RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 RARBP10826 455 aa8.94□□□□□ -0.98
CSMD1-213ENST00000523488 DR1Q01658 176 aa8.94□□□□□ -0.98
CSMD1-213ENST00000523488 PTK2Q05397 1052 aa8.94□□□□□ -0.98
CSMD1-213ENST00000523488 PTP4A2Q12974 167 aa8.94□□□□□ -0.98
CSMD1-213ENST00000523488 KIF22Q14807 665 aa8.94□□□□□ -0.98
CSMD1-213ENST00000523488 DCLRE1AQ6PJP8 1040 aa8.94□□□□□ -0.98
CSMD1-213ENST00000523488 PPP1R21Q6ZMI0 780 aa8.94□□□□□ -0.98
CSMD1-213ENST00000523488 KCTD17Q8N5Z5 321 aa8.94□□□□□ -0.98
CSMD1-213ENST00000523488 SCG3Q8WXD2 468 aaKnown RBP8.94□□□□□ -0.98
CSMD1-213ENST00000523488 BTBD9Q96Q07 612 aa8.94□□□□□ -0.98
CSMD1-213ENST00000523488 CENPKQ9BS16 269 aa8.94□□□□□ -0.98
CSMD1-213ENST00000523488 SLC2A11Q9BYW1 496 aa8.94□□□□□ -0.98
CSMD1-213ENST00000523488 ZNF696Q9H7X3 374 aa8.94□□□□□ -0.98
CSMD1-213ENST00000523488 NKIRAS1Q9NYS0 192 aa8.94□□□□□ -0.98
CSMD1-213ENST00000523488 ADAMTS1Q9UHI8 967 aa8.94□□□□□ -0.98
CSMD1-213ENST00000523488 RASAL2Q9UJF2 1139 aa8.94□□□□□ -0.98
CSMD1-213ENST00000523488 MROH5Q6ZUA9 1318 aa8.94□□□□□ -0.98
CSMD1-213ENST00000523488 A0A088AWK7 358 aa8.94□□□□□ -0.98
CSMD1-213ENST00000523488 GSC2O15499 205 aa8.94□□□□□ -0.98
CSMD1-213ENST00000523488 TBX10O75333 385 aa8.94□□□□□ -0.98
CSMD1-213ENST00000523488 UBTFL6P0CB48 400 aaPredicted RBP8.94□□□□□ -0.98
CSMD1-213ENST00000523488 FCER1AP12319 257 aa8.94□□□□□ -0.98
CSMD1-213ENST00000523488 KRT13P13646 458 aa8.94□□□□□ -0.98
CSMD1-213ENST00000523488 PLCG1P19174 1290 aa8.94□□□□□ -0.98
CSMD1-213ENST00000523488 RGS2P41220 211 aa8.94□□□□□ -0.98
CSMD1-213ENST00000523488 RTP1P59025 263 aa8.94□□□□□ -0.98
CSMD1-213ENST00000523488 RNASELQ05823 741 aaKnown RBP8.94□□□□□ -0.98
CSMD1-213ENST00000523488 TCERG1LQ5VWI1 586 aa8.94□□□□□ -0.98
CSMD1-213ENST00000523488 ARMCX6Q7L4S7 300 aa8.94□□□□□ -0.98
CSMD1-213ENST00000523488 ADAT2Q7Z6V5 191 aaKnown RBP8.94□□□□□ -0.98
CSMD1-213ENST00000523488 CDK5RAP3Q96JB5 506 aa8.94□□□□□ -0.98
CSMD1-213ENST00000523488 LBHD1Q9BQE6 289 aaPredicted RBP8.94□□□□□ -0.98
CSMD1-213ENST00000523488 SEMA4AQ9H3S1 761 aa8.94□□□□□ -0.98
CSMD1-213ENST00000523488 DBR1Q9UK59 544 aaKnown RBP8.94□□□□□ -0.98
CSMD1-213ENST00000523488 PAIP2BQ9ULR5 123 aaKnown RBP8.94□□□□□ -0.98
CSMD1-213ENST00000523488 BARX2Q9UMQ3 279 aaPredicted RBP8.94□□□□□ -0.98
CSMD1-213ENST00000523488 CHMP2BQ9UQN3 213 aa8.94□□□□□ -0.98
CSMD1-213ENST00000523488 PASKQ96RG2 1323 aa8.94□□□□□ -0.98
CSMD1-213ENST00000523488 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.93□□□□□ -0.98
CSMD1-213ENST00000523488 TMEM120BA0PK00 339 aa8.93□□□□□ -0.98
CSMD1-213ENST00000523488 MIF4GDA9UHW6 222 aaKnown RBP8.93□□□□□ -0.98
CSMD1-213ENST00000523488 GRM4Q14833 912 aa8.93□□□□□ -0.98
CSMD1-213ENST00000523488 SPCS2Q15005 226 aa8.93□□□□□ -0.98
CSMD1-213ENST00000523488 HLFQ16534 295 aa8.93□□□□□ -0.98
CSMD1-213ENST00000523488 KBTBD12Q3ZCT8 623 aa8.93□□□□□ -0.98
CSMD1-213ENST00000523488 SYCP2LQ5T4T6 812 aa8.93□□□□□ -0.98
CSMD1-213ENST00000523488 SNX30Q5VWJ9 437 aa8.93□□□□□ -0.98
CSMD1-213ENST00000523488 CC2D2BQ6DHV5 1058 aa8.93□□□□□ -0.98
CSMD1-213ENST00000523488 DNAJC14Q6Y2X3 702 aaPredicted RBP8.93□□□□□ -0.98
CSMD1-213ENST00000523488 DTHD1Q6ZMT9 781 aa8.93□□□□□ -0.98
CSMD1-213ENST00000523488 SLC15A3Q8IY34 581 aa8.93□□□□□ -0.98
CSMD1-213ENST00000523488 BLIDQ8IZY5 108 aa8.93□□□□□ -0.98
CSMD1-213ENST00000523488 NUP93Q8N1F7 819 aa8.93□□□□□ -0.98
CSMD1-213ENST00000523488 SPATA5Q8NB90 893 aa8.93□□□□□ -0.98
CSMD1-213ENST00000523488 LNX1Q8TBB1 728 aaPredicted RBP8.93□□□□□ -0.98
CSMD1-213ENST00000523488 FBXO25Q8TCJ0 367 aa8.93□□□□□ -0.98
CSMD1-213ENST00000523488 EPS8L3Q8TE67 593 aaKnown RBP8.93□□□□□ -0.98
CSMD1-213ENST00000523488 PSPC1Q8WXF1 523 aaKnown RBP8.93□□□□□ -0.98
CSMD1-213ENST00000523488 RFFLQ8WZ73 363 aa8.93□□□□□ -0.98
CSMD1-213ENST00000523488 ARHGEF1Q92888 912 aaKnown RBP8.93□□□□□ -0.98
CSMD1-213ENST00000523488 TEKT1Q969V4 418 aa8.93□□□□□ -0.98
CSMD1-213ENST00000523488 NLRP4Q96MN2 994 aa8.93□□□□□ -0.98
CSMD1-213ENST00000523488 CGREF1Q99674 301 aa8.93□□□□□ -0.98
CSMD1-213ENST00000523488 BTBD10Q9BSF8 475 aa8.93□□□□□ -0.98
CSMD1-213ENST00000523488 TRIM51Q9BSJ1 452 aa8.93□□□□□ -0.98
CSMD1-213ENST00000523488 MXD3Q9BW11 206 aa8.93□□□□□ -0.98
CSMD1-213ENST00000523488 SNED1Q8TER0 1413 aa8.93□□□□□ -0.98
CSMD1-213ENST00000523488 EML1O00423 815 aa8.93□□□□□ -0.98
CSMD1-213ENST00000523488 PDE8BO95263 885 aa8.93□□□□□ -0.98
CSMD1-213ENST00000523488 ZBED1O96006 694 aa8.93□□□□□ -0.98
CSMD1-213ENST00000523488 ZCCHC18P0CG32 403 aa8.93□□□□□ -0.98
CSMD1-213ENST00000523488 TXNRD1Q16881 649 aa8.93□□□□□ -0.98
CSMD1-213ENST00000523488 ZC2HC1CQ53FD0 456 aaPredicted RBP8.93□□□□□ -0.98
CSMD1-213ENST00000523488 KLC3Q6P597 504 aa8.93□□□□□ -0.98
CSMD1-213ENST00000523488 HS2ST1Q7LGA3 356 aa8.93□□□□□ -0.98
CSMD1-213ENST00000523488 CLNKQ7Z7G1 428 aa8.93□□□□□ -0.98
CSMD1-213ENST00000523488 CHSY1Q86X52 802 aa8.93□□□□□ -0.98
CSMD1-213ENST00000523488 CCNJLQ8IV13 435 aa8.93□□□□□ -0.98
CSMD1-213ENST00000523488 TTC8Q8TAM2 541 aa8.93□□□□□ -0.98
CSMD1-213ENST00000523488 DYDC2Q96IM9 177 aa8.93□□□□□ -0.98
CSMD1-213ENST00000523488 GOLPH3Q9H4A6 298 aa8.93□□□□□ -0.98
CSMD1-213ENST00000523488 ANKFY1Q9P2R3 1169 aa8.93□□□□□ -0.98
CSMD1-213ENST00000523488 HERC5Q9UII4 1024 aaKnown RBP8.93□□□□□ -0.98
CSMD1-213ENST00000523488 CDH7Q9ULB5 785 aa8.93□□□□□ -0.98
CSMD1-213ENST00000523488 SNX24Q9Y343 169 aa8.93□□□□□ -0.98
CSMD1-213ENST00000523488 CCDC160A6NGH7 325 aa8.93□□□□□ -0.98
CSMD1-213ENST00000523488 MYMKA6NI61 221 aa8.93□□□□□ -0.98
CSMD1-213ENST00000523488 ZNF701M0R085 212 aaPredicted RBP8.93□□□□□ -0.98
CSMD1-213ENST00000523488 MAP3K7O43318 606 aa8.93□□□□□ -0.98
CSMD1-213ENST00000523488 ZWINTO95229 277 aa8.93□□□□□ -0.98
CSMD1-213ENST00000523488 PORP16435 677 aaPredicted RBP8.93□□□□□ -0.98
CSMD1-213ENST00000523488 CLK2P49760 499 aaKnown RBP8.93□□□□□ -0.98
CSMD1-213ENST00000523488 OXCT1P55809 520 aa8.93□□□□□ -0.98
CSMD1-213ENST00000523488 HAUS1Q96CS2 278 aa8.93□□□□□ -0.98
CSMD1-213ENST00000523488 ERP27Q96DN0 273 aa8.93□□□□□ -0.98
CSMD1-213ENST00000523488 BARHL2Q9NY43 387 aa8.93□□□□□ -0.98
CSMD1-213ENST00000523488 CNTN3Q9P232 1028 aa8.93□□□□□ -0.98
CSMD1-213ENST00000523488 HAO1Q9UJM8 370 aa8.93□□□□□ -0.98
CSMD1-213ENST00000523488 ZNF148Q9UQR1 794 aa8.93□□□□□ -0.98
CSMD1-213ENST00000523488 TELO2Q9Y4R8 837 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms