RNA–Protein interactions for RNA: ENST00000522841.6

SMG1P3-206, Transcript of SMG1 pseudogene 3, humanhuman

TSL 2 BASIC

Gene SMG1P3, Length 2,774 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1P3-206ENST00000522841 TIPINQ9BVW5 301 aa17.49■□□□□ 0.39
SMG1P3-206ENST00000522841 SEMA4AQ9H3S1 761 aa17.49■□□□□ 0.39
SMG1P3-206ENST00000522841 PMM2O15305 246 aa17.48■□□□□ 0.39
SMG1P3-206ENST00000522841 GRIN3BO60391 1043 aa17.48■□□□□ 0.39
SMG1P3-206ENST00000522841 RGS20O76081 388 aa17.48■□□□□ 0.39
SMG1P3-206ENST00000522841 STBD1O95210 358 aa17.48■□□□□ 0.39
SMG1P3-206ENST00000522841 CYP1A2P05177 515 aa17.48■□□□□ 0.39
SMG1P3-206ENST00000522841 CHRNA3P32297 505 aa17.48■□□□□ 0.39
SMG1P3-206ENST00000522841 GMPSP49915 693 aaPredicted RBP17.48■□□□□ 0.39
SMG1P3-206ENST00000522841 SNRPFP62306 86 aaKnown RBP17.48■□□□□ 0.39
SMG1P3-206ENST00000522841 B4GALNT4Q76KP1 1039 aa17.48■□□□□ 0.39
SMG1P3-206ENST00000522841 SLC13A5Q86YT5 568 aaPredicted RBP17.48■□□□□ 0.39
SMG1P3-206ENST00000522841 CCDC105Q8IYK2 499 aa17.48■□□□□ 0.39
SMG1P3-206ENST00000522841 MFSD14AQ96MC6 490 aa17.48■□□□□ 0.39
SMG1P3-206ENST00000522841 WNT8AQ9H1J5 351 aa17.48■□□□□ 0.39
SMG1P3-206ENST00000522841 PIM2Q9P1W9 311 aa17.48■□□□□ 0.39
SMG1P3-206ENST00000522841 COQ4Q9Y3A0 265 aa17.48■□□□□ 0.39
SMG1P3-206ENST00000522841 SSTR3P32745 418 aaPredicted RBP17.48■□□□□ 0.39
SMG1P3-206ENST00000522841 SLC29A2Q14542 456 aa17.48■□□□□ 0.39
SMG1P3-206ENST00000522841 CCDC60Q8IWA6 550 aaPredicted RBP17.48■□□□□ 0.39
SMG1P3-206ENST00000522841 ZNF516Q92618 1163 aa17.48■□□□□ 0.39
SMG1P3-206ENST00000522841 XPNPEP1Q9NQW7 623 aa17.48■□□□□ 0.39
SMG1P3-206ENST00000522841 RASAL2Q9UJF2 1139 aa17.48■□□□□ 0.39
SMG1P3-206ENST00000522841 PNMA2Q9UL42 364 aa17.48■□□□□ 0.39
SMG1P3-206ENST00000522841 CLDN3O15551 220 aa17.47■□□□□ 0.39
SMG1P3-206ENST00000522841 PEX10O60683 326 aa17.47■□□□□ 0.39
SMG1P3-206ENST00000522841 MTA2O94776 668 aa17.47■□□□□ 0.39
SMG1P3-206ENST00000522841 WNT7BP56706 349 aa17.47■□□□□ 0.39
SMG1P3-206ENST00000522841 QPCTQ16769 361 aa17.47■□□□□ 0.39
SMG1P3-206ENST00000522841 MTERF2Q49AM1 385 aa17.47■□□□□ 0.39
SMG1P3-206ENST00000522841 DAB2IPQ5VWQ8 1189 aa17.47■□□□□ 0.39
SMG1P3-206ENST00000522841 TAS1R3Q7RTX0 852 aa17.47■□□□□ 0.39
SMG1P3-206ENST00000522841 WRNIP1Q96S55 665 aa17.47■□□□□ 0.39
SMG1P3-206ENST00000522841 MAP3K20Q9NYL2 800 aaKnown RBP17.47■□□□□ 0.39
SMG1P3-206ENST00000522841 GTF3C4Q9UKN8 822 aa17.47■□□□□ 0.39
SMG1P3-206ENST00000522841 PCDHA3Q9Y5H8 950 aa17.47■□□□□ 0.39
SMG1P3-206ENST00000522841 ZBTB7AO95365 584 aa17.47■□□□□ 0.39
SMG1P3-206ENST00000522841 FAM107AO95990 144 aa17.47■□□□□ 0.39
SMG1P3-206ENST00000522841 KCNA2P16389 499 aa17.47■□□□□ 0.39
SMG1P3-206ENST00000522841 SNX1Q13596 522 aa17.47■□□□□ 0.39
SMG1P3-206ENST00000522841 SIX1Q15475 284 aaPredicted RBP17.47■□□□□ 0.39
SMG1P3-206ENST00000522841 C1orf54Q8WWF1 131 aa17.47■□□□□ 0.39
SMG1P3-206ENST00000522841 CPA5Q8WXQ8 436 aa17.47■□□□□ 0.39
SMG1P3-206ENST00000522841 RAPGEF5Q92565 580 aa17.47■□□□□ 0.39
SMG1P3-206ENST00000522841 PABPC3Q9H361 631 aaKnown RBP17.47■□□□□ 0.39
SMG1P3-206ENST00000522841 PCYOX1Q9UHG3 505 aa17.47■□□□□ 0.39
SMG1P3-206ENST00000522841 RGPD3A6NKT7 1758 aaPredicted RBP17.47■□□□□ 0.39
SMG1P3-206ENST00000522841 RGPD4Q7Z3J3 1758 aa17.47■□□□□ 0.39
SMG1P3-206ENST00000522841 FGFR4P22455 802 aa17.46■□□□□ 0.39
SMG1P3-206ENST00000522841 COILP38432 576 aaPredicted RBP17.46■□□□□ 0.39
SMG1P3-206ENST00000522841 BACE1P56817 501 aa17.46■□□□□ 0.39
SMG1P3-206ENST00000522841 PRKCEQ02156 737 aa17.46■□□□□ 0.39
SMG1P3-206ENST00000522841 ACAD10Q6JQN1 1059 aa17.46■□□□□ 0.39
SMG1P3-206ENST00000522841 OTUD6AQ7L8S5 288 aa17.46■□□□□ 0.39
SMG1P3-206ENST00000522841 FBXL18Q96ME1 805 aa17.46■□□□□ 0.39
SMG1P3-206ENST00000522841 GMNCA6NCL1 334 aa17.46■□□□□ 0.39
SMG1P3-206ENST00000522841 IFT88Q13099 833 aa17.46■□□□□ 0.39
SMG1P3-206ENST00000522841 PRKG1Q13976 671 aa17.46■□□□□ 0.39
SMG1P3-206ENST00000522841 SPOPLQ6IQ16 392 aa17.46■□□□□ 0.39
SMG1P3-206ENST00000522841 GPD1LQ8N335 351 aa17.46■□□□□ 0.39
SMG1P3-206ENST00000522841 KIFAP3Q92845 792 aa17.46■□□□□ 0.39
SMG1P3-206ENST00000522841 CYFIP2Q96F07 1278 aa17.46■□□□□ 0.39
SMG1P3-206ENST00000522841 NTPCRQ9BSD7 190 aaKnown RBP17.46■□□□□ 0.39
SMG1P3-206ENST00000522841 POLR3FQ9H1D9 316 aaPredicted RBP17.46■□□□□ 0.39
SMG1P3-206ENST00000522841 NFKBIEO00221 500 aa17.45■□□□□ 0.38
SMG1P3-206ENST00000522841 BRD2P25440 801 aaKnown RBP17.45■□□□□ 0.38
SMG1P3-206ENST00000522841 DRG2P55039 364 aaKnown RBP17.45■□□□□ 0.38
SMG1P3-206ENST00000522841 DENND2CQ68D51 928 aa17.45■□□□□ 0.38
SMG1P3-206ENST00000522841 OTUD6BQ8N6M0 293 aa17.45■□□□□ 0.38
SMG1P3-206ENST00000522841 TMC2Q8TDI7 906 aa17.45■□□□□ 0.38
SMG1P3-206ENST00000522841 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.45■□□□□ 0.388e-7■□□□□ 10
SMG1P3-206ENST00000522841 CNOT7Q9UIV1 285 aaKnown RBP17.45■□□□□ 0.38
SMG1P3-206ENST00000522841 ANAPC7Q9UJX3 599 aa17.45■□□□□ 0.38
SMG1P3-206ENST00000522841 PARP14Q460N5 1801 aa17.45■□□□□ 0.38
SMG1P3-206ENST00000522841 H0YHG0 523 aa17.45■□□□□ 0.38
SMG1P3-206ENST00000522841 TRAPPC3O43617 180 aa17.45■□□□□ 0.38
SMG1P3-206ENST00000522841 SLCO1A2P46721 670 aa17.45■□□□□ 0.38
SMG1P3-206ENST00000522841 ACOT2P49753 483 aa17.45■□□□□ 0.38
SMG1P3-206ENST00000522841 RWDD2BP57060 319 aa17.45■□□□□ 0.38
SMG1P3-206ENST00000522841 ZNF280AP59817 542 aaPredicted RBP17.45■□□□□ 0.38
SMG1P3-206ENST00000522841 IFI35P80217 286 aaPredicted RBP17.45■□□□□ 0.38
SMG1P3-206ENST00000522841 TMEM132BQ14DG7 1078 aa17.45■□□□□ 0.38
SMG1P3-206ENST00000522841 RNF187Q5TA31 235 aaPredicted RBP17.45■□□□□ 0.38
SMG1P3-206ENST00000522841 POTEAQ6S8J7 498 aa17.45■□□□□ 0.38
SMG1P3-206ENST00000522841 CCDC25Q86WR0 208 aa17.45■□□□□ 0.38
SMG1P3-206ENST00000522841 CNPY4Q8N129 248 aa17.45■□□□□ 0.38
SMG1P3-206ENST00000522841 SLC17A8Q8NDX2 589 aa17.45■□□□□ 0.38
SMG1P3-206ENST00000522841 SPIRE2Q8WWL2 714 aa17.45■□□□□ 0.38
SMG1P3-206ENST00000522841 ATP6V0A1Q93050 837 aa17.45■□□□□ 0.38
SMG1P3-206ENST00000522841 TMEM143Q96AN5 459 aa17.45■□□□□ 0.38
SMG1P3-206ENST00000522841 JPH1Q9HDC5 661 aaPredicted RBP17.45■□□□□ 0.38
SMG1P3-206ENST00000522841 ARID2Q68CP9 1835 aa17.45■□□□□ 0.38
SMG1P3-206ENST00000522841 CCDC189A1A4V9 331 aa17.45■□□□□ 0.38
SMG1P3-206ENST00000522841 MEFVO15553 781 aaPredicted RBP17.45■□□□□ 0.38
SMG1P3-206ENST00000522841 CFHP08603 1231 aa17.45■□□□□ 0.38
SMG1P3-206ENST00000522841 HSPA6P17066 643 aa17.45■□□□□ 0.38
SMG1P3-206ENST00000522841 ACTR2P61160 394 aa17.45■□□□□ 0.38
SMG1P3-206ENST00000522841 SF3A3Q12874 501 aaKnown RBP eCLIP17.45■□□□□ 0.381e-8■■□□□ 13.2
SMG1P3-206ENST00000522841 CLUL1Q15846 466 aa17.45■□□□□ 0.38
SMG1P3-206ENST00000522841 CLEC16AQ2KHT3 1053 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms