RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 PARP2Q9UGN5 583 aa14.53□□□□□ -0.08
CLK4-210ENST00000522136 RECQL4O94761 1208 aa14.53□□□□□ -0.08
CLK4-210ENST00000522136 CSF2RAP15509 400 aa14.53□□□□□ -0.08
CLK4-210ENST00000522136 GCLMP48507 274 aa14.53□□□□□ -0.08
CLK4-210ENST00000522136 UBXN1Q04323 297 aa14.53□□□□□ -0.08
CLK4-210ENST00000522136 FILIP1LQ4L180 1135 aa14.53□□□□□ -0.08
CLK4-210ENST00000522136 TNS4Q8IZW8 715 aa14.53□□□□□ -0.08
CLK4-210ENST00000522136 TMEM130Q8N3G9 435 aa14.53□□□□□ -0.08
CLK4-210ENST00000522136 SEPT8Q92599 483 aa14.53□□□□□ -0.08
CLK4-210ENST00000522136 RGS18Q9NS28 235 aa14.53□□□□□ -0.08
CLK4-210ENST00000522136 TTC26A0AVF1 554 aa14.52□□□□□ -0.09
CLK4-210ENST00000522136 AFPP02771 609 aaKnown RBP14.52□□□□□ -0.09
CLK4-210ENST00000522136 TPM2P07951 284 aa14.52□□□□□ -0.09
CLK4-210ENST00000522136 KYAT1Q16773 422 aa14.52□□□□□ -0.09
CLK4-210ENST00000522136 CBWD6Q4V339 395 aa14.52□□□□□ -0.09
CLK4-210ENST00000522136 CBWD3Q5JTY5 395 aa14.52□□□□□ -0.09
CLK4-210ENST00000522136 CBWD5Q5RIA9 395 aa14.52□□□□□ -0.09
CLK4-210ENST00000522136 RNF169Q8NCN4 708 aa14.52□□□□□ -0.09
CLK4-210ENST00000522136 FNBP1Q96RU3 617 aa14.52□□□□□ -0.09
CLK4-210ENST00000522136 A0A0U1RQF3 1178 aa14.51□□□□□ -0.09
CLK4-210ENST00000522136 C9IYK1 514 aa14.51□□□□□ -0.09
CLK4-210ENST00000522136 ENPP3O14638 875 aa14.51□□□□□ -0.09
CLK4-210ENST00000522136 CBFA2T2O43439 604 aa14.51□□□□□ -0.09
CLK4-210ENST00000522136 PARNO95453 639 aaKnown RBP14.51□□□□□ -0.09
CLK4-210ENST00000522136 ATF7P17544 494 aaPredicted RBP14.51□□□□□ -0.09
CLK4-210ENST00000522136 TNNI1P19237 187 aa14.51□□□□□ -0.09
CLK4-210ENST00000522136 FMO5P49326 533 aa14.51□□□□□ -0.09
CLK4-210ENST00000522136 MCCD1P59942 119 aaPredicted RBP14.51□□□□□ -0.09
CLK4-210ENST00000522136 SCARA3Q6AZY7 606 aa14.51□□□□□ -0.09
CLK4-210ENST00000522136 MFSD5Q6N075 450 aa14.51□□□□□ -0.09
CLK4-210ENST00000522136 ECHDC2Q86YB7 292 aa14.51□□□□□ -0.09
CLK4-210ENST00000522136 EFCAB13Q8IY85 973 aa14.51□□□□□ -0.09
CLK4-210ENST00000522136 OR5B17Q8NGF7 314 aa14.51□□□□□ -0.09
CLK4-210ENST00000522136 CRACR2AQ9BSW2 395 aa14.51□□□□□ -0.09
CLK4-210ENST00000522136 TRAIPQ9BWF2 469 aa14.51□□□□□ -0.09
CLK4-210ENST00000522136 NFICP08651 508 aa14.51□□□□□ -0.09
CLK4-210ENST00000522136 ITGA4P13612 1032 aa14.51□□□□□ -0.09
CLK4-210ENST00000522136 SYN1P17600 705 aa14.51□□□□□ -0.09
CLK4-210ENST00000522136 KLK7P49862 253 aa14.51□□□□□ -0.09
CLK4-210ENST00000522136 YARSP54577 528 aaKnown RBP14.51□□□□□ -0.09
CLK4-210ENST00000522136 PPP2R3AQ06190 1150 aa14.51□□□□□ -0.09
CLK4-210ENST00000522136 HSP90AA2PQ14568 343 aaPredicted RBP14.51□□□□□ -0.09
CLK4-210ENST00000522136 JADE1Q6IE81 842 aa14.51□□□□□ -0.09
CLK4-210ENST00000522136 AGMOQ6ZNB7 445 aa14.51□□□□□ -0.09
CLK4-210ENST00000522136 MRPL10Q7Z7H8 261 aaKnown RBP14.51□□□□□ -0.09
CLK4-210ENST00000522136 SNX27Q96L92 541 aa14.51□□□□□ -0.09
CLK4-210ENST00000522136 CGRRF1Q99675 332 aa14.51□□□□□ -0.09
CLK4-210ENST00000522136 FTHL17Q9BXU8 183 aa14.51□□□□□ -0.09
CLK4-210ENST00000522136 TMEM117Q9H0C3 514 aa14.51□□□□□ -0.09
CLK4-210ENST00000522136 TSPYL2Q9H2G4 693 aaPredicted RBP14.51□□□□□ -0.09
CLK4-210ENST00000522136 ZNF623O75123 536 aa14.5□□□□□ -0.09
CLK4-210ENST00000522136 LRRN2O75325 713 aa14.5□□□□□ -0.09
CLK4-210ENST00000522136 IL18RAPO95256 599 aa14.5□□□□□ -0.09
CLK4-210ENST00000522136 ACRP10323 421 aa14.5□□□□□ -0.09
CLK4-210ENST00000522136 AFF1P51825 1210 aaKnown RBP14.5□□□□□ -0.09
CLK4-210ENST00000522136 CLDN10P78369 228 aa14.5□□□□□ -0.09
CLK4-210ENST00000522136 TFAMQ00059 246 aaKnown RBP14.5□□□□□ -0.09
CLK4-210ENST00000522136 GLRA4Q5JXX5 417 aa14.5□□□□□ -0.09
CLK4-210ENST00000522136 ALKAL1Q6UXT8 129 aa14.5□□□□□ -0.09
CLK4-210ENST00000522136 SLC24A5Q71RS6 500 aa14.5□□□□□ -0.09
CLK4-210ENST00000522136 TMEM199Q8N511 208 aa14.5□□□□□ -0.09
CLK4-210ENST00000522136 APBB2Q92870 758 aa14.5□□□□□ -0.09
CLK4-210ENST00000522136 ZMAT2Q96NC0 199 aaKnown RBP14.5□□□□□ -0.09
CLK4-210ENST00000522136 HTATIP2Q9BUP3 242 aa14.5□□□□□ -0.09
CLK4-210ENST00000522136 PRKAG2Q9UGJ0 569 aa14.5□□□□□ -0.09
CLK4-210ENST00000522136 MICAL3Q7RTP6 2002 aa14.49□□□□□ -0.09
CLK4-210ENST00000522136 EVI5O60447 810 aa14.49□□□□□ -0.09
CLK4-210ENST00000522136 RFC2P35250 354 aa14.49□□□□□ -0.09
CLK4-210ENST00000522136 RAB27AP51159 221 aa14.49□□□□□ -0.09
CLK4-210ENST00000522136 FAM189BP81408 668 aa14.49□□□□□ -0.09
CLK4-210ENST00000522136 KCNMA1Q12791 1236 aa14.49□□□□□ -0.09
CLK4-210ENST00000522136 SYCP1Q15431 976 aa14.49□□□□□ -0.09
CLK4-210ENST00000522136 FKBP15Q5T1M5 1219 aa14.49□□□□□ -0.09
CLK4-210ENST00000522136 SV2AQ7L0J3 742 aa14.49□□□□□ -0.09
CLK4-210ENST00000522136 ZNF598Q86UK7 904 aaKnown RBP14.49□□□□□ -0.09
CLK4-210ENST00000522136 BADQ92934 168 aa14.49□□□□□ -0.09
CLK4-210ENST00000522136 ELMO3Q96BJ8 720 aa14.49□□□□□ -0.09
CLK4-210ENST00000522136 MRFAP1L1Q96HT8 127 aa14.49□□□□□ -0.09
CLK4-210ENST00000522136 ZFP42Q96MM3 310 aa14.49□□□□□ -0.09
CLK4-210ENST00000522136 MTMR12Q9C0I1 747 aa14.49□□□□□ -0.09
CLK4-210ENST00000522136 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.49□□□□□ -0.09
CLK4-210ENST00000522136 ZMYND8Q9ULU4 1186 aaPredicted RBP14.49□□□□□ -0.09
CLK4-210ENST00000522136 RALGAPA2Q2PPJ7 1873 aa14.49□□□□□ -0.09
CLK4-210ENST00000522136 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.49□□□□□ -0.09
CLK4-210ENST00000522136 C4BPAP04003 597 aaKnown RBP14.49□□□□□ -0.09
CLK4-210ENST00000522136 PBX1P40424 430 aa14.49□□□□□ -0.09
CLK4-210ENST00000522136 MLH1P40692 756 aa14.49□□□□□ -0.09
CLK4-210ENST00000522136 GUCY2FP51841 1108 aa14.49□□□□□ -0.09
CLK4-210ENST00000522136 TTC3P53804 2025 aa14.49□□□□□ -0.09
CLK4-210ENST00000522136 MYL7Q01449 175 aa14.49□□□□□ -0.09
CLK4-210ENST00000522136 POU5F1Q01860 360 aaKnown RBP14.49□□□□□ -0.09
CLK4-210ENST00000522136 APBA1Q02410 837 aa14.49□□□□□ -0.09
CLK4-210ENST00000522136 PDCD11Q14690 1871 aaKnown RBP14.49□□□□□ -0.09
CLK4-210ENST00000522136 SURF1Q15526 300 aa14.49□□□□□ -0.09
CLK4-210ENST00000522136 TDRD10Q5VZ19 366 aaKnown RBP14.49□□□□□ -0.09
CLK4-210ENST00000522136 CNKSR3Q6P9H4 555 aa14.49□□□□□ -0.09
CLK4-210ENST00000522136 USP37Q86T82 979 aa14.49□□□□□ -0.09
CLK4-210ENST00000522136 WDR49Q8IV35 697 aa14.49□□□□□ -0.09
CLK4-210ENST00000522136 DPF3Q92784 378 aa14.49□□□□□ -0.09
CLK4-210ENST00000522136 KIF12Q96FN5 646 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms