RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 FKBP3Q00688 224 aaKnown RBP12.99□□□□□ -0.33
PVT1-215ENST00000522963 MYL5Q02045 173 aa12.99□□□□□ -0.33
PVT1-215ENST00000522963 ADGRE1Q14246 886 aa12.99□□□□□ -0.33
PVT1-215ENST00000522963 MYBPC2Q14324 1141 aa12.99□□□□□ -0.33
PVT1-215ENST00000522963 CCDC85BQ15834 202 aaPredicted RBP12.99□□□□□ -0.33
PVT1-215ENST00000522963 EPC2Q52LR7 807 aa12.99□□□□□ -0.33
PVT1-215ENST00000522963 SEZ6Q53EL9 994 aa12.99□□□□□ -0.33
PVT1-215ENST00000522963 ZBTB41Q5SVQ8 909 aa12.99□□□□□ -0.33
PVT1-215ENST00000522963 FAM43BQ6ZT52 329 aaPredicted RBP12.99□□□□□ -0.33
PVT1-215ENST00000522963 THNSL1Q8IYQ7 743 aa12.99□□□□□ -0.33
PVT1-215ENST00000522963 CMTR2Q8IYT2 770 aaKnown RBP12.99□□□□□ -0.33
PVT1-215ENST00000522963 CRIPAKQ8N1N5 446 aa12.99□□□□□ -0.33
PVT1-215ENST00000522963 CSGALNACT2Q8N6G5 542 aa12.99□□□□□ -0.33
PVT1-215ENST00000522963 CEP120Q8N960 986 aa12.99□□□□□ -0.33
PVT1-215ENST00000522963 XXYLT1Q8NBI6 393 aa12.99□□□□□ -0.33
PVT1-215ENST00000522963 FAM200AQ8TCP9 573 aa12.99□□□□□ -0.33
PVT1-215ENST00000522963 HELQQ8TDG4 1101 aa12.99□□□□□ -0.33
PVT1-215ENST00000522963 SRRTQ9BXP5 876 aaKnown RBP12.99□□□□□ -0.33
PVT1-215ENST00000522963 TRIM6Q9C030 488 aaPredicted RBP12.99□□□□□ -0.33
PVT1-215ENST00000522963 ELAC1Q9H777 363 aaKnown RBP12.99□□□□□ -0.33
PVT1-215ENST00000522963 HCSTQ9UBK5 93 aa12.99□□□□□ -0.33
PVT1-215ENST00000522963 INPP5FQ9Y2H2 1132 aa12.99□□□□□ -0.33
PVT1-215ENST00000522963 STXBP5LQ9Y2K9 1186 aa12.99□□□□□ -0.33
PVT1-215ENST00000522963 PCDHB2Q9Y5E7 798 aa12.99□□□□□ -0.33
PVT1-215ENST00000522963 MYO7AQ13402 2215 aa12.98□□□□□ -0.33
PVT1-215ENST00000522963 KIAA1671Q9BY89 1806 aa12.98□□□□□ -0.33
PVT1-215ENST00000522963 MEIS3P2A8K0S8 358 aa12.98□□□□□ -0.33
PVT1-215ENST00000522963 IKBKBO14920 756 aa12.98□□□□□ -0.33
PVT1-215ENST00000522963 KIAA0391O15091 583 aaKnown RBP12.98□□□□□ -0.33
PVT1-215ENST00000522963 HOXA2O43364 376 aa12.98□□□□□ -0.33
PVT1-215ENST00000522963 EXTL3O43909 919 aa12.98□□□□□ -0.33
PVT1-215ENST00000522963 EXOC3O60645 756 aa12.98□□□□□ -0.33
PVT1-215ENST00000522963 AKAP3O75969 853 aa12.98□□□□□ -0.33
PVT1-215ENST00000522963 SKIP12755 728 aa12.98□□□□□ -0.33
PVT1-215ENST00000522963 ATF7P17544 494 aaPredicted RBP12.98□□□□□ -0.33
PVT1-215ENST00000522963 RPL13P26373 211 aaKnown RBP12.98□□□□□ -0.33
PVT1-215ENST00000522963 TNFSF9P41273 254 aa12.98□□□□□ -0.33
PVT1-215ENST00000522963 ACOT2P49753 483 aa12.98□□□□□ -0.33
PVT1-215ENST00000522963 RAB27AP51159 221 aa12.98□□□□□ -0.33
PVT1-215ENST00000522963 TPD52L1Q16890 204 aaPredicted RBP12.98□□□□□ -0.33
PVT1-215ENST00000522963 CEP135Q66GS9 1140 aa12.98□□□□□ -0.33
PVT1-215ENST00000522963 CRELD2Q6UXH1 353 aaPredicted RBP12.98□□□□□ -0.33
PVT1-215ENST00000522963 APBB1IPQ7Z5R6 666 aaPredicted RBP12.98□□□□□ -0.33
PVT1-215ENST00000522963 LUZP1Q86V48 1076 aa12.98□□□□□ -0.33
PVT1-215ENST00000522963 CBWD2Q8IUF1 395 aa12.98□□□□□ -0.33
PVT1-215ENST00000522963 GPD1LQ8N335 351 aa12.98□□□□□ -0.33
PVT1-215ENST00000522963 SMG8Q8ND04 991 aaKnown RBP12.98□□□□□ -0.33
PVT1-215ENST00000522963 NOC3LQ8WTT2 800 aaKnown RBP12.98□□□□□ -0.33
PVT1-215ENST00000522963 FBXL18Q96ME1 805 aa12.98□□□□□ -0.33
PVT1-215ENST00000522963 CEP63Q96MT8 703 aa12.98□□□□□ -0.33
PVT1-215ENST00000522963 FAM213AQ9BRX8 229 aa12.98□□□□□ -0.33
PVT1-215ENST00000522963 TRAIPQ9BWF2 469 aa12.98□□□□□ -0.33
PVT1-215ENST00000522963 TMEM117Q9H0C3 514 aa12.98□□□□□ -0.33
PVT1-215ENST00000522963 NXF3Q9H4D5 531 aaKnown RBP12.98□□□□□ -0.33
PVT1-215ENST00000522963 RC3H2Q9HBD1 1191 aaKnown RBP12.98□□□□□ -0.33
PVT1-215ENST00000522963 NFE2L3Q9Y4A8 694 aa12.98□□□□□ -0.33
PVT1-215ENST00000522963 HES2Q9Y543 173 aa12.98□□□□□ -0.33
PVT1-215ENST00000522963 IPPQ9Y573 584 aa12.98□□□□□ -0.33
PVT1-215ENST00000522963 RALGAPA2Q2PPJ7 1873 aa12.97□□□□□ -0.33
PVT1-215ENST00000522963 COL4A4P53420 1690 aaPredicted RBP12.97□□□□□ -0.33
PVT1-215ENST00000522963 SMTNL1A8MU46 457 aa12.97□□□□□ -0.33
PVT1-215ENST00000522963 EOMESO95936 686 aa12.97□□□□□ -0.33
PVT1-215ENST00000522963 LDHAP00338 332 aaKnown RBP12.97□□□□□ -0.33
PVT1-215ENST00000522963 ADRB2P07550 413 aa12.97□□□□□ -0.33
PVT1-215ENST00000522963 ITGA4P13612 1032 aa12.97□□□□□ -0.33
PVT1-215ENST00000522963 BMPR1AP36894 532 aa12.97□□□□□ -0.33
PVT1-215ENST00000522963 GRM5P41594 1212 aa12.97□□□□□ -0.33
PVT1-215ENST00000522963 OSTNP61366 133 aa12.97□□□□□ -0.33
PVT1-215ENST00000522963 GPM6BQ13491 265 aa12.97□□□□□ -0.33
PVT1-215ENST00000522963 CLLU1OSQ5K130 101 aa12.97□□□□□ -0.33
PVT1-215ENST00000522963 FILIP1Q7Z7B0 1213 aa12.97□□□□□ -0.33
PVT1-215ENST00000522963 MRPL10Q7Z7H8 261 aaKnown RBP12.97□□□□□ -0.33
PVT1-215ENST00000522963 ZNF598Q86UK7 904 aaKnown RBP12.97□□□□□ -0.33
PVT1-215ENST00000522963 IRF2BP1Q8IU81 584 aa12.97□□□□□ -0.33
PVT1-215ENST00000522963 RDH13Q8NBN7 331 aa12.97□□□□□ -0.33
PVT1-215ENST00000522963 RNF214Q8ND24 703 aa12.97□□□□□ -0.33
PVT1-215ENST00000522963 MAFAQ8NHW3 353 aaPredicted RBP12.97□□□□□ -0.33
PVT1-215ENST00000522963 PGBD4Q96DM1 585 aa12.97□□□□□ -0.33
PVT1-215ENST00000522963 SAMD11Q96NU1 681 aa12.97□□□□□ -0.33
PVT1-215ENST00000522963 CASD1Q96PB1 797 aa12.97□□□□□ -0.33
PVT1-215ENST00000522963 HSD3B7Q9H2F3 369 aa12.97□□□□□ -0.33
PVT1-215ENST00000522963 RNF39Q9H2S5 420 aa12.97□□□□□ -0.33
PVT1-215ENST00000522963 SAMSN1Q9NSI8 373 aaKnown RBP12.97□□□□□ -0.33
PVT1-215ENST00000522963 RNF19AQ9NV58 838 aa12.97□□□□□ -0.33
PVT1-215ENST00000522963 FANCLQ9NW38 375 aa12.97□□□□□ -0.33
PVT1-215ENST00000522963 SNTG2Q9NY99 539 aa12.97□□□□□ -0.33
PVT1-215ENST00000522963 CPSF3Q9UKF6 684 aaKnown RBP12.97□□□□□ -0.33
PVT1-215ENST00000522963 COL4A6Q14031 1691 aa12.96□□□□□ -0.33
PVT1-215ENST00000522963 BECN2A8MW95 431 aa12.96□□□□□ -0.33
PVT1-215ENST00000522963 SLC16A3O15427 465 aaKnown RBP12.96□□□□□ -0.33
PVT1-215ENST00000522963 MEFVO15553 781 aaPredicted RBP12.96□□□□□ -0.33
PVT1-215ENST00000522963 ZNF623O75123 536 aa12.96□□□□□ -0.33
PVT1-215ENST00000522963 FGFR1OPO95684 399 aaKnown RBP12.96□□□□□ -0.33
PVT1-215ENST00000522963 CLTAP09496 248 aa12.96□□□□□ -0.33
PVT1-215ENST00000522963 PSMC2P35998 433 aaKnown RBP12.96□□□□□ -0.33
PVT1-215ENST00000522963 WNT7BP56706 349 aa12.96□□□□□ -0.33
PVT1-215ENST00000522963 RNASELQ05823 741 aaKnown RBP12.96□□□□□ -0.33
PVT1-215ENST00000522963 SNRNP35Q16560 246 aaKnown RBP12.96□□□□□ -0.33
PVT1-215ENST00000522963 HSP90AA4PQ58FG1 418 aa12.96□□□□□ -0.33
PVT1-215ENST00000522963 CDKAL1Q5VV42 579 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms