RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 CDH7Q9ULB5 785 aa16.9■□□□□ 0.3
TRAPPC9-213ENST00000522504 MTF2Q9Y483 593 aaPredicted RBP16.9■□□□□ 0.3
TRAPPC9-213ENST00000522504 NEMFO60524 1076 aa16.89■□□□□ 0.29
TRAPPC9-213ENST00000522504 JAK2O60674 1132 aa16.89■□□□□ 0.29
TRAPPC9-213ENST00000522504 MED24O75448 989 aa16.89■□□□□ 0.29
TRAPPC9-213ENST00000522504 C8AP07357 584 aa16.89■□□□□ 0.29
TRAPPC9-213ENST00000522504 STARD6P59095 220 aa16.89■□□□□ 0.29
TRAPPC9-213ENST00000522504 SNW1Q13573 536 aaKnown RBP16.89■□□□□ 0.29
TRAPPC9-213ENST00000522504 ME3Q16798 604 aa16.89■□□□□ 0.29
TRAPPC9-213ENST00000522504 FAM187BQ17R55 369 aa16.89■□□□□ 0.29
TRAPPC9-213ENST00000522504 EEF1DP3Q658K8 133 aa16.89■□□□□ 0.29
TRAPPC9-213ENST00000522504 POTEHQ6S545 545 aa16.89■□□□□ 0.29
TRAPPC9-213ENST00000522504 RSPO2Q6UXX9 243 aaPredicted RBP16.89■□□□□ 0.29
TRAPPC9-213ENST00000522504 CATSPER3Q86XQ3 398 aa16.89■□□□□ 0.29
TRAPPC9-213ENST00000522504 DCLK2Q8N568 766 aa16.89■□□□□ 0.29
TRAPPC9-213ENST00000522504 SEMA4AQ9H3S1 761 aa16.89■□□□□ 0.29
TRAPPC9-213ENST00000522504 PRMT7Q9NVM4 692 aaPredicted RBP16.89■□□□□ 0.29
TRAPPC9-213ENST00000522504 HCFC1R1Q9NWW0 138 aa16.89■□□□□ 0.29
TRAPPC9-213ENST00000522504 THP07101 528 aa16.88■□□□□ 0.29
TRAPPC9-213ENST00000522504 HNRNPA1P09651 372 aaKnown RBP eCLIP16.88■□□□□ 0.29
TRAPPC9-213ENST00000522504 XRCC6P12956 609 aaKnown RBP eCLIP16.88■□□□□ 0.29
TRAPPC9-213ENST00000522504 PPM1LQ5SGD2 360 aa16.88■□□□□ 0.29
TRAPPC9-213ENST00000522504 LIN9Q5TKA1 542 aa16.88■□□□□ 0.29
TRAPPC9-213ENST00000522504 CD300LGQ6UXG3 332 aa16.88■□□□□ 0.29
TRAPPC9-213ENST00000522504 DIS3L2Q8IYB7 885 aaKnown RBP16.88■□□□□ 0.29
TRAPPC9-213ENST00000522504 NSUN7Q8NE18 718 aaKnown RBP16.88■□□□□ 0.29
TRAPPC9-213ENST00000522504 SLC7A14Q8TBB6 771 aa16.88■□□□□ 0.29
TRAPPC9-213ENST00000522504 WASF1Q92558 559 aa16.88■□□□□ 0.29
TRAPPC9-213ENST00000522504 PRIMPOLQ96LW4 560 aa16.88■□□□□ 0.29
TRAPPC9-213ENST00000522504 DDX23Q9BUQ8 820 aaKnown RBP16.88■□□□□ 0.29
TRAPPC9-213ENST00000522504 CCDC113Q9H0I3 377 aa16.88■□□□□ 0.29
TRAPPC9-213ENST00000522504 POLD4Q9HCU8 107 aa16.88■□□□□ 0.29
TRAPPC9-213ENST00000522504 POLIQ9UNA4 740 aa16.88■□□□□ 0.29
TRAPPC9-213ENST00000522504 ZFP37Q9Y6Q3 630 aaPredicted RBP16.88■□□□□ 0.29
TRAPPC9-213ENST00000522504 ATP2B1P20020 1258 aa16.87■□□□□ 0.29
TRAPPC9-213ENST00000522504 PRPF4BQ13523 1007 aaKnown RBP16.87■□□□□ 0.29
TRAPPC9-213ENST00000522504 AXDND1Q5T1B0 1012 aaPredicted RBP16.87■□□□□ 0.29
TRAPPC9-213ENST00000522504 GTF3C6Q969F1 213 aa16.87■□□□□ 0.29
TRAPPC9-213ENST00000522504 KXD1Q9BQD3 176 aa16.87■□□□□ 0.29
TRAPPC9-213ENST00000522504 KIFC3Q9BVG8 833 aa16.87■□□□□ 0.29
TRAPPC9-213ENST00000522504 BRMS1Q9HCU9 246 aa16.87■□□□□ 0.29
TRAPPC9-213ENST00000522504 DNMT3BQ9UBC3 853 aaKnown RBP16.87■□□□□ 0.29
TRAPPC9-213ENST00000522504 MED19A0JLT2 244 aaPredicted RBP16.86■□□□□ 0.29
TRAPPC9-213ENST00000522504 N4BP3O15049 544 aa16.86■□□□□ 0.29
TRAPPC9-213ENST00000522504 PRKCBP05771 671 aa16.86■□□□□ 0.29
TRAPPC9-213ENST00000522504 LIG1P18858 919 aa16.86■□□□□ 0.29
TRAPPC9-213ENST00000522504 CD72P21854 359 aa16.86■□□□□ 0.29
TRAPPC9-213ENST00000522504 FGFR3P22607 806 aa16.86■□□□□ 0.29
TRAPPC9-213ENST00000522504 HOXA9P31269 272 aa16.86■□□□□ 0.29
TRAPPC9-213ENST00000522504 OR1D2P34982 312 aa16.86■□□□□ 0.29
TRAPPC9-213ENST00000522504 RAB33AQ14088 237 aa16.86■□□□□ 0.29
TRAPPC9-213ENST00000522504 GLRA4Q5JXX5 417 aa16.86■□□□□ 0.29
TRAPPC9-213ENST00000522504 ZBTB8OSQ8IWT0 167 aa16.86■□□□□ 0.29
TRAPPC9-213ENST00000522504 NPAS3Q8IXF0 933 aa16.86■□□□□ 0.29
TRAPPC9-213ENST00000522504 MCPH1Q8NEM0 835 aa16.86■□□□□ 0.29
TRAPPC9-213ENST00000522504 GDAQ9Y2T3 454 aa16.86■□□□□ 0.29
TRAPPC9-213ENST00000522504 NOTCH4Q99466 2003 aa16.86■□□□□ 0.29
TRAPPC9-213ENST00000522504 KANSL1LA0AUZ9 987 aa16.85■□□□□ 0.29
TRAPPC9-213ENST00000522504 I3L4J1 428 aa16.85■□□□□ 0.29
TRAPPC9-213ENST00000522504 ACKR2O00590 384 aa16.85■□□□□ 0.29
TRAPPC9-213ENST00000522504 MCM7P33993 719 aa16.85■□□□□ 0.29
TRAPPC9-213ENST00000522504 ST3GAL1Q11201 340 aa16.85■□□□□ 0.29
TRAPPC9-213ENST00000522504 MLF2Q15773 248 aaPredicted RBP16.85■□□□□ 0.29
TRAPPC9-213ENST00000522504 SLC44A4Q53GD3 710 aa16.85■□□□□ 0.29
TRAPPC9-213ENST00000522504 NT5DC1Q5TFE4 455 aa16.85■□□□□ 0.29
TRAPPC9-213ENST00000522504 PADI6Q6TGC4 694 aa16.85■□□□□ 0.29
TRAPPC9-213ENST00000522504 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.85■□□□□ 0.29
TRAPPC9-213ENST00000522504 SUMF1Q8NBK3 374 aa16.85■□□□□ 0.29
TRAPPC9-213ENST00000522504 C3orf58Q8NDZ4 430 aa16.85■□□□□ 0.29
TRAPPC9-213ENST00000522504 ING5Q8WYH8 240 aa16.85■□□□□ 0.29
TRAPPC9-213ENST00000522504 PPP1R10Q96QC0 940 aaKnown RBP16.85■□□□□ 0.29
TRAPPC9-213ENST00000522504 TUFT1Q9NNX1 390 aa16.85■□□□□ 0.29
TRAPPC9-213ENST00000522504 MTRRQ9UBK8 725 aa16.85■□□□□ 0.29
TRAPPC9-213ENST00000522504 VWA8A3KMH1 1905 aa16.85■□□□□ 0.29
TRAPPC9-213ENST00000522504 XYLBO75191 536 aa16.84■□□□□ 0.29
TRAPPC9-213ENST00000522504 CYP11B2P19099 503 aa16.84■□□□□ 0.29
TRAPPC9-213ENST00000522504 TKTP29401 623 aaKnown RBP16.84■□□□□ 0.29
TRAPPC9-213ENST00000522504 CLCNKBP51801 687 aa16.84■□□□□ 0.29
TRAPPC9-213ENST00000522504 ECM1Q16610 540 aa16.84■□□□□ 0.29
TRAPPC9-213ENST00000522504 MAPK6Q16659 721 aa16.84■□□□□ 0.29
TRAPPC9-213ENST00000522504 TMEM132AQ24JP5 1023 aa16.84■□□□□ 0.29
TRAPPC9-213ENST00000522504 SLC5A9Q2M3M2 681 aa16.84■□□□□ 0.29
TRAPPC9-213ENST00000522504 MTSS1LQ765P7 747 aa16.84■□□□□ 0.29
TRAPPC9-213ENST00000522504 SHDQ96IW2 340 aa16.84■□□□□ 0.29
TRAPPC9-213ENST00000522504 NACC1Q96RE7 527 aa16.84■□□□□ 0.29
TRAPPC9-213ENST00000522504 POLR3CQ9BUI4 534 aaPredicted RBP16.84■□□□□ 0.29
TRAPPC9-213ENST00000522504 PLA2G2FQ9BZM2 168 aa16.84■□□□□ 0.29
TRAPPC9-213ENST00000522504 C2orf40Q9H1Z8 148 aa16.84■□□□□ 0.29
TRAPPC9-213ENST00000522504 GOLGA2P5Q9HBQ8 144 aa16.84■□□□□ 0.29
TRAPPC9-213ENST00000522504 CDY1Q9Y6F8 540 aa16.84■□□□□ 0.29
TRAPPC9-213ENST00000522504 MYH15Q9Y2K3 1946 aa16.84■□□□□ 0.29
TRAPPC9-213ENST00000522504 SHISA7A6NL88 538 aa16.83■□□□□ 0.28
TRAPPC9-213ENST00000522504 FAM170BA6NMN3 283 aa16.83■□□□□ 0.28
TRAPPC9-213ENST00000522504 NRG2O14511 850 aaPredicted RBP16.83■□□□□ 0.28
TRAPPC9-213ENST00000522504 B3GAT3O94766 335 aa16.83■□□□□ 0.28
TRAPPC9-213ENST00000522504 POU2F2P09086 479 aa16.83■□□□□ 0.28
TRAPPC9-213ENST00000522504 NAMPTP43490 491 aa16.83■□□□□ 0.28
TRAPPC9-213ENST00000522504 GUCY1B3Q02153 619 aa16.83■□□□□ 0.28
TRAPPC9-213ENST00000522504 PRKCQQ04759 706 aa16.83■□□□□ 0.28
TRAPPC9-213ENST00000522504 SOX4Q06945 474 aaPredicted RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms