RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 RSPO2Q6UXX9 243 aaPredicted RBP12.92□□□□□ -0.34
SDCBP-211ENST00000523441 PRR23CQ6ZRP0 262 aa12.92□□□□□ -0.34
SDCBP-211ENST00000523441 SKAP1Q86WV1 359 aa12.92□□□□□ -0.34
SDCBP-211ENST00000523441 TPH2Q8IWU9 490 aa12.92□□□□□ -0.34
SDCBP-211ENST00000523441 GSTCDQ8NEC7 633 aa12.92□□□□□ -0.34
SDCBP-211ENST00000523441 ASAP3Q8TDY4 903 aa12.92□□□□□ -0.34
SDCBP-211ENST00000523441 CCDC43Q96MW1 224 aaKnown RBP12.92□□□□□ -0.34
SDCBP-211ENST00000523441 JAKMIP1Q96N16 626 aaKnown RBP12.92□□□□□ -0.34
SDCBP-211ENST00000523441 CXCL16Q9H2A7 254 aa12.92□□□□□ -0.34
SDCBP-211ENST00000523441 I3L4J1 428 aa12.91□□□□□ -0.34
SDCBP-211ENST00000523441 ASAP2O43150 1006 aa12.91□□□□□ -0.34
SDCBP-211ENST00000523441 DKC1O60832 514 aaKnown RBP eCLIP12.91□□□□□ -0.34
SDCBP-211ENST00000523441 DTNBO60941 627 aa12.91□□□□□ -0.34
SDCBP-211ENST00000523441 P4HBP07237 508 aaKnown RBP12.91□□□□□ -0.34
SDCBP-211ENST00000523441 RHOP08100 348 aa12.91□□□□□ -0.34
SDCBP-211ENST00000523441 IGFBP6P24592 240 aaPredicted RBP12.91□□□□□ -0.34
SDCBP-211ENST00000523441 AXLP30530 894 aa12.91□□□□□ -0.34
SDCBP-211ENST00000523441 RPS9P46781 194 aaKnown RBP12.91□□□□□ -0.34
SDCBP-211ENST00000523441 NRLP54845 237 aa12.91□□□□□ -0.34
SDCBP-211ENST00000523441 PTENP60484 403 aa12.91□□□□□ -0.34
SDCBP-211ENST00000523441 MBTD1Q05BQ5 628 aa12.91□□□□□ -0.34
SDCBP-211ENST00000523441 TUSC3Q13454 348 aa12.91□□□□□ -0.34
SDCBP-211ENST00000523441 FZD5Q13467 585 aa12.91□□□□□ -0.34
SDCBP-211ENST00000523441 CAPSQ13938 189 aa12.91□□□□□ -0.34
SDCBP-211ENST00000523441 TFDP1Q14186 410 aa12.91□□□□□ -0.34
SDCBP-211ENST00000523441 PPP2R5DQ14738 602 aa12.91□□□□□ -0.34
SDCBP-211ENST00000523441 AASDHQ4L235 1098 aaPredicted RBP12.91□□□□□ -0.34
SDCBP-211ENST00000523441 IL31Q6EBC2 164 aa12.91□□□□□ -0.34
SDCBP-211ENST00000523441 SLC27A1Q6PCB7 646 aa12.91□□□□□ -0.34
SDCBP-211ENST00000523441 POTEHQ6S545 545 aa12.91□□□□□ -0.34
SDCBP-211ENST00000523441 OTUD6AQ7L8S5 288 aa12.91□□□□□ -0.34
SDCBP-211ENST00000523441 EXOC8Q8IYI6 725 aa12.91□□□□□ -0.34
SDCBP-211ENST00000523441 PIK3R5Q8WYR1 880 aa12.91□□□□□ -0.34
SDCBP-211ENST00000523441 NELL1Q92832 810 aa12.91□□□□□ -0.34
SDCBP-211ENST00000523441 BORCS6Q96GS4 357 aa12.91□□□□□ -0.34
SDCBP-211ENST00000523441 AIFM3Q96NN9 605 aa12.91□□□□□ -0.34
SDCBP-211ENST00000523441 CORO1BQ9BR76 489 aa12.91□□□□□ -0.34
SDCBP-211ENST00000523441 ANGPTL2Q9UKU9 493 aa12.91□□□□□ -0.34
SDCBP-211ENST00000523441 PCDHA4Q9UN74 947 aa12.91□□□□□ -0.34
SDCBP-211ENST00000523441 USP20Q9Y2K6 914 aa12.91□□□□□ -0.34
SDCBP-211ENST00000523441 CDY1Q9Y6F8 540 aa12.91□□□□□ -0.34
SDCBP-211ENST00000523441 TRIP11Q15643 1979 aa12.9□□□□□ -0.34
SDCBP-211ENST00000523441 NRG2O14511 850 aaPredicted RBP12.9□□□□□ -0.34
SDCBP-211ENST00000523441 RETP07949 1114 aa12.9□□□□□ -0.34
SDCBP-211ENST00000523441 GDI1P31150 447 aa12.9□□□□□ -0.34
SDCBP-211ENST00000523441 HOXC13P31276 330 aa12.9□□□□□ -0.34
SDCBP-211ENST00000523441 KRT32Q14532 448 aa12.9□□□□□ -0.34
SDCBP-211ENST00000523441 SF3A2Q15428 464 aaKnown RBP12.9□□□□□ -0.34
SDCBP-211ENST00000523441 N4BP2L1Q5TBK1 243 aaPredicted RBP12.9□□□□□ -0.34
SDCBP-211ENST00000523441 CEP68Q76N32 757 aa12.9□□□□□ -0.34
SDCBP-211ENST00000523441 GPIHBP1Q8IV16 184 aa12.9□□□□□ -0.34
SDCBP-211ENST00000523441 BLIDQ8IZY5 108 aa12.9□□□□□ -0.34
SDCBP-211ENST00000523441 TTC8Q8TAM2 541 aa12.9□□□□□ -0.34
SDCBP-211ENST00000523441 FAM3CQ92520 227 aa12.9□□□□□ -0.34
SDCBP-211ENST00000523441 TCEAL4Q96EI5 215 aa12.9□□□□□ -0.34
SDCBP-211ENST00000523441 CCDC51Q96ER9 411 aa12.9□□□□□ -0.34
SDCBP-211ENST00000523441 LARP6Q9BRS8 491 aaKnown RBP12.9□□□□□ -0.34
SDCBP-211ENST00000523441 RNF26Q9BY78 433 aaPredicted RBP12.9□□□□□ -0.34
SDCBP-211ENST00000523441 XPNPEP1Q9NQW7 623 aa12.9□□□□□ -0.34
SDCBP-211ENST00000523441 RBM12Q9NTZ6 932 aaKnown RBP12.9□□□□□ -0.34
SDCBP-211ENST00000523441 SNTG2Q9NY99 539 aa12.9□□□□□ -0.34
SDCBP-211ENST00000523441 VAV3Q9UKW4 847 aa12.9□□□□□ -0.34
SDCBP-211ENST00000523441 GDAQ9Y2T3 454 aa12.9□□□□□ -0.34
SDCBP-211ENST00000523441 PIAS3Q9Y6X2 628 aa12.9□□□□□ -0.34
SDCBP-211ENST00000523441 CYP3A7-CYP3A51PA0A087WV96 503 aa12.89□□□□□ -0.35
SDCBP-211ENST00000523441 LRRIQ4A6NIV6 560 aa12.89□□□□□ -0.35
SDCBP-211ENST00000523441 SHISA7A6NL88 538 aa12.89□□□□□ -0.35
SDCBP-211ENST00000523441 PRRG1O14668 218 aa12.89□□□□□ -0.35
SDCBP-211ENST00000523441 AXIN1O15169 862 aa12.89□□□□□ -0.35
SDCBP-211ENST00000523441 HRO43593 1189 aa12.89□□□□□ -0.35
SDCBP-211ENST00000523441 CCNT1O60563 726 aaKnown RBP12.89□□□□□ -0.35
SDCBP-211ENST00000523441 ECI2O75521 394 aa12.89□□□□□ -0.35
SDCBP-211ENST00000523441 PAPLNO95428 1278 aa12.89□□□□□ -0.35
SDCBP-211ENST00000523441 LRG1P02750 347 aa12.89□□□□□ -0.35
SDCBP-211ENST00000523441 CYP3A7P24462 503 aa12.89□□□□□ -0.35
SDCBP-211ENST00000523441 CCNE1P24864 410 aa12.89□□□□□ -0.35
SDCBP-211ENST00000523441 RCAN1P53805 252 aa12.89□□□□□ -0.35
SDCBP-211ENST00000523441 SSRP1Q08945 709 aaKnown RBP12.89□□□□□ -0.35
SDCBP-211ENST00000523441 MXD4Q14582 209 aaPredicted RBP12.89□□□□□ -0.35
SDCBP-211ENST00000523441 NTRK3Q16288 839 aa12.89□□□□□ -0.35
SDCBP-211ENST00000523441 AMHR2Q16671 573 aa12.89□□□□□ -0.35
SDCBP-211ENST00000523441 FAM78AQ5JUQ0 283 aa12.89□□□□□ -0.35
SDCBP-211ENST00000523441 GLRA4Q5JXX5 417 aa12.89□□□□□ -0.35
SDCBP-211ENST00000523441 BLOC1S2Q6QNY1 142 aa12.89□□□□□ -0.35
SDCBP-211ENST00000523441 NOSTRINQ8IVI9 506 aa12.89□□□□□ -0.35
SDCBP-211ENST00000523441 CELF5Q8N6W0 485 aaKnown RBP12.89□□□□□ -0.35
SDCBP-211ENST00000523441 TRMT61BQ9BVS5 477 aaKnown RBP12.89□□□□□ -0.35
SDCBP-211ENST00000523441 FAM126AQ9BYI3 521 aaPredicted RBP12.89□□□□□ -0.35
SDCBP-211ENST00000523441 C22orf23Q9BZE7 217 aa12.89□□□□□ -0.35
SDCBP-211ENST00000523441 POLR3FQ9H1D9 316 aaPredicted RBP12.89□□□□□ -0.35
SDCBP-211ENST00000523441 CHRDQ9H2X0 955 aa12.89□□□□□ -0.35
SDCBP-211ENST00000523441 KCNJ14Q9UNX9 436 aa12.89□□□□□ -0.35
SDCBP-211ENST00000523441 KIF26AQ9ULI4 1882 aaPredicted RBP12.89□□□□□ -0.35
SDCBP-211ENST00000523441 COL4A2P08572 1712 aa12.88□□□□□ -0.35
SDCBP-211ENST00000523441 SDK1Q7Z5N4 2213 aa12.88□□□□□ -0.35
SDCBP-211ENST00000523441 MAN2B1O00754 1011 aa12.88□□□□□ -0.35
SDCBP-211ENST00000523441 C1RP00736 705 aa12.88□□□□□ -0.35
SDCBP-211ENST00000523441 THP07101 528 aa12.88□□□□□ -0.35
SDCBP-211ENST00000523441 HMGB1P09429 215 aaKnown RBP12.88□□□□□ -0.35
SDCBP-211ENST00000523441 TDGF1P13385 188 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms