RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 MEFVO15553 781 aaPredicted RBP20.5■□□□□ 0.87
SPIDR-220ENST00000522900 SLC26A4O43511 780 aa20.5■□□□□ 0.87
SPIDR-220ENST00000522900 MAPTP10636 758 aaKnown RBP20.5■□□□□ 0.87
SPIDR-220ENST00000522900 CEBPZQ03701 1054 aaKnown RBP20.5■□□□□ 0.87
SPIDR-220ENST00000522900 CD300LGQ6UXG3 332 aa20.5■□□□□ 0.87
SPIDR-220ENST00000522900 GPR149Q86SP6 731 aa20.5■□□□□ 0.87
SPIDR-220ENST00000522900 EPSTI1Q96J88 318 aa20.5■□□□□ 0.87
SPIDR-220ENST00000522900 REEP2Q9BRK0 252 aa20.5■□□□□ 0.87
SPIDR-220ENST00000522900 TCHPQ9BT92 498 aa20.5■□□□□ 0.87
SPIDR-220ENST00000522900 SFXN1Q9H9B4 322 aa20.5■□□□□ 0.87
SPIDR-220ENST00000522900 GOLGA2P5Q9HBQ8 144 aa20.5■□□□□ 0.87
SPIDR-220ENST00000522900 MAN1C1Q9NR34 630 aa20.5■□□□□ 0.87
SPIDR-220ENST00000522900 MTMR6Q9Y217 621 aa20.5■□□□□ 0.87
SPIDR-220ENST00000522900 TDRD15B5MCY1 1934 aaKnown RBP20.5■□□□□ 0.87
SPIDR-220ENST00000522900 SF3B1O75533 1304 aaKnown RBP eCLIP20.5■□□□□ 0.873e-8■■■■■ 80.3
SPIDR-220ENST00000522900 SPDYE4A6NLX3 237 aa20.49■□□□□ 0.87
SPIDR-220ENST00000522900 MCF2P10911 925 aa20.49■□□□□ 0.87
SPIDR-220ENST00000522900 HARSP12081 509 aaKnown RBP20.49■□□□□ 0.87
SPIDR-220ENST00000522900 CLCNKBP51801 687 aa20.49■□□□□ 0.87
SPIDR-220ENST00000522900 SMTNP53814 917 aa20.49■□□□□ 0.87
SPIDR-220ENST00000522900 ZXDAP98168 799 aa20.49■□□□□ 0.87
SPIDR-220ENST00000522900 SOX4Q06945 474 aaPredicted RBP20.49■□□□□ 0.87
SPIDR-220ENST00000522900 SEZ6Q53EL9 994 aa20.49■□□□□ 0.87
SPIDR-220ENST00000522900 XKR4Q5GH76 650 aa20.49■□□□□ 0.87
SPIDR-220ENST00000522900 FAM171A1Q5VUB5 890 aa20.49■□□□□ 0.87
SPIDR-220ENST00000522900 MPZL3Q6UWV2 235 aa20.49■□□□□ 0.87
SPIDR-220ENST00000522900 APBB1IPQ7Z5R6 666 aaPredicted RBP20.49■□□□□ 0.87
SPIDR-220ENST00000522900 CEP57Q86XR8 500 aa20.49■□□□□ 0.87
SPIDR-220ENST00000522900 ZMAT2Q96NC0 199 aaKnown RBP20.49■□□□□ 0.87
SPIDR-220ENST00000522900 CCDC94Q9BW85 323 aaPredicted RBP20.49■□□□□ 0.87
SPIDR-220ENST00000522900 FNIP2Q9P278 1114 aa20.49■□□□□ 0.87
SPIDR-220ENST00000522900 FBXO2Q9UK22 296 aaPredicted RBP20.49■□□□□ 0.87
SPIDR-220ENST00000522900 BRD1O95696 1058 aa20.48■□□□□ 0.87
SPIDR-220ENST00000522900 GLUD1P00367 558 aa20.48■□□□□ 0.87
SPIDR-220ENST00000522900 STRN3Q13033 797 aa20.48■□□□□ 0.87
SPIDR-220ENST00000522900 LILRA6Q6PI73 481 aa20.48■□□□□ 0.87
SPIDR-220ENST00000522900 HFE2Q6ZVN8 426 aa20.48■□□□□ 0.87
SPIDR-220ENST00000522900 GPR65Q8IYL9 337 aa20.48■□□□□ 0.87
SPIDR-220ENST00000522900 LNX1Q8TBB1 728 aaPredicted RBP20.48■□□□□ 0.87
SPIDR-220ENST00000522900 RAD54LQ92698 747 aa20.48■□□□□ 0.87
SPIDR-220ENST00000522900 CLIC6Q96NY7 704 aa20.48■□□□□ 0.87
SPIDR-220ENST00000522900 CCSER1Q9C0I3 900 aa20.48■□□□□ 0.87
SPIDR-220ENST00000522900 HAPLN2Q9GZV7 340 aa20.48■□□□□ 0.87
SPIDR-220ENST00000522900 NR2E1Q9Y466 385 aa20.48■□□□□ 0.87
SPIDR-220ENST00000522900 CCDC195A0A1B0GUA6 201 aa20.47■□□□□ 0.87
SPIDR-220ENST00000522900 TGM5O43548 720 aa20.47■□□□□ 0.87
SPIDR-220ENST00000522900 TOM1L1O75674 476 aa20.47■□□□□ 0.87
SPIDR-220ENST00000522900 RFPL2O75678 378 aa20.47■□□□□ 0.87
SPIDR-220ENST00000522900 YARSP54577 528 aaKnown RBP20.47■□□□□ 0.87
SPIDR-220ENST00000522900 NCKAP1LP55160 1127 aa20.47■□□□□ 0.87
SPIDR-220ENST00000522900 PTPN21Q16825 1174 aa20.47■□□□□ 0.87
SPIDR-220ENST00000522900 TRIM67Q6ZTA4 783 aa20.47■□□□□ 0.87
SPIDR-220ENST00000522900 HAUS6Q7Z4H7 955 aa20.47■□□□□ 0.87
SPIDR-220ENST00000522900 RASSF8Q8NHQ8 419 aa20.47■□□□□ 0.87
SPIDR-220ENST00000522900 SNX27Q96L92 541 aa20.47■□□□□ 0.87
SPIDR-220ENST00000522900 ACAP3Q96P50 834 aa20.47■□□□□ 0.87
SPIDR-220ENST00000522900 CLSTN3Q9BQT9 956 aa20.47■□□□□ 0.87
SPIDR-220ENST00000522900 TTPALQ9BTX7 342 aa20.47■□□□□ 0.87
SPIDR-220ENST00000522900 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.47■□□□□ 0.87
SPIDR-220ENST00000522900 LARSQ9P2J5 1176 aaKnown RBP20.47■□□□□ 0.87
SPIDR-220ENST00000522900 ANKFY1Q9P2R3 1169 aa20.47■□□□□ 0.87
SPIDR-220ENST00000522900 DAXXQ9UER7 740 aaPredicted RBP20.47■□□□□ 0.87
SPIDR-220ENST00000522900 KCNG1Q9UIX4 513 aa20.47■□□□□ 0.87
SPIDR-220ENST00000522900 ODF2LQ9ULJ1 636 aa20.47■□□□□ 0.87
SPIDR-220ENST00000522900 ADAM12O43184 909 aa20.46■□□□□ 0.87
SPIDR-220ENST00000522900 B3GAT3O94766 335 aa20.46■□□□□ 0.87
SPIDR-220ENST00000522900 DDIT3P35638 169 aa20.46■□□□□ 0.87
SPIDR-220ENST00000522900 UPP1Q16831 310 aa20.46■□□□□ 0.87
SPIDR-220ENST00000522900 DCLRE1AQ6PJP8 1040 aa20.46■□□□□ 0.87
SPIDR-220ENST00000522900 MYCT1Q8N699 235 aa20.46■□□□□ 0.87
SPIDR-220ENST00000522900 C3orf58Q8NDZ4 430 aa20.46■□□□□ 0.87
SPIDR-220ENST00000522900 PIK3R5Q8WYR1 880 aa20.46■□□□□ 0.87
SPIDR-220ENST00000522900 C18orf25Q96B23 403 aaPredicted RBP20.46■□□□□ 0.87
SPIDR-220ENST00000522900 USP28Q96RU2 1077 aa20.46■□□□□ 0.87
SPIDR-220ENST00000522900 TOPORSQ9NS56 1045 aaPredicted RBP20.46■□□□□ 0.87
SPIDR-220ENST00000522900 LIMD1Q9UGP4 676 aa20.46■□□□□ 0.87
SPIDR-220ENST00000522900 SRPRBQ9Y5M8 271 aaKnown RBP20.46■□□□□ 0.87
SPIDR-220ENST00000522900 TMEM221A6NGB7 291 aa20.45■□□□□ 0.86
SPIDR-220ENST00000522900 TMEM189-UBE2V1I3L0A0 370 aa20.45■□□□□ 0.86
SPIDR-220ENST00000522900 I3L4J1 428 aa20.45■□□□□ 0.86
SPIDR-220ENST00000522900 M0R296 226 aa20.45■□□□□ 0.86
SPIDR-220ENST00000522900 STX6O43752 255 aa20.45■□□□□ 0.86
SPIDR-220ENST00000522900 KCNE1P15382 129 aa20.45■□□□□ 0.86
SPIDR-220ENST00000522900 BRCC3P46736 316 aa20.45■□□□□ 0.86
SPIDR-220ENST00000522900 ZNF131P52739 623 aa20.45■□□□□ 0.86
SPIDR-220ENST00000522900 SLC10A6Q3KNW5 377 aa20.45■□□□□ 0.86
SPIDR-220ENST00000522900 ZPBP2Q6X784 338 aa20.45■□□□□ 0.86
SPIDR-220ENST00000522900 C15orf39Q6ZRI6 1047 aa20.45■□□□□ 0.86
SPIDR-220ENST00000522900 TMEM130Q8N3G9 435 aa20.45■□□□□ 0.86
SPIDR-220ENST00000522900 CMASQ8NFW8 434 aaPredicted RBP20.45■□□□□ 0.86
SPIDR-220ENST00000522900 LARP4BQ92615 738 aaKnown RBP20.45■□□□□ 0.86
SPIDR-220ENST00000522900 ZHX3Q9H4I2 956 aa20.45■□□□□ 0.86
SPIDR-220ENST00000522900 FAM13AO94988 1023 aa20.44■□□□□ 0.86
SPIDR-220ENST00000522900 KRT18P05783 430 aaKnown RBP20.44■□□□□ 0.86
SPIDR-220ENST00000522900 ASGR2P07307 311 aa20.44■□□□□ 0.86
SPIDR-220ENST00000522900 FGFR3P22607 806 aa20.44■□□□□ 0.86
SPIDR-220ENST00000522900 MCL1Q07820 350 aa20.44■□□□□ 0.86
SPIDR-220ENST00000522900 NOLC1Q14978 699 aaKnown RBP eCLIP20.44■□□□□ 0.86
SPIDR-220ENST00000522900 PSMD5Q16401 504 aa20.44■□□□□ 0.86
SPIDR-220ENST00000522900 TDRD5Q8NAT2 981 aaKnown RBP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms