RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 KCND2Q9NZV8 630 aa13.59□□□□□ -0.23
VEGFA-223ENST00000523125 FNIP2Q9P278 1114 aa13.59□□□□□ -0.23
VEGFA-223ENST00000523125 HCN4Q9Y3Q4 1203 aa13.59□□□□□ -0.23
VEGFA-223ENST00000523125 SF3B1O75533 1304 aaKnown RBP eCLIP13.59□□□□□ -0.236e-7■■■■■ 31.1
VEGFA-223ENST00000523125 ANK1P16157 1881 aa13.59□□□□□ -0.23
VEGFA-223ENST00000523125 NOTCH4Q99466 2003 aa13.58□□□□□ -0.24
VEGFA-223ENST00000523125 SMIM28A0A1B0GU29 152 aa13.58□□□□□ -0.24
VEGFA-223ENST00000523125 VPS37CA5D8V6 355 aaPredicted RBP13.58□□□□□ -0.24
VEGFA-223ENST00000523125 MEFVO15553 781 aaPredicted RBP13.58□□□□□ -0.24
VEGFA-223ENST00000523125 BMP15O95972 392 aa13.58□□□□□ -0.24
VEGFA-223ENST00000523125 C1RP00736 705 aa13.58□□□□□ -0.24
VEGFA-223ENST00000523125 SPATA31D3P0C874 917 aa13.58□□□□□ -0.24
VEGFA-223ENST00000523125 MAPTP10636 758 aaKnown RBP13.58□□□□□ -0.24
VEGFA-223ENST00000523125 RPL17P18621 184 aaKnown RBP13.58□□□□□ -0.24
VEGFA-223ENST00000523125 SYT1P21579 422 aa13.58□□□□□ -0.24
VEGFA-223ENST00000523125 PTPAQ15257 358 aa13.58□□□□□ -0.24
VEGFA-223ENST00000523125 ZNF568Q3ZCX4 644 aa13.58□□□□□ -0.24
VEGFA-223ENST00000523125 FAM171A1Q5VUB5 890 aa13.58□□□□□ -0.24
VEGFA-223ENST00000523125 C15orf39Q6ZRI6 1047 aa13.58□□□□□ -0.24
VEGFA-223ENST00000523125 SPATA31D4Q6ZUB0 917 aa13.58□□□□□ -0.24
VEGFA-223ENST00000523125 BMP8AQ7Z5Y6 402 aa13.58□□□□□ -0.24
VEGFA-223ENST00000523125 ZBTB33Q86T24 672 aa13.58□□□□□ -0.24
VEGFA-223ENST00000523125 PALB2Q86YC2 1186 aa13.58□□□□□ -0.24
VEGFA-223ENST00000523125 CMASQ8NFW8 434 aaPredicted RBP13.58□□□□□ -0.24
VEGFA-223ENST00000523125 ZBTB45Q96K62 511 aaPredicted RBP13.58□□□□□ -0.24
VEGFA-223ENST00000523125 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.58□□□□□ -0.24
VEGFA-223ENST00000523125 CLIC4Q9Y696 253 aa13.58□□□□□ -0.24
VEGFA-223ENST00000523125 CCDC195A0A1B0GUA6 201 aa13.57□□□□□ -0.24
VEGFA-223ENST00000523125 TMEM221A6NGB7 291 aa13.57□□□□□ -0.24
VEGFA-223ENST00000523125 TMEM189-UBE2V1I3L0A0 370 aa13.57□□□□□ -0.24
VEGFA-223ENST00000523125 M0R296 226 aa13.57□□□□□ -0.24
VEGFA-223ENST00000523125 TGM5O43548 720 aa13.57□□□□□ -0.24
VEGFA-223ENST00000523125 RFPL2O75678 378 aa13.57□□□□□ -0.24
VEGFA-223ENST00000523125 GLUD1P00367 558 aa13.57□□□□□ -0.24
VEGFA-223ENST00000523125 MYBP10242 640 aa13.57□□□□□ -0.24
VEGFA-223ENST00000523125 MCF2P10911 925 aa13.57□□□□□ -0.24
VEGFA-223ENST00000523125 PLCG1P19174 1290 aa13.57□□□□□ -0.24
VEGFA-223ENST00000523125 PDCP20941 246 aa13.57□□□□□ -0.24
VEGFA-223ENST00000523125 LONP1P36776 959 aaKnown RBP13.57□□□□□ -0.24
VEGFA-223ENST00000523125 PLA2G5P39877 138 aa13.57□□□□□ -0.24
VEGFA-223ENST00000523125 UBA7P41226 1012 aa13.57□□□□□ -0.24
VEGFA-223ENST00000523125 CLCNKBP51801 687 aa13.57□□□□□ -0.24
VEGFA-223ENST00000523125 OSTNP61366 133 aa13.57□□□□□ -0.24
VEGFA-223ENST00000523125 CACNB1Q02641 598 aaPredicted RBP13.57□□□□□ -0.24
VEGFA-223ENST00000523125 SOX4Q06945 474 aaPredicted RBP13.57□□□□□ -0.24
VEGFA-223ENST00000523125 RESTQ13127 1097 aa13.57□□□□□ -0.24
VEGFA-223ENST00000523125 KARSQ15046 597 aaKnown RBP13.57□□□□□ -0.24
VEGFA-223ENST00000523125 UPP1Q16831 310 aa13.57□□□□□ -0.24
VEGFA-223ENST00000523125 MPZL3Q6UWV2 235 aa13.57□□□□□ -0.24
VEGFA-223ENST00000523125 USP49Q70CQ1 688 aa13.57□□□□□ -0.24
VEGFA-223ENST00000523125 APBB1IPQ7Z5R6 666 aaPredicted RBP13.57□□□□□ -0.24
VEGFA-223ENST00000523125 GLYCTKQ8IVS8 523 aa13.57□□□□□ -0.24
VEGFA-223ENST00000523125 ZDHHC14Q8IZN3 488 aa13.57□□□□□ -0.24
VEGFA-223ENST00000523125 C3orf58Q8NDZ4 430 aa13.57□□□□□ -0.24
VEGFA-223ENST00000523125 LNX1Q8TBB1 728 aaPredicted RBP13.57□□□□□ -0.24
VEGFA-223ENST00000523125 HDAC7Q8WUI4 952 aa13.57□□□□□ -0.24
VEGFA-223ENST00000523125 PIK3R5Q8WYR1 880 aa13.57□□□□□ -0.24
VEGFA-223ENST00000523125 KCNN1Q92952 543 aa13.57□□□□□ -0.24
VEGFA-223ENST00000523125 ZNF707Q96C28 371 aaPredicted RBP13.57□□□□□ -0.24
VEGFA-223ENST00000523125 ASIC4Q96FT7 647 aa13.57□□□□□ -0.24
VEGFA-223ENST00000523125 INTS4Q96HW7 963 aaKnown RBP13.57□□□□□ -0.24
VEGFA-223ENST00000523125 ZMAT2Q96NC0 199 aaKnown RBP13.57□□□□□ -0.24
VEGFA-223ENST00000523125 CLSTN3Q9BQT9 956 aa13.57□□□□□ -0.24
VEGFA-223ENST00000523125 REEP2Q9BRK0 252 aa13.57□□□□□ -0.24
VEGFA-223ENST00000523125 TTPALQ9BTX7 342 aa13.57□□□□□ -0.24
VEGFA-223ENST00000523125 RHOBTB2Q9BYZ6 727 aa13.57□□□□□ -0.24
VEGFA-223ENST00000523125 HAPLN2Q9GZV7 340 aa13.57□□□□□ -0.24
VEGFA-223ENST00000523125 GOLGA2P5Q9HBQ8 144 aa13.57□□□□□ -0.24
VEGFA-223ENST00000523125 USTQ9Y2C2 406 aa13.57□□□□□ -0.24
VEGFA-223ENST00000523125 MUC6Q6W4X9 2439 aa13.56□□□□□ -0.24
VEGFA-223ENST00000523125 TOM1L1O75674 476 aa13.56□□□□□ -0.24
VEGFA-223ENST00000523125 KCNE1P15382 129 aa13.56□□□□□ -0.24
VEGFA-223ENST00000523125 SMTNP53814 917 aa13.56□□□□□ -0.24
VEGFA-223ENST00000523125 NCKAP1LP55160 1127 aa13.56□□□□□ -0.24
VEGFA-223ENST00000523125 SIGLEC14Q08ET2 396 aa13.56□□□□□ -0.24
VEGFA-223ENST00000523125 MCM6Q14566 821 aa13.56□□□□□ -0.24
VEGFA-223ENST00000523125 FAM173BQ6P4H8 233 aa13.56□□□□□ -0.24
VEGFA-223ENST00000523125 DCLRE1AQ6PJP8 1040 aa13.56□□□□□ -0.24
VEGFA-223ENST00000523125 GPBP1Q86WP2 473 aa13.56□□□□□ -0.24
VEGFA-223ENST00000523125 TDRD5Q8NAT2 981 aaKnown RBP13.56□□□□□ -0.24
VEGFA-223ENST00000523125 KREMEN2Q8NCW0 462 aa13.56□□□□□ -0.24
VEGFA-223ENST00000523125 CALML4Q96GE6 196 aa13.56□□□□□ -0.24
VEGFA-223ENST00000523125 EPSTI1Q96J88 318 aa13.56□□□□□ -0.24
VEGFA-223ENST00000523125 SNX27Q96L92 541 aa13.56□□□□□ -0.24
VEGFA-223ENST00000523125 TCHPQ9BT92 498 aa13.56□□□□□ -0.24
VEGFA-223ENST00000523125 CCDC94Q9BW85 323 aaPredicted RBP13.56□□□□□ -0.24
VEGFA-223ENST00000523125 CCSER1Q9C0I3 900 aa13.56□□□□□ -0.24
VEGFA-223ENST00000523125 PLEKHA4Q9H4M7 779 aa13.56□□□□□ -0.24
VEGFA-223ENST00000523125 LIMD1Q9UGP4 676 aa13.56□□□□□ -0.24
VEGFA-223ENST00000523125 KCNG1Q9UIX4 513 aa13.56□□□□□ -0.24
VEGFA-223ENST00000523125 ODF2LQ9ULJ1 636 aa13.56□□□□□ -0.24
VEGFA-223ENST00000523125 SPDYE4A6NLX3 237 aa13.55□□□□□ -0.24
VEGFA-223ENST00000523125 ADAM12O43184 909 aa13.55□□□□□ -0.24
VEGFA-223ENST00000523125 N4BP1O75113 896 aaKnown RBP13.55□□□□□ -0.24
VEGFA-223ENST00000523125 B3GAT3O94766 335 aa13.55□□□□□ -0.24
VEGFA-223ENST00000523125 ASGR2P07307 311 aa13.55□□□□□ -0.24
VEGFA-223ENST00000523125 FGFR3P22607 806 aa13.55□□□□□ -0.24
VEGFA-223ENST00000523125 ZNF131P52739 623 aa13.55□□□□□ -0.24
VEGFA-223ENST00000523125 YARSP54577 528 aaKnown RBP13.55□□□□□ -0.24
VEGFA-223ENST00000523125 CREMQ03060 361 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms