RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 DBF4BQ8NFT6 615 aa10.12□□□□□ -0.79
SDCBP-212ENST00000523483 SPAG5Q96R06 1193 aa10.12□□□□□ -0.79
SDCBP-212ENST00000523483 TMEM117Q9H0C3 514 aa10.12□□□□□ -0.79
SDCBP-212ENST00000523483 CXCL16Q9H2A7 254 aa10.12□□□□□ -0.79
SDCBP-212ENST00000523483 PTPRHQ9HD43 1115 aa10.12□□□□□ -0.79
SDCBP-212ENST00000523483 PCDHB2Q9Y5E7 798 aa10.12□□□□□ -0.79
SDCBP-212ENST00000523483 CCDC85CA6NKD9 419 aa10.11□□□□□ -0.79
SDCBP-212ENST00000523483 UPP2O95045 317 aa10.11□□□□□ -0.79
SDCBP-212ENST00000523483 NFICP08651 508 aa10.11□□□□□ -0.79
SDCBP-212ENST00000523483 RAG1P15918 1043 aa10.11□□□□□ -0.79
SDCBP-212ENST00000523483 KRT9P35527 623 aa10.11□□□□□ -0.79
SDCBP-212ENST00000523483 CDK7P50613 346 aa10.11□□□□□ -0.79
SDCBP-212ENST00000523483 FAAP100Q0VG06 881 aa10.11□□□□□ -0.79
SDCBP-212ENST00000523483 TRPC3Q13507 836 aa10.11□□□□□ -0.79
SDCBP-212ENST00000523483 MYBPC2Q14324 1141 aa10.11□□□□□ -0.79
SDCBP-212ENST00000523483 MBTPS1Q14703 1052 aa10.11□□□□□ -0.79
SDCBP-212ENST00000523483 TSR1Q2NL82 804 aaKnown RBP10.11□□□□□ -0.79
SDCBP-212ENST00000523483 KRT39Q6A163 491 aa10.11□□□□□ -0.79
SDCBP-212ENST00000523483 FAM117BQ6P1L5 589 aa10.11□□□□□ -0.79
SDCBP-212ENST00000523483 BRSK2Q8IWQ3 736 aa10.11□□□□□ -0.79
SDCBP-212ENST00000523483 RABGGTAQ92696 567 aa10.11□□□□□ -0.79
SDCBP-212ENST00000523483 PRDM10Q9NQV6 1147 aa10.11□□□□□ -0.79
SDCBP-212ENST00000523483 IPPQ9Y573 584 aa10.11□□□□□ -0.79
SDCBP-212ENST00000523483 PNMA6AP0CW24 399 aaPredicted RBP10.11□□□□□ -0.79
SDCBP-212ENST00000523483 FXR1P51114 621 aaKnown RBP eCLIP10.11□□□□□ -0.79
SDCBP-212ENST00000523483 FOXR2Q6PJQ5 311 aa10.11□□□□□ -0.79
SDCBP-212ENST00000523483 ZC3H3Q8IXZ2 948 aaKnown RBP10.11□□□□□ -0.79
SDCBP-212ENST00000523483 CAGE1Q8TC20 777 aa10.11□□□□□ -0.79
SDCBP-212ENST00000523483 BORCS6Q96GS4 357 aa10.11□□□□□ -0.79
SDCBP-212ENST00000523483 FAM105AQ9NUU6 356 aa10.11□□□□□ -0.79
SDCBP-212ENST00000523483 CPSF3Q9UKF6 684 aaKnown RBP10.11□□□□□ -0.79
SDCBP-212ENST00000523483 LUC7L2Q9Y383 392 aaKnown RBP10.11□□□□□ -0.79
SDCBP-212ENST00000523483 STYXL1Q9Y6J8 313 aa10.11□□□□□ -0.79
SDCBP-212ENST00000523483 TTC26A0AVF1 554 aa10.11□□□□□ -0.79
SDCBP-212ENST00000523483 ABLIM1O14639 778 aa10.11□□□□□ -0.79
SDCBP-212ENST00000523483 PROZP22891 400 aa10.11□□□□□ -0.79
SDCBP-212ENST00000523483 MLH1P40692 756 aa10.11□□□□□ -0.79
SDCBP-212ENST00000523483 CDR1P51861 262 aa10.11□□□□□ -0.79
SDCBP-212ENST00000523483 NFIL3Q16649 462 aa10.11□□□□□ -0.79
SDCBP-212ENST00000523483 DCAF4L1Q3SXM0 396 aa10.11□□□□□ -0.79
SDCBP-212ENST00000523483 JADE1Q6IE81 842 aa10.11□□□□□ -0.79
SDCBP-212ENST00000523483 SPOPLQ6IQ16 392 aa10.11□□□□□ -0.79
SDCBP-212ENST00000523483 SCARA5Q6ZMJ2 495 aa10.11□□□□□ -0.79
SDCBP-212ENST00000523483 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.11□□□□□ -0.79
SDCBP-212ENST00000523483 SLC43A3Q8NBI5 491 aa10.11□□□□□ -0.79
SDCBP-212ENST00000523483 FBXL18Q96ME1 805 aa10.11□□□□□ -0.79
SDCBP-212ENST00000523483 RPS6KC1Q96S38 1066 aa10.11□□□□□ -0.79
SDCBP-212ENST00000523483 CACNG4Q9UBN1 327 aa10.11□□□□□ -0.79
SDCBP-212ENST00000523483 NXF1Q9UBU9 619 aaKnown RBP10.11□□□□□ -0.79
SDCBP-212ENST00000523483 PRKAG2Q9UGJ0 569 aa10.11□□□□□ -0.79
SDCBP-212ENST00000523483 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.11□□□□□ -0.79
SDCBP-212ENST00000523483 KIAA0391O15091 583 aaKnown RBP10.1□□□□□ -0.79
SDCBP-212ENST00000523483 MGEA5O60502 916 aa10.1□□□□□ -0.79
SDCBP-212ENST00000523483 TNNC2P02585 160 aa10.1□□□□□ -0.79
SDCBP-212ENST00000523483 GYPCP04921 128 aa10.1□□□□□ -0.79
SDCBP-212ENST00000523483 MARSP56192 900 aaKnown RBP10.1□□□□□ -0.79
SDCBP-212ENST00000523483 MGAT3Q09327 533 aa10.1□□□□□ -0.79
SDCBP-212ENST00000523483 TRIM71Q2Q1W2 868 aaKnown RBP10.1□□□□□ -0.79
SDCBP-212ENST00000523483 SLC10A6Q3KNW5 377 aa10.1□□□□□ -0.79
SDCBP-212ENST00000523483 ANKRD36BP1Q96IX9 119 aa10.1□□□□□ -0.79
SDCBP-212ENST00000523483 PDLIM2Q96JY6 352 aa10.1□□□□□ -0.79
SDCBP-212ENST00000523483 MFSD14AQ96MC6 490 aa10.1□□□□□ -0.79
SDCBP-212ENST00000523483 GAD1Q99259 594 aa10.1□□□□□ -0.79
SDCBP-212ENST00000523483 IMPG2Q9BZV3 1241 aa10.1□□□□□ -0.79
SDCBP-212ENST00000523483 RPLP2P05387 115 aaKnown RBP10.1□□□□□ -0.79
SDCBP-212ENST00000523483 CLTBP09497 229 aa10.1□□□□□ -0.79
SDCBP-212ENST00000523483 ITGA4P13612 1032 aa10.1□□□□□ -0.79
SDCBP-212ENST00000523483 SYN1P17600 705 aa10.1□□□□□ -0.79
SDCBP-212ENST00000523483 KCNMA1Q12791 1236 aa10.1□□□□□ -0.79
SDCBP-212ENST00000523483 PSMD6Q15008 389 aa10.1□□□□□ -0.79
SDCBP-212ENST00000523483 DUOXA2Q1HG44 320 aa10.1□□□□□ -0.79
SDCBP-212ENST00000523483 SCARA3Q6AZY7 606 aa10.1□□□□□ -0.79
SDCBP-212ENST00000523483 EFCAB13Q8IY85 973 aa10.1□□□□□ -0.79
SDCBP-212ENST00000523483 FBXL13Q8NEE6 735 aa10.1□□□□□ -0.79
SDCBP-212ENST00000523483 ZNF516Q92618 1163 aa10.1□□□□□ -0.79
SDCBP-212ENST00000523483 GOLGA2P5Q9HBQ8 144 aa10.1□□□□□ -0.79
SDCBP-212ENST00000523483 AKR1B15C9JRZ8 316 aaPredicted RBP10.1□□□□□ -0.79
SDCBP-212ENST00000523483 RNF225M0QZC1 329 aaPredicted RBP10.1□□□□□ -0.79
SDCBP-212ENST00000523483 NBNO60934 754 aa10.1□□□□□ -0.79
SDCBP-212ENST00000523483 POMCP01189 267 aa10.1□□□□□ -0.79
SDCBP-212ENST00000523483 ITGB3P05106 788 aa10.1□□□□□ -0.79
SDCBP-212ENST00000523483 PON1P27169 355 aa10.1□□□□□ -0.79
SDCBP-212ENST00000523483 TMEM132DQ14C87 1099 aa10.1□□□□□ -0.79
SDCBP-212ENST00000523483 TDRD12Q587J7 1177 aaKnown RBP10.1□□□□□ -0.79
SDCBP-212ENST00000523483 C1orf220Q5T0J3 134 aa10.1□□□□□ -0.79
SDCBP-212ENST00000523483 TDRD10Q5VZ19 366 aaKnown RBP10.1□□□□□ -0.79
SDCBP-212ENST00000523483 TRIM65Q6PJ69 517 aa10.1□□□□□ -0.79
SDCBP-212ENST00000523483 ZNF397Q8NF99 534 aaPredicted RBP10.1□□□□□ -0.79
SDCBP-212ENST00000523483 INTS2Q9H0H0 1204 aaKnown RBP10.1□□□□□ -0.79
SDCBP-212ENST00000523483 TMEM8AQ9HCN3 771 aa10.1□□□□□ -0.79
SDCBP-212ENST00000523483 UBE2TQ9NPD8 197 aaPredicted RBP10.1□□□□□ -0.79
SDCBP-212ENST00000523483 CD4P01730 458 aa10.09□□□□□ -0.79
SDCBP-212ENST00000523483 ACRP10323 421 aa10.09□□□□□ -0.79
SDCBP-212ENST00000523483 AXLP30530 894 aa10.09□□□□□ -0.79
SDCBP-212ENST00000523483 AFF1P51825 1210 aaKnown RBP10.09□□□□□ -0.79
SDCBP-212ENST00000523483 WDR44Q5JSH3 913 aa10.09□□□□□ -0.79
SDCBP-212ENST00000523483 COL13A1Q5TAT6 717 aaPredicted RBP10.09□□□□□ -0.79
SDCBP-212ENST00000523483 HACE1Q8IYU2 909 aa10.09□□□□□ -0.79
SDCBP-212ENST00000523483 CCDC150Q8NCX0 1101 aa10.09□□□□□ -0.79
SDCBP-212ENST00000523483 CACTINQ8WUQ7 758 aaKnown RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms