RNA–Protein interactions for RNA: ENST00000522115.6

PTPN12-215, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5

Gene PTPN12, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-215ENST00000522115 USP51Q70EK9 711 aa5.68□□□□□ -1.5
PTPN12-215ENST00000522115 ZNF276Q8N554 614 aa5.68□□□□□ -1.5
PTPN12-215ENST00000522115 ZNF483Q8TF39 744 aaPredicted RBP5.68□□□□□ -1.5
PTPN12-215ENST00000522115 SLC25A43Q8WUT9 341 aaPredicted RBP5.68□□□□□ -1.5
PTPN12-215ENST00000522115 CHMP4CQ96CF2 233 aa5.68□□□□□ -1.5
PTPN12-215ENST00000522115 ZNF341Q9BYN7 854 aa5.68□□□□□ -1.5
PTPN12-215ENST00000522115 CSRNP2Q9H175 543 aa5.68□□□□□ -1.5
PTPN12-215ENST00000522115 SPON1Q9HCB6 807 aa5.68□□□□□ -1.5
PTPN12-215ENST00000522115 TCF7L1Q9HCS4 588 aa5.68□□□□□ -1.5
PTPN12-215ENST00000522115 GPRC5BQ9NZH0 403 aa5.68□□□□□ -1.5
PTPN12-215ENST00000522115 AJAP1Q9UKB5 411 aaPredicted RBP5.68□□□□□ -1.5
PTPN12-215ENST00000522115 PNPLA7Q6ZV29 1317 aa5.68□□□□□ -1.5
PTPN12-215ENST00000522115 HTRA2O43464 458 aaPredicted RBP5.67□□□□□ -1.5
PTPN12-215ENST00000522115 PCSK1P29120 753 aa5.67□□□□□ -1.5
PTPN12-215ENST00000522115 MCM7P33993 719 aa5.67□□□□□ -1.5
PTPN12-215ENST00000522115 PTGS2P35354 604 aa5.67□□□□□ -1.5
PTPN12-215ENST00000522115 GDF5P43026 501 aa5.67□□□□□ -1.5
PTPN12-215ENST00000522115 RECQLP46063 649 aaPredicted RBP5.67□□□□□ -1.5
PTPN12-215ENST00000522115 ALDH1A3P47895 512 aa5.67□□□□□ -1.5
PTPN12-215ENST00000522115 ANAPC15P60006 121 aa5.67□□□□□ -1.5
PTPN12-215ENST00000522115 CDC42EP1Q00587 391 aa5.67□□□□□ -1.5
PTPN12-215ENST00000522115 ATXN7L2Q5T6C5 722 aaPredicted RBP5.67□□□□□ -1.5
PTPN12-215ENST00000522115 FAM102AQ5T9C2 384 aaPredicted RBP5.67□□□□□ -1.5
PTPN12-215ENST00000522115 METRNLQ641Q3 311 aa5.67□□□□□ -1.5
PTPN12-215ENST00000522115 IGFL4Q6B9Z1 124 aa5.67□□□□□ -1.5
PTPN12-215ENST00000522115 MIGA2Q7L4E1 593 aa5.67□□□□□ -1.5
PTPN12-215ENST00000522115 GDF7Q7Z4P5 450 aa5.67□□□□□ -1.5
PTPN12-215ENST00000522115 PNMA8AQ86V59 439 aaPredicted RBP5.67□□□□□ -1.5
PTPN12-215ENST00000522115 PPM1NQ8N819 430 aa5.67□□□□□ -1.5
PTPN12-215ENST00000522115 CPT1CQ8TCG5 803 aa5.67□□□□□ -1.5
PTPN12-215ENST00000522115 DPF2Q92785 391 aa5.67□□□□□ -1.5
PTPN12-215ENST00000522115 COA7Q96BR5 231 aa5.67□□□□□ -1.5
PTPN12-215ENST00000522115 MRI1Q9BV20 369 aa5.67□□□□□ -1.5
PTPN12-215ENST00000522115 TMPRSS5Q9H3S3 457 aa5.67□□□□□ -1.5
PTPN12-215ENST00000522115 SLC23A1Q9UHI7 598 aa5.67□□□□□ -1.5
PTPN12-215ENST00000522115 EIF2B4Q9UI10 523 aaKnown RBP5.67□□□□□ -1.5
PTPN12-215ENST00000522115 INTUQ9ULD6 942 aa5.67□□□□□ -1.5
PTPN12-215ENST00000522115 FZD1Q9UP38 647 aa5.67□□□□□ -1.5
PTPN12-215ENST00000522115 SORCS3Q9UPU3 1222 aa5.67□□□□□ -1.5
PTPN12-215ENST00000522115 SHROOM4Q9ULL8 1493 aa5.66□□□□□ -1.5
PTPN12-215ENST00000522115 MARCH11A6NNE9 402 aa5.66□□□□□ -1.5
PTPN12-215ENST00000522115 LEFTY2O00292 366 aa5.66□□□□□ -1.5
PTPN12-215ENST00000522115 SCAF4O95104 1147 aaKnown RBP5.66□□□□□ -1.5
PTPN12-215ENST00000522115 ATP5JP18859 108 aa5.66□□□□□ -1.5
PTPN12-215ENST00000522115 MAKP20794 623 aa5.66□□□□□ -1.5
PTPN12-215ENST00000522115 FPR1P21462 350 aa5.66□□□□□ -1.5
PTPN12-215ENST00000522115 NR4A1P22736 598 aa5.66□□□□□ -1.5
PTPN12-215ENST00000522115 EDNRBP24530 442 aa5.66□□□□□ -1.5
PTPN12-215ENST00000522115 NHLH2Q02577 135 aa5.66□□□□□ -1.5
PTPN12-215ENST00000522115 ABHD18Q0P651 414 aa5.66□□□□□ -1.5
PTPN12-215ENST00000522115 ODF1Q14990 250 aa5.66□□□□□ -1.5
PTPN12-215ENST00000522115 AGAP9Q5VTM2 703 aa5.66□□□□□ -1.5
PTPN12-215ENST00000522115 PLXDC1Q8IUK5 500 aa5.66□□□□□ -1.5
PTPN12-215ENST00000522115 ZGPATQ8N5A5 531 aaKnown RBP5.66□□□□□ -1.5
PTPN12-215ENST00000522115 HAS1Q92839 578 aa5.66□□□□□ -1.5
PTPN12-215ENST00000522115 MYEOVQ96EZ4 313 aa5.66□□□□□ -1.5
PTPN12-215ENST00000522115 POGKQ9P215 609 aa5.66□□□□□ -1.5
PTPN12-215ENST00000522115 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.66□□□□□ -1.5
PTPN12-215ENST00000522115 LIMCH1Q9UPQ0 1083 aa5.66□□□□□ -1.5
PTPN12-215ENST00000522115 MYBBP1AQ9BQG0 1328 aaKnown RBP5.66□□□□□ -1.5
PTPN12-215ENST00000522115 DRGXA6NNA5 263 aa5.65□□□□□ -1.5
PTPN12-215ENST00000522115 AKAP8O43823 692 aaKnown RBP5.65□□□□□ -1.5
PTPN12-215ENST00000522115 FAM20BO75063 409 aa5.65□□□□□ -1.5
PTPN12-215ENST00000522115 ZRANB2O95218 330 aaKnown RBP eCLIP5.65□□□□□ -1.5
PTPN12-215ENST00000522115 ITGB1P05556 798 aa5.65□□□□□ -1.5
PTPN12-215ENST00000522115 DDCP20711 480 aa5.65□□□□□ -1.5
PTPN12-215ENST00000522115 CTXN1P60606 82 aa5.65□□□□□ -1.5
PTPN12-215ENST00000522115 IGBP1P78318 339 aa5.65□□□□□ -1.5
PTPN12-215ENST00000522115 TARDBPQ13148 414 aaKnown RBP eCLIP5.65□□□□□ -1.5
PTPN12-215ENST00000522115 LRRC55Q6ZSA7 311 aa5.65□□□□□ -1.5
PTPN12-215ENST00000522115 RHOT2Q8IXI1 618 aa5.65□□□□□ -1.5
PTPN12-215ENST00000522115 CMTR2Q8IYT2 770 aaKnown RBP5.65□□□□□ -1.5
PTPN12-215ENST00000522115 SLC16A11Q8NCK7 471 aa5.65□□□□□ -1.5
PTPN12-215ENST00000522115 RNF169Q8NCN4 708 aa5.65□□□□□ -1.5
PTPN12-215ENST00000522115 STAG1Q8WVM7 1258 aa5.65□□□□□ -1.5
PTPN12-215ENST00000522115 LDAHQ9H6V9 325 aa5.65□□□□□ -1.5
PTPN12-215ENST00000522115 DDX56Q9NY93 547 aaKnown RBP5.65□□□□□ -1.5
PTPN12-215ENST00000522115 ACTL7AQ9Y615 435 aa5.65□□□□□ -1.5
PTPN12-215ENST00000522115 HS3ST4Q9Y661 456 aa5.65□□□□□ -1.5
PTPN12-215ENST00000522115 CFAP20Q9Y6A4 193 aaKnown RBP5.65□□□□□ -1.5
PTPN12-215ENST00000522115 CCDC154A6NI56 674 aa5.64□□□□□ -1.51
PTPN12-215ENST00000522115 RNASET2O00584 256 aaKnown RBP5.64□□□□□ -1.51
PTPN12-215ENST00000522115 POMCP01189 267 aa5.64□□□□□ -1.51
PTPN12-215ENST00000522115 SPATA31D3P0C874 917 aa5.64□□□□□ -1.51
PTPN12-215ENST00000522115 RAP2AP10114 183 aa5.64□□□□□ -1.51
PTPN12-215ENST00000522115 ALAS1P13196 640 aa5.64□□□□□ -1.51
PTPN12-215ENST00000522115 ZFP36P26651 326 aaKnown RBP5.64□□□□□ -1.51
PTPN12-215ENST00000522115 BMPR1AP36894 532 aa5.64□□□□□ -1.51
PTPN12-215ENST00000522115 NEK2P51955 445 aa5.64□□□□□ -1.51
PTPN12-215ENST00000522115 KIF23Q02241 960 aaPredicted RBP5.64□□□□□ -1.51
PTPN12-215ENST00000522115 RAB39AQ14964 217 aa5.64□□□□□ -1.51
PTPN12-215ENST00000522115 UBXN2BQ14CS0 331 aa5.64□□□□□ -1.51
PTPN12-215ENST00000522115 PPP4R3AQ6IN85 833 aa5.64□□□□□ -1.51
PTPN12-215ENST00000522115 ARMC6Q6NXE6 501 aa5.64□□□□□ -1.51
PTPN12-215ENST00000522115 SPATA31D4Q6ZUB0 917 aa5.64□□□□□ -1.51
PTPN12-215ENST00000522115 MRGPREQ86SM8 312 aa5.64□□□□□ -1.51
PTPN12-215ENST00000522115 RHOT1Q8IXI2 618 aa5.64□□□□□ -1.51
PTPN12-215ENST00000522115 FBXO18Q8NFZ0 1043 aa5.64□□□□□ -1.51
PTPN12-215ENST00000522115 IFI44Q8TCB0 444 aa5.64□□□□□ -1.51
PTPN12-215ENST00000522115 CCHCR1Q8TD31 782 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 309.5 ms