RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 ADPGKQ9BRR6 497 aa17.01■□□□□ 0.31
MRPS28-209ENST00000522987 BHMT2Q9H2M3 363 aa17.01■□□□□ 0.31
MRPS28-209ENST00000522987 TBC1D17Q9HA65 648 aa17.01■□□□□ 0.31
MRPS28-209ENST00000522987 EPS15L1Q9UBC2 864 aa17.01■□□□□ 0.31
MRPS28-209ENST00000522987 NUMBLQ9Y6R0 609 aa17.01■□□□□ 0.31
MRPS28-209ENST00000522987 ACKR2O00590 384 aa17■□□□□ 0.31
MRPS28-209ENST00000522987 C8AP07357 584 aa17■□□□□ 0.31
MRPS28-209ENST00000522987 DCNP07585 359 aaKnown RBP17■□□□□ 0.31
MRPS28-209ENST00000522987 FSHRP23945 695 aa17■□□□□ 0.31
MRPS28-209ENST00000522987 NBL1P41271 181 aa17■□□□□ 0.31
MRPS28-209ENST00000522987 OSTNP61366 133 aa17■□□□□ 0.31
MRPS28-209ENST00000522987 NAB2Q15742 525 aa17■□□□□ 0.31
MRPS28-209ENST00000522987 PPM1LQ5SGD2 360 aa17■□□□□ 0.31
MRPS28-209ENST00000522987 LIN9Q5TKA1 542 aa17■□□□□ 0.31
MRPS28-209ENST00000522987 CEP120Q8N960 986 aa17■□□□□ 0.31
MRPS28-209ENST00000522987 HDAC7Q8WUI4 952 aa17■□□□□ 0.31
MRPS28-209ENST00000522987 DDX19AQ9NUU7 478 aaKnown RBP17■□□□□ 0.31
MRPS28-209ENST00000522987 HCFC1R1Q9NWW0 138 aa17■□□□□ 0.31
MRPS28-209ENST00000522987 ZDHHC7Q9NXF8 308 aa17■□□□□ 0.31
MRPS28-209ENST00000522987 FBXW11Q9UKB1 542 aa17■□□□□ 0.31
MRPS28-209ENST00000522987 LIMCH1Q9UPQ0 1083 aa17■□□□□ 0.31
MRPS28-209ENST00000522987 KIAA1024Q9UPX6 916 aa17■□□□□ 0.31
MRPS28-209ENST00000522987 CACNA1IQ9P0X4 2223 aa17■□□□□ 0.31
MRPS28-209ENST00000522987 VPS13AQ96RL7 3174 aa16.99■□□□□ 0.31
MRPS28-209ENST00000522987 SPTBN4Q9H254 2564 aa16.99■□□□□ 0.31
MRPS28-209ENST00000522987 ANK1P16157 1881 aa16.99■□□□□ 0.31
MRPS28-209ENST00000522987 PP2D1A8MPX8 630 aa16.99■□□□□ 0.31
MRPS28-209ENST00000522987 PROB1E7EW31 1015 aa16.99■□□□□ 0.31
MRPS28-209ENST00000522987 SRFP11831 508 aa16.99■□□□□ 0.31
MRPS28-209ENST00000522987 OR1D2P34982 312 aa16.99■□□□□ 0.31
MRPS28-209ENST00000522987 BRCC3P46736 316 aa16.99■□□□□ 0.31
MRPS28-209ENST00000522987 HTR4Q13639 388 aa16.99■□□□□ 0.31
MRPS28-209ENST00000522987 ATF7IP2Q5U623 682 aa16.99■□□□□ 0.31
MRPS28-209ENST00000522987 PARM1Q6UWI2 310 aa16.99■□□□□ 0.31
MRPS28-209ENST00000522987 CYP26C1Q6V0L0 522 aa16.99■□□□□ 0.31
MRPS28-209ENST00000522987 SLC7A14Q8TBB6 771 aa16.99■□□□□ 0.31
MRPS28-209ENST00000522987 ING5Q8WYH8 240 aa16.99■□□□□ 0.31
MRPS28-209ENST00000522987 PIK3R5Q8WYR1 880 aa16.99■□□□□ 0.31
MRPS28-209ENST00000522987 IFT74Q96LB3 600 aa16.99■□□□□ 0.31
MRPS28-209ENST00000522987 RTP3Q9BQQ7 232 aa16.99■□□□□ 0.31
MRPS28-209ENST00000522987 ZMYM2Q9UBW7 1377 aa16.99■□□□□ 0.31
MRPS28-209ENST00000522987 FANCMQ8IYD8 2048 aa16.98■□□□□ 0.31
MRPS28-209ENST00000522987 CCDC169A6NNP5 214 aa16.98■□□□□ 0.31
MRPS28-209ENST00000522987 E9PMD0 336 aa16.98■□□□□ 0.31
MRPS28-209ENST00000522987 LRRN2O75325 713 aa16.98■□□□□ 0.31
MRPS28-209ENST00000522987 HARSP12081 509 aaKnown RBP16.98■□□□□ 0.31
MRPS28-209ENST00000522987 TKTP29401 623 aaKnown RBP16.98■□□□□ 0.31
MRPS28-209ENST00000522987 CDC25AP30304 524 aa16.98■□□□□ 0.31
MRPS28-209ENST00000522987 CLCNKBP51801 687 aa16.98■□□□□ 0.31
MRPS28-209ENST00000522987 CREMQ03060 361 aa16.98■□□□□ 0.31
MRPS28-209ENST00000522987 PPP2R5AQ15172 486 aa16.98■□□□□ 0.31
MRPS28-209ENST00000522987 RSPO2Q6UXX9 243 aaPredicted RBP16.98■□□□□ 0.31
MRPS28-209ENST00000522987 FAM184AQ8NB25 1140 aa16.98■□□□□ 0.31
MRPS28-209ENST00000522987 ITFG1Q8TB96 612 aa16.98■□□□□ 0.31
MRPS28-209ENST00000522987 SNX29Q8TEQ0 813 aa16.98■□□□□ 0.31
MRPS28-209ENST00000522987 FGF14Q92915 247 aa16.98■□□□□ 0.31
MRPS28-209ENST00000522987 NKD2Q969F2 451 aaPredicted RBP16.98■□□□□ 0.31
MRPS28-209ENST00000522987 FOXQ1Q9C009 403 aa16.98■□□□□ 0.31
MRPS28-209ENST00000522987 FOXP1Q9H334 677 aaPredicted RBP16.98■□□□□ 0.31
MRPS28-209ENST00000522987 WNT16Q9UBV4 365 aa16.98■□□□□ 0.31
MRPS28-209ENST00000522987 LRWD1Q9UFC0 647 aa16.98■□□□□ 0.31
MRPS28-209ENST00000522987 R4GN57 208 aa16.98■□□□□ 0.31
MRPS28-209ENST00000522987 B3GAT3O94766 335 aa16.97■□□□□ 0.31
MRPS28-209ENST00000522987 PEX3P56589 373 aa16.97■□□□□ 0.31
MRPS28-209ENST00000522987 SOX4Q06945 474 aaPredicted RBP16.97■□□□□ 0.31
MRPS28-209ENST00000522987 ZRSR1Q15695 479 aaKnown RBP16.97■□□□□ 0.31
MRPS28-209ENST00000522987 DCAF4L1Q3SXM0 396 aa16.97■□□□□ 0.31
MRPS28-209ENST00000522987 AXDND1Q5T1B0 1012 aaPredicted RBP16.97■□□□□ 0.31
MRPS28-209ENST00000522987 HAUS3Q68CZ6 603 aa16.97■□□□□ 0.31
MRPS28-209ENST00000522987 ADSSL1Q8N142 457 aa16.97■□□□□ 0.31
MRPS28-209ENST00000522987 TMEM130Q8N3G9 435 aa16.97■□□□□ 0.31
MRPS28-209ENST00000522987 C4orf32Q8N8J7 132 aa16.97■□□□□ 0.31
MRPS28-209ENST00000522987 C3orf58Q8NDZ4 430 aa16.97■□□□□ 0.31
MRPS28-209ENST00000522987 FBXO18Q8NFZ0 1043 aa16.97■□□□□ 0.31
MRPS28-209ENST00000522987 KXD1Q9BQD3 176 aa16.97■□□□□ 0.31
MRPS28-209ENST00000522987 RHOBTB2Q9BYZ6 727 aa16.97■□□□□ 0.31
MRPS28-209ENST00000522987 ARHGEF3Q9NR81 526 aa16.97■□□□□ 0.31
MRPS28-209ENST00000522987 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.97■□□□□ 0.31
MRPS28-209ENST00000522987 NOL7Q9UMY1 257 aaKnown RBP16.97■□□□□ 0.31
MRPS28-209ENST00000522987 PCDHB6Q9Y5E3 794 aa16.97■□□□□ 0.31
MRPS28-209ENST00000522987 CDY1Q9Y6F8 540 aa16.97■□□□□ 0.31
MRPS28-209ENST00000522987 PATJQ8NI35 1801 aa16.97■□□□□ 0.31
MRPS28-209ENST00000522987 MYO15AQ9UKN7 3530 aa16.97■□□□□ 0.31
MRPS28-209ENST00000522987 K7ERI5 159 aa16.96■□□□□ 0.31
MRPS28-209ENST00000522987 ARPP19P56211 112 aa16.96■□□□□ 0.31
MRPS28-209ENST00000522987 GPC5P78333 572 aa16.96■□□□□ 0.31
MRPS28-209ENST00000522987 RAD51AP2Q09MP3 1159 aa16.96■□□□□ 0.31
MRPS28-209ENST00000522987 PTGDRQ13258 359 aa16.96■□□□□ 0.31
MRPS28-209ENST00000522987 DCLRE1AQ6PJP8 1040 aa16.96■□□□□ 0.31
MRPS28-209ENST00000522987 KCNG4Q8TDN1 519 aa16.96■□□□□ 0.31
MRPS28-209ENST00000522987 PPP1R10Q96QC0 940 aaKnown RBP16.96■□□□□ 0.31
MRPS28-209ENST00000522987 TARS2Q9BW92 718 aaKnown RBP16.96■□□□□ 0.31
MRPS28-209ENST00000522987 CDT1Q9H211 546 aa16.96■□□□□ 0.31
MRPS28-209ENST00000522987 SFI1A8K8P3 1242 aa16.95■□□□□ 0.3
MRPS28-209ENST00000522987 ANHXE9PGG2 379 aa16.95■□□□□ 0.3
MRPS28-209ENST00000522987 HIP1RO75146 1068 aa16.95■□□□□ 0.3
MRPS28-209ENST00000522987 RBM25P49756 843 aaKnown RBP16.95■□□□□ 0.3
MRPS28-209ENST00000522987 TOB1P50616 345 aaPredicted RBP16.95■□□□□ 0.3
MRPS28-209ENST00000522987 FXR2P51116 673 aaKnown RBP eCLIP16.95■□□□□ 0.3
MRPS28-209ENST00000522987 ZNF568Q3ZCX4 644 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms