RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 USO1O60763 962 aaKnown RBP25.16■■□□□ 1.62
PVT1-218ENST00000523328 PFKFB2O60825 505 aa25.16■■□□□ 1.62
PVT1-218ENST00000523328 PUM1Q14671 1186 aaKnown RBP eCLIP25.16■■□□□ 1.62
PVT1-218ENST00000523328 MLF2Q15773 248 aaPredicted RBP25.16■■□□□ 1.62
PVT1-218ENST00000523328 CALCRLQ16602 461 aa25.16■■□□□ 1.62
PVT1-218ENST00000523328 FAM187BQ17R55 369 aa25.16■■□□□ 1.62
PVT1-218ENST00000523328 CDCA2Q69YH5 1023 aaPredicted RBP25.16■■□□□ 1.62
PVT1-218ENST00000523328 ITFG1Q8TB96 612 aa25.16■■□□□ 1.62
PVT1-218ENST00000523328 FZD8Q9H461 694 aa25.16■■□□□ 1.62
PVT1-218ENST00000523328 PRMT7Q9NVM4 692 aaPredicted RBP25.16■■□□□ 1.62
PVT1-218ENST00000523328 TPCN1Q9ULQ1 816 aa25.16■■□□□ 1.62
PVT1-218ENST00000523328 NCOR2Q9Y618 2525 aa25.16■■□□□ 1.62
PVT1-218ENST00000523328 WNT7AO00755 349 aa25.15■■□□□ 1.62
PVT1-218ENST00000523328 KRT2P35908 639 aa25.15■■□□□ 1.62
PVT1-218ENST00000523328 PRKCQQ04759 706 aa25.15■■□□□ 1.62
PVT1-218ENST00000523328 SLC44A4Q53GD3 710 aa25.15■■□□□ 1.62
PVT1-218ENST00000523328 PDZD7Q9H5P4 517 aa25.15■■□□□ 1.62
PVT1-218ENST00000523328 SNTG2Q9NY99 539 aa25.15■■□□□ 1.62
PVT1-218ENST00000523328 DLL3Q9NYJ7 618 aa25.15■■□□□ 1.62
PVT1-218ENST00000523328 ORC3Q9UBD5 711 aaPredicted RBP25.15■■□□□ 1.62
PVT1-218ENST00000523328 POLIQ9UNA4 740 aa25.15■■□□□ 1.62
PVT1-218ENST00000523328 MTF2Q9Y483 593 aaPredicted RBP25.15■■□□□ 1.62
PVT1-218ENST00000523328 XYLBO75191 536 aa25.14■■□□□ 1.62
PVT1-218ENST00000523328 RECQL4O94761 1208 aa25.14■■□□□ 1.62
PVT1-218ENST00000523328 THP07101 528 aa25.14■■□□□ 1.62
PVT1-218ENST00000523328 POU2F2P09086 479 aa25.14■■□□□ 1.62
PVT1-218ENST00000523328 XRCC6P12956 609 aaKnown RBP eCLIP25.14■■□□□ 1.622e-7■■■■□ 23.7
PVT1-218ENST00000523328 FDPSP14324 419 aaKnown RBP25.14■■□□□ 1.62
PVT1-218ENST00000523328 ZNF528Q3MIS6 628 aa25.14■■□□□ 1.62
PVT1-218ENST00000523328 MAEAQ7L5Y9 396 aa25.14■■□□□ 1.62
PVT1-218ENST00000523328 SLC7A14Q8TBB6 771 aa25.14■■□□□ 1.62
PVT1-218ENST00000523328 OSBPL6Q9BZF3 934 aa25.14■■□□□ 1.62
PVT1-218ENST00000523328 KINO60870 393 aaKnown RBP25.13■■□□□ 1.61
PVT1-218ENST00000523328 TXKP42681 527 aa25.13■■□□□ 1.61
PVT1-218ENST00000523328 ELAVL2Q12926 359 aaKnown RBP25.13■■□□□ 1.61
PVT1-218ENST00000523328 RAB33AQ14088 237 aa25.13■■□□□ 1.61
PVT1-218ENST00000523328 AXDND1Q5T1B0 1012 aaPredicted RBP25.13■■□□□ 1.61
PVT1-218ENST00000523328 MTMR9Q96QG7 549 aa25.13■■□□□ 1.61
PVT1-218ENST00000523328 BCO2Q9BYV7 579 aa25.13■■□□□ 1.61
PVT1-218ENST00000523328 SPATA6Q9NWH7 488 aaPredicted RBP25.13■■□□□ 1.61
PVT1-218ENST00000523328 HCFC1R1Q9NWW0 138 aa25.13■■□□□ 1.61
PVT1-218ENST00000523328 FBXO4Q9UKT5 387 aa25.13■■□□□ 1.61
PVT1-218ENST00000523328 N4BP3O15049 544 aa25.12■■□□□ 1.61
PVT1-218ENST00000523328 NEMFO60524 1076 aa25.12■■□□□ 1.61
PVT1-218ENST00000523328 SPATA31C1P0DKV0 1188 aa25.12■■□□□ 1.61
PVT1-218ENST00000523328 UVSSAQ2YD98 709 aa25.12■■□□□ 1.61
PVT1-218ENST00000523328 PDXDC1Q6P996 788 aa25.12■■□□□ 1.61
PVT1-218ENST00000523328 ZBTB8OSQ8IWT0 167 aa25.12■■□□□ 1.61
PVT1-218ENST00000523328 NPAS3Q8IXF0 933 aa25.12■■□□□ 1.61
PVT1-218ENST00000523328 WASF1Q92558 559 aa25.12■■□□□ 1.61
PVT1-218ENST00000523328 KXD1Q9BQD3 176 aa25.12■■□□□ 1.61
PVT1-218ENST00000523328 LTB4R2Q9NPC1 389 aa25.12■■□□□ 1.61
PVT1-218ENST00000523328 DNMT3BQ9UBC3 853 aaKnown RBP25.12■■□□□ 1.61
PVT1-218ENST00000523328 LAMTOR5O43504 91 aa25.11■■□□□ 1.61
PVT1-218ENST00000523328 EDN1P05305 212 aa25.11■■□□□ 1.61
PVT1-218ENST00000523328 IGFBP6P24592 240 aaPredicted RBP25.11■■□□□ 1.61
PVT1-218ENST00000523328 OR1D2P34982 312 aa25.11■■□□□ 1.61
PVT1-218ENST00000523328 PFKPQ01813 784 aa25.11■■□□□ 1.61
PVT1-218ENST00000523328 UBXN2BQ14CS0 331 aa25.11■■□□□ 1.61
PVT1-218ENST00000523328 RSPO2Q6UXX9 243 aaPredicted RBP25.11■■□□□ 1.61
PVT1-218ENST00000523328 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.11■■□□□ 1.61
PVT1-218ENST00000523328 NOSTRINQ8IVI9 506 aa25.11■■□□□ 1.61
PVT1-218ENST00000523328 MCPH1Q8NEM0 835 aa25.11■■□□□ 1.61
PVT1-218ENST00000523328 BSNDQ8WZ55 320 aa25.11■■□□□ 1.61
PVT1-218ENST00000523328 BRMS1Q9HCU9 246 aa25.11■■□□□ 1.61
PVT1-218ENST00000523328 KCNH3Q9ULD8 1083 aa25.11■■□□□ 1.61
PVT1-218ENST00000523328 FAM170BA6NMN3 283 aa25.1■■□□□ 1.61
PVT1-218ENST00000523328 CD72P21854 359 aa25.1■■□□□ 1.61
PVT1-218ENST00000523328 FGFR3P22607 806 aa25.1■■□□□ 1.61
PVT1-218ENST00000523328 PRPF4BQ13523 1007 aaKnown RBP25.1■■□□□ 1.61
PVT1-218ENST00000523328 PABPC1LQ4VXU2 614 aaKnown RBP25.1■■□□□ 1.61
PVT1-218ENST00000523328 BORCS6Q96GS4 357 aa25.1■■□□□ 1.61
PVT1-218ENST00000523328 CCDC113Q9H0I3 377 aa25.1■■□□□ 1.61
PVT1-218ENST00000523328 MTRRQ9UBK8 725 aa25.1■■□□□ 1.61
PVT1-218ENST00000523328 USP20Q9Y2K6 914 aa25.1■■□□□ 1.61
PVT1-218ENST00000523328 BTBD18B2RXH4 712 aa25.09■■□□□ 1.61
PVT1-218ENST00000523328 TMEM189-UBE2V1I3L0A0 370 aa25.09■■□□□ 1.61
PVT1-218ENST00000523328 SPTLC1O15269 473 aa25.09■■□□□ 1.61
PVT1-218ENST00000523328 ATP2B1P20020 1258 aa25.09■■□□□ 1.61
PVT1-218ENST00000523328 EEF1DP3Q658K8 133 aa25.09■■□□□ 1.61
PVT1-218ENST00000523328 RTL10Q7L3V2 364 aa25.09■■□□□ 1.61
PVT1-218ENST00000523328 CATSPER3Q86XQ3 398 aa25.09■■□□□ 1.61
PVT1-218ENST00000523328 C2orf40Q9H1Z8 148 aa25.09■■□□□ 1.61
PVT1-218ENST00000523328 ACKR2O00590 384 aa25.08■■□□□ 1.61
PVT1-218ENST00000523328 MED24O75448 989 aa25.08■■□□□ 1.61
PVT1-218ENST00000523328 PRKCBP05771 671 aa25.08■■□□□ 1.61
PVT1-218ENST00000523328 MAGEA9P43362 315 aa25.08■■□□□ 1.61
PVT1-218ENST00000523328 CSTF1Q05048 431 aaKnown RBP25.08■■□□□ 1.61
PVT1-218ENST00000523328 MAPK6Q16659 721 aa25.08■■□□□ 1.61
PVT1-218ENST00000523328 VARS2Q5ST30 1063 aaKnown RBP25.08■■□□□ 1.61
PVT1-218ENST00000523328 POTEHQ6S545 545 aa25.08■■□□□ 1.61
PVT1-218ENST00000523328 CD300LGQ6UXG3 332 aa25.08■■□□□ 1.61
PVT1-218ENST00000523328 ING5Q8WYH8 240 aa25.08■■□□□ 1.61
PVT1-218ENST00000523328 ADPGKQ9BRR6 497 aa25.08■■□□□ 1.61
PVT1-218ENST00000523328 TMEM60Q9H2L4 133 aa25.08■■□□□ 1.61
PVT1-218ENST00000523328 TUFT1Q9NNX1 390 aa25.08■■□□□ 1.61
PVT1-218ENST00000523328 PCDHGA2Q9Y5H1 932 aa25.08■■□□□ 1.61
PVT1-218ENST00000523328 CDY1Q9Y6F8 540 aa25.08■■□□□ 1.61
PVT1-218ENST00000523328 TARSP26639 723 aaKnown RBP25.07■■□□□ 1.6
PVT1-218ENST00000523328 RBM25P49756 843 aaKnown RBP25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms