RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 EXOC3L4Q17RC7 722 aa23.16■■□□□ 1.3
R3HCC1-208ENST00000522012 PPFIBP1Q86W92 1011 aa23.16■■□□□ 1.3
R3HCC1-208ENST00000522012 ZNF516Q92618 1163 aa23.16■■□□□ 1.3
R3HCC1-208ENST00000522012 PPP1R12CQ9BZL4 782 aa23.16■■□□□ 1.3
R3HCC1-208ENST00000522012 TMEM117Q9H0C3 514 aa23.16■■□□□ 1.3
R3HCC1-208ENST00000522012 TMX1Q9H3N1 280 aa23.16■■□□□ 1.3
R3HCC1-208ENST00000522012 TMEM8AQ9HCN3 771 aa23.16■■□□□ 1.3
R3HCC1-208ENST00000522012 TMEM39AQ9NV64 488 aa23.16■■□□□ 1.3
R3HCC1-208ENST00000522012 UMODL1Q5DID0 1318 aa23.15■■□□□ 1.3
R3HCC1-208ENST00000522012 LACTBL1A8MY62 500 aa23.15■■□□□ 1.3
R3HCC1-208ENST00000522012 YARSP54577 528 aaKnown RBP23.15■■□□□ 1.3
R3HCC1-208ENST00000522012 POU5F1Q01860 360 aaKnown RBP23.15■■□□□ 1.3
R3HCC1-208ENST00000522012 SLC10A6Q3KNW5 377 aa23.15■■□□□ 1.3
R3HCC1-208ENST00000522012 KRT39Q6A163 491 aa23.15■■□□□ 1.3
R3HCC1-208ENST00000522012 CPLX3Q8WVH0 158 aa23.15■■□□□ 1.3
R3HCC1-208ENST00000522012 FAM84AQ96KN4 292 aa23.15■■□□□ 1.3
R3HCC1-208ENST00000522012 LSM14BQ9BX40 385 aaKnown RBP23.15■■□□□ 1.3
R3HCC1-208ENST00000522012 IFIH1Q9BYX4 1025 aaKnown RBP23.15■■□□□ 1.3
R3HCC1-208ENST00000522012 FAM207AQ9NSI2 230 aaPredicted RBP23.15■■□□□ 1.3
R3HCC1-208ENST00000522012 IPPQ9Y573 584 aa23.15■■□□□ 1.3
R3HCC1-208ENST00000522012 PCDHB2Q9Y5E7 798 aa23.15■■□□□ 1.3
R3HCC1-208ENST00000522012 GTPBP10A4D1E9 387 aaKnown RBP23.14■■□□□ 1.3
R3HCC1-208ENST00000522012 P4HA2O15460 535 aa23.14■■□□□ 1.3
R3HCC1-208ENST00000522012 CLTBP09497 229 aa23.14■■□□□ 1.3
R3HCC1-208ENST00000522012 TBX2Q13207 712 aaPredicted RBP23.14■■□□□ 1.3
R3HCC1-208ENST00000522012 SV2AQ7L0J3 742 aa23.14■■□□□ 1.3
R3HCC1-208ENST00000522012 CCDC186Q7Z3E2 898 aa23.14■■□□□ 1.3
R3HCC1-208ENST00000522012 WDR49Q8IV35 697 aa23.14■■□□□ 1.3
R3HCC1-208ENST00000522012 FAM105AQ9NUU6 356 aa23.14■■□□□ 1.3
R3HCC1-208ENST00000522012 GCNT4Q9P109 453 aa23.14■■□□□ 1.3
R3HCC1-208ENST00000522012 PARP2Q9UGN5 583 aa23.14■■□□□ 1.3
R3HCC1-208ENST00000522012 PTPRJQ12913 1337 aa23.14■■□□□ 1.29
R3HCC1-208ENST00000522012 MEFVO15553 781 aaPredicted RBP23.13■■□□□ 1.29
R3HCC1-208ENST00000522012 MGEA5O60502 916 aa23.13■■□□□ 1.29
R3HCC1-208ENST00000522012 NBNO60934 754 aa23.13■■□□□ 1.29
R3HCC1-208ENST00000522012 TRIM21P19474 475 aaKnown RBP23.13■■□□□ 1.29
R3HCC1-208ENST00000522012 SLC9A1P19634 815 aa23.13■■□□□ 1.29
R3HCC1-208ENST00000522012 AKAP5P24588 427 aa23.13■■□□□ 1.29
R3HCC1-208ENST00000522012 PON1P27169 355 aa23.13■■□□□ 1.29
R3HCC1-208ENST00000522012 CCL23P55773 120 aa23.13■■□□□ 1.29
R3HCC1-208ENST00000522012 DSC3Q14574 896 aa23.13■■□□□ 1.29
R3HCC1-208ENST00000522012 SMG8Q8ND04 991 aaKnown RBP23.13■■□□□ 1.29
R3HCC1-208ENST00000522012 NEK11Q8NG66 645 aa23.13■■□□□ 1.29
R3HCC1-208ENST00000522012 ADAM2Q99965 735 aa23.13■■□□□ 1.29
R3HCC1-208ENST00000522012 NUP58Q9BVL2 599 aa23.13■■□□□ 1.29
R3HCC1-208ENST00000522012 ASB7Q9H672 318 aa23.13■■□□□ 1.29
R3HCC1-208ENST00000522012 BRCA2P51587 3418 aa23.13■■□□□ 1.29
R3HCC1-208ENST00000522012 TTC26A0AVF1 554 aa23.13■■□□□ 1.29
R3HCC1-208ENST00000522012 TPM1P09493 284 aa23.13■■□□□ 1.29
R3HCC1-208ENST00000522012 CYP2C18P33260 490 aa23.13■■□□□ 1.29
R3HCC1-208ENST00000522012 TFAMQ00059 246 aaKnown RBP23.13■■□□□ 1.29
R3HCC1-208ENST00000522012 BIRC3Q13489 604 aa23.13■■□□□ 1.29
R3HCC1-208ENST00000522012 TRIM14Q14142 442 aa23.13■■□□□ 1.29
R3HCC1-208ENST00000522012 OR5B17Q8NGF7 314 aa23.13■■□□□ 1.29
R3HCC1-208ENST00000522012 SCLYQ96I15 445 aa23.13■■□□□ 1.29
R3HCC1-208ENST00000522012 INTS2Q9H0H0 1204 aaKnown RBP23.13■■□□□ 1.29
R3HCC1-208ENST00000522012 RNF39Q9H2S5 420 aa23.13■■□□□ 1.29
R3HCC1-208ENST00000522012 TBX21Q9UL17 535 aa23.13■■□□□ 1.29
R3HCC1-208ENST00000522012 PMM2O15305 246 aa23.12■■□□□ 1.29
R3HCC1-208ENST00000522012 RECQL4O94761 1208 aa23.12■■□□□ 1.29
R3HCC1-208ENST00000522012 C4BPAP04003 597 aaKnown RBP23.12■■□□□ 1.29
R3HCC1-208ENST00000522012 ACTN1P12814 892 aa23.12■■□□□ 1.29
R3HCC1-208ENST00000522012 AP3M2P53677 418 aa23.12■■□□□ 1.29
R3HCC1-208ENST00000522012 APBA1Q02410 837 aa23.12■■□□□ 1.29
R3HCC1-208ENST00000522012 GPNMBQ14956 572 aa23.12■■□□□ 1.29
R3HCC1-208ENST00000522012 DUOXA2Q1HG44 320 aa23.12■■□□□ 1.29
R3HCC1-208ENST00000522012 JADE1Q6IE81 842 aa23.12■■□□□ 1.29
R3HCC1-208ENST00000522012 CD302Q8IX05 232 aa23.12■■□□□ 1.29
R3HCC1-208ENST00000522012 HACE1Q8IYU2 909 aa23.12■■□□□ 1.29
R3HCC1-208ENST00000522012 EHBP1Q8NDI1 1231 aa23.12■■□□□ 1.29
R3HCC1-208ENST00000522012 WNT8AQ9H1J5 351 aa23.12■■□□□ 1.29
R3HCC1-208ENST00000522012 PLEKHA5Q9HAU0 1116 aa23.12■■□□□ 1.29
R3HCC1-208ENST00000522012 PHACTR2O75167 634 aa23.11■■□□□ 1.29
R3HCC1-208ENST00000522012 GYPCP04921 128 aa23.11■■□□□ 1.29
R3HCC1-208ENST00000522012 TMEM191BP0C7N4 346 aa23.11■■□□□ 1.29
R3HCC1-208ENST00000522012 IBSPP21815 317 aaPredicted RBP23.11■■□□□ 1.29
R3HCC1-208ENST00000522012 CASP14P31944 242 aa23.11■■□□□ 1.29
R3HCC1-208ENST00000522012 GSDMDP57764 484 aa23.11■■□□□ 1.29
R3HCC1-208ENST00000522012 GOLGA8FQ08AF8 430 aa23.11■■□□□ 1.29
R3HCC1-208ENST00000522012 GOLGA8DPQ0D2H9 430 aa23.11■■□□□ 1.29
R3HCC1-208ENST00000522012 EPC2Q52LR7 807 aa23.11■■□□□ 1.29
R3HCC1-208ENST00000522012 TDRD10Q5VZ19 366 aaKnown RBP23.11■■□□□ 1.29
R3HCC1-208ENST00000522012 C15orf39Q6ZRI6 1047 aa23.11■■□□□ 1.29
R3HCC1-208ENST00000522012 EFCAB13Q8IY85 973 aa23.11■■□□□ 1.29
R3HCC1-208ENST00000522012 TAS1R2Q8TE23 839 aa23.11■■□□□ 1.29
R3HCC1-208ENST00000522012 SNX27Q96L92 541 aa23.11■■□□□ 1.29
R3HCC1-208ENST00000522012 KLK14Q9P0G3 267 aa23.11■■□□□ 1.29
R3HCC1-208ENST00000522012 EPHB6O15197 1021 aa23.1■■□□□ 1.29
R3HCC1-208ENST00000522012 TNNC2P02585 160 aa23.1■■□□□ 1.29
R3HCC1-208ENST00000522012 NFICP08651 508 aa23.1■■□□□ 1.29
R3HCC1-208ENST00000522012 ITGA4P13612 1032 aa23.1■■□□□ 1.29
R3HCC1-208ENST00000522012 RAB27AP51159 221 aa23.1■■□□□ 1.29
R3HCC1-208ENST00000522012 ZACNQ401N2 412 aa23.1■■□□□ 1.29
R3HCC1-208ENST00000522012 PRPF38BQ5VTL8 546 aaKnown RBP23.1■■□□□ 1.29
R3HCC1-208ENST00000522012 TRIM65Q6PJ69 517 aa23.1■■□□□ 1.29
R3HCC1-208ENST00000522012 FBXL13Q8NEE6 735 aa23.1■■□□□ 1.29
R3HCC1-208ENST00000522012 SEPT8Q92599 483 aa23.1■■□□□ 1.29
R3HCC1-208ENST00000522012 ANKRD36BP1Q96IX9 119 aa23.1■■□□□ 1.29
R3HCC1-208ENST00000522012 TRAIPQ9BWF2 469 aa23.1■■□□□ 1.29
R3HCC1-208ENST00000522012 MTMR12Q9C0I1 747 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms