RNA–Protein interactions for RNA: ENST00000523139.5

BRD9-219, Transcript of bromodomain containing 9, humanhuman

TSL 3

Gene BRD9, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-219ENST00000523139 FAM163BP0C2L3 166 aa6.85□□□□□ -1.31
BRD9-219ENST00000523139 STAG3L1P0CL83 205 aa6.85□□□□□ -1.31
BRD9-219ENST00000523139 RAG1P15918 1043 aa6.85□□□□□ -1.31
BRD9-219ENST00000523139 RFX1P22670 979 aa6.85□□□□□ -1.31
BRD9-219ENST00000523139 PBX1P40424 430 aa6.85□□□□□ -1.31
BRD9-219ENST00000523139 CASP4P49662 377 aa6.85□□□□□ -1.31
BRD9-219ENST00000523139 RGS19P49795 217 aa6.85□□□□□ -1.31
BRD9-219ENST00000523139 VAMP7P51809 220 aa6.85□□□□□ -1.31
BRD9-219ENST00000523139 COPB1P53618 953 aaKnown RBP6.85□□□□□ -1.31
BRD9-219ENST00000523139 YARSP54577 528 aaKnown RBP6.85□□□□□ -1.31
BRD9-219ENST00000523139 FANCCQ00597 558 aa6.85□□□□□ -1.31
BRD9-219ENST00000523139 CETN1Q12798 172 aa6.85□□□□□ -1.31
BRD9-219ENST00000523139 PPIGQ13427 754 aaKnown RBP eCLIP6.85□□□□□ -1.312e-6■■■□□ 16.2
BRD9-219ENST00000523139 IKBKEQ14164 716 aa6.85□□□□□ -1.31
BRD9-219ENST00000523139 ENOX2Q16206 610 aaKnown RBP6.85□□□□□ -1.31
BRD9-219ENST00000523139 SLC10A6Q3KNW5 377 aa6.85□□□□□ -1.31
BRD9-219ENST00000523139 ZACNQ401N2 412 aa6.85□□□□□ -1.31
BRD9-219ENST00000523139 CCDC40Q4G0X9 1142 aa6.85□□□□□ -1.31
BRD9-219ENST00000523139 VWA3BQ502W6 1294 aa6.85□□□□□ -1.31
BRD9-219ENST00000523139 C1orf220Q5T0J3 134 aa6.85□□□□□ -1.31
BRD9-219ENST00000523139 CEP135Q66GS9 1140 aa6.85□□□□□ -1.31
BRD9-219ENST00000523139 KRT39Q6A163 491 aa6.85□□□□□ -1.31
BRD9-219ENST00000523139 TWF2Q6IBS0 349 aaKnown RBP6.85□□□□□ -1.31
BRD9-219ENST00000523139 ECHDC2Q86YB7 292 aa6.85□□□□□ -1.31
BRD9-219ENST00000523139 CBWD2Q8IUF1 395 aa6.85□□□□□ -1.31
BRD9-219ENST00000523139 SMG8Q8ND04 991 aaKnown RBP6.85□□□□□ -1.31
BRD9-219ENST00000523139 DBF4BQ8NFT6 615 aa6.85□□□□□ -1.31
BRD9-219ENST00000523139 PPP1R13LQ8WUF5 828 aa6.85□□□□□ -1.31
BRD9-219ENST00000523139 CACTINQ8WUQ7 758 aaKnown RBP6.85□□□□□ -1.31
BRD9-219ENST00000523139 TAF4BQ92750 862 aa6.85□□□□□ -1.31
BRD9-219ENST00000523139 JAKMIP2Q96AA8 810 aa6.85□□□□□ -1.31
BRD9-219ENST00000523139 TRIM43Q96BQ3 446 aaPredicted RBP6.85□□□□□ -1.31
BRD9-219ENST00000523139 VWCEQ96DN2 955 aa6.85□□□□□ -1.31
BRD9-219ENST00000523139 ZBTB45Q96K62 511 aaPredicted RBP6.85□□□□□ -1.31
BRD9-219ENST00000523139 SNX27Q96L92 541 aa6.85□□□□□ -1.31
BRD9-219ENST00000523139 CGRRF1Q99675 332 aa6.85□□□□□ -1.31
BRD9-219ENST00000523139 ADAM2Q99965 735 aa6.85□□□□□ -1.31
BRD9-219ENST00000523139 TRIM6Q9C030 488 aaPredicted RBP6.85□□□□□ -1.31
BRD9-219ENST00000523139 RPF1Q9H9Y2 349 aaKnown RBP6.85□□□□□ -1.31
BRD9-219ENST00000523139 TMEM8AQ9HCN3 771 aa6.85□□□□□ -1.31
BRD9-219ENST00000523139 IL23AQ9NPF7 189 aa6.85□□□□□ -1.31
BRD9-219ENST00000523139 PLCB1Q9NQ66 1216 aa6.85□□□□□ -1.31
BRD9-219ENST00000523139 SLC38A7Q9NVC3 462 aa6.85□□□□□ -1.31
BRD9-219ENST00000523139 INTS13Q9NVM9 706 aa6.85□□□□□ -1.31
BRD9-219ENST00000523139 RBAKQ9NYW8 714 aaPredicted RBP6.85□□□□□ -1.31
BRD9-219ENST00000523139 KANSL3Q9P2N6 904 aa6.85□□□□□ -1.31
BRD9-219ENST00000523139 ANKFY1Q9P2R3 1169 aa6.85□□□□□ -1.31
BRD9-219ENST00000523139 PRKAG2Q9UGJ0 569 aa6.85□□□□□ -1.31
BRD9-219ENST00000523139 GINS2Q9Y248 185 aa6.85□□□□□ -1.31
BRD9-219ENST00000523139 IPPQ9Y573 584 aa6.85□□□□□ -1.31
BRD9-219ENST00000523139 PCDHB2Q9Y5E7 798 aa6.85□□□□□ -1.31
BRD9-219ENST00000523139 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.85□□□□□ -1.31
BRD9-219ENST00000523139 SCN5AQ14524 2016 aa6.84□□□□□ -1.31
BRD9-219ENST00000523139 UMODL1Q5DID0 1318 aa6.84□□□□□ -1.31
BRD9-219ENST00000523139 DNAH12Q6ZR08 3092 aa6.84□□□□□ -1.31
BRD9-219ENST00000523139 LRRIQ3A6PVS8 624 aaPredicted RBP6.84□□□□□ -1.31
BRD9-219ENST00000523139 ENPP3O14638 875 aa6.84□□□□□ -1.31
BRD9-219ENST00000523139 CSDE1O75534 798 aaKnown RBP6.84□□□□□ -1.31
BRD9-219ENST00000523139 C4BPAP04003 597 aaKnown RBP6.84□□□□□ -1.31
BRD9-219ENST00000523139 ACTN1P12814 892 aa6.84□□□□□ -1.31
BRD9-219ENST00000523139 ATP1A3P13637 1013 aa6.84□□□□□ -1.31
BRD9-219ENST00000523139 ATF7P17544 494 aaPredicted RBP6.84□□□□□ -1.31
BRD9-219ENST00000523139 ATICP31939 592 aa6.84□□□□□ -1.31
BRD9-219ENST00000523139 MTIF2P46199 727 aaKnown RBP6.84□□□□□ -1.31
BRD9-219ENST00000523139 FMO5P49326 533 aa6.84□□□□□ -1.31
BRD9-219ENST00000523139 CYP2J2P51589 502 aa6.84□□□□□ -1.31
BRD9-219ENST00000523139 UBASH3AP57075 661 aa6.84□□□□□ -1.31
BRD9-219ENST00000523139 KCNH2Q12809 1159 aa6.84□□□□□ -1.31
BRD9-219ENST00000523139 NFX1Q12986 1120 aaKnown RBP6.84□□□□□ -1.31
BRD9-219ENST00000523139 ARID5BQ14865 1188 aa6.84□□□□□ -1.31
BRD9-219ENST00000523139 DUOXA2Q1HG44 320 aa6.84□□□□□ -1.31
BRD9-219ENST00000523139 FKBP15Q5T1M5 1219 aa6.84□□□□□ -1.31
BRD9-219ENST00000523139 PSRC1Q6PGN9 363 aaPredicted RBP6.84□□□□□ -1.31
BRD9-219ENST00000523139 RTN4RL1Q86UN2 441 aaPredicted RBP6.84□□□□□ -1.31
BRD9-219ENST00000523139 NPAS4Q8IUM7 802 aa6.84□□□□□ -1.31
BRD9-219ENST00000523139 FMNL3Q8IVF7 1028 aa6.84□□□□□ -1.31
BRD9-219ENST00000523139 RNF214Q8ND24 703 aa6.84□□□□□ -1.31
BRD9-219ENST00000523139 FBXL13Q8NEE6 735 aa6.84□□□□□ -1.31
BRD9-219ENST00000523139 TET1Q8NFU7 2136 aa6.84□□□□□ -1.31
BRD9-219ENST00000523139 CXorf38Q8TB03 319 aa6.84□□□□□ -1.31
BRD9-219ENST00000523139 SPATA18Q8TC71 538 aa6.84□□□□□ -1.31
BRD9-219ENST00000523139 PHOSPHO2Q8TCD6 241 aa6.84□□□□□ -1.31
BRD9-219ENST00000523139 CPB2Q96IY4 423 aa6.84□□□□□ -1.31
BRD9-219ENST00000523139 PDLIM2Q96JY6 352 aa6.84□□□□□ -1.31
BRD9-219ENST00000523139 UROC1Q96N76 676 aa6.84□□□□□ -1.31
BRD9-219ENST00000523139 FNBP1Q96RU3 617 aa6.84□□□□□ -1.31
BRD9-219ENST00000523139 FAM213AQ9BRX8 229 aa6.84□□□□□ -1.31
BRD9-219ENST00000523139 NUP58Q9BVL2 599 aa6.84□□□□□ -1.31
BRD9-219ENST00000523139 EIF2AQ9BY44 585 aaKnown RBP6.84□□□□□ -1.31
BRD9-219ENST00000523139 IKZF4Q9H2S9 585 aa6.84□□□□□ -1.31
BRD9-219ENST00000523139 PCIF1Q9H4Z3 704 aa6.84□□□□□ -1.31
BRD9-219ENST00000523139 ITGA11Q9UKX5 1188 aa6.84□□□□□ -1.31
BRD9-219ENST00000523139 MYO6Q9UM54 1294 aa6.84□□□□□ -1.31
BRD9-219ENST00000523139 NR2E3Q9Y5X4 410 aa6.84□□□□□ -1.31
BRD9-219ENST00000523139 TDRD15B5MCY1 1934 aaKnown RBP6.84□□□□□ -1.32
BRD9-219ENST00000523139 TRIP11Q15643 1979 aa6.83□□□□□ -1.32
BRD9-219ENST00000523139 SMIM28A0A1B0GU29 152 aa6.83□□□□□ -1.32
BRD9-219ENST00000523139 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.83□□□□□ -1.32
BRD9-219ENST00000523139 A0A1W2PQJ5 194 aa6.83□□□□□ -1.32
BRD9-219ENST00000523139 ANO9A1A5B4 782 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms