000524033 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.45□□□□□ -1.06
SPIDR-223ENST00000524033 PLXNB2O15031 1838 aa8.45□□□□□ -1.06
SPIDR-223ENST00000524033 ZNFX1Q9P2E3 1918 aaKnown RBP8.44□□□□□ -1.06
SPIDR-223ENST00000524033 CYP3A7-CYP3A51PA0A087WV96 503 aa8.44□□□□□ -1.06
SPIDR-223ENST00000524033 PNMA6FA0A0J9YX94 578 aa8.44□□□□□ -1.06
SPIDR-223ENST00000524033 A0A1W2PQ45 241 aaPredicted RBP8.44□□□□□ -1.06
SPIDR-223ENST00000524033 A0A1W2PQY0 241 aa8.44□□□□□ -1.06
SPIDR-223ENST00000524033 PGRMC1O00264 195 aaKnown RBP8.44□□□□□ -1.06
SPIDR-223ENST00000524033 SLC16A3O15427 465 aaKnown RBP8.44□□□□□ -1.06
SPIDR-223ENST00000524033 TRAPPC3O43617 180 aa8.44□□□□□ -1.06
SPIDR-223ENST00000524033 PLA2G6O60733 806 aa8.44□□□□□ -1.06
SPIDR-223ENST00000524033 PQBP1O60828 265 aaKnown RBP8.44□□□□□ -1.06
SPIDR-223ENST00000524033 DUSP11O75319 330 aaKnown RBP8.44□□□□□ -1.06
SPIDR-223ENST00000524033 KIAA0754O94854 1291 aa8.44□□□□□ -1.06
SPIDR-223ENST00000524033 PLA2G4BP0C869 781 aa8.44□□□□□ -1.06
SPIDR-223ENST00000524033 CYP3A7P24462 503 aa8.44□□□□□ -1.06
SPIDR-223ENST00000524033 GUCY2FP51841 1108 aa8.44□□□□□ -1.06
SPIDR-223ENST00000524033 ACLYP53396 1101 aa8.44□□□□□ -1.06
SPIDR-223ENST00000524033 SMTNP53814 917 aa8.44□□□□□ -1.06
SPIDR-223ENST00000524033 SNAP25P60880 206 aa8.44□□□□□ -1.06
SPIDR-223ENST00000524033 SPIRE1Q08AE8 756 aa8.44□□□□□ -1.06
SPIDR-223ENST00000524033 ZNF543Q08ER8 600 aa8.44□□□□□ -1.06
SPIDR-223ENST00000524033 MTMR3Q13615 1198 aa8.44□□□□□ -1.06
SPIDR-223ENST00000524033 RPS6KA1Q15418 735 aa8.44□□□□□ -1.06
SPIDR-223ENST00000524033 NFIL3Q16649 462 aa8.44□□□□□ -1.06
SPIDR-223ENST00000524033 IFI16Q16666 785 aaKnown RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms