RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 DSC1Q08554 894 aa10.02□□□□□ -0.81
TRAPPC9-212ENST00000521944 ELMSAN1Q6PJG2 1045 aa10.02□□□□□ -0.81
TRAPPC9-212ENST00000521944 PDZD3Q86UT5 571 aa10.02□□□□□ -0.81
TRAPPC9-212ENST00000521944 SRBD1Q8N5C6 995 aaKnown RBP10.02□□□□□ -0.81
TRAPPC9-212ENST00000521944 C12orf50Q8NA57 414 aaPredicted RBP10.02□□□□□ -0.81
TRAPPC9-212ENST00000521944 ING5Q8WYH8 240 aa10.02□□□□□ -0.81
TRAPPC9-212ENST00000521944 PGBD1Q96JS3 809 aa10.02□□□□□ -0.81
TRAPPC9-212ENST00000521944 CEP89Q96ST8 783 aa10.02□□□□□ -0.81
TRAPPC9-212ENST00000521944 MAP7D2Q96T17 732 aa10.02□□□□□ -0.81
TRAPPC9-212ENST00000521944 IER2Q9BTL4 223 aa10.02□□□□□ -0.81
TRAPPC9-212ENST00000521944 SPZ1Q9BXG8 430 aa10.02□□□□□ -0.81
TRAPPC9-212ENST00000521944 RBM12Q9NTZ6 932 aaKnown RBP10.02□□□□□ -0.81
TRAPPC9-212ENST00000521944 MIOSQ9NXC5 875 aa10.02□□□□□ -0.81
TRAPPC9-212ENST00000521944 FNIP2Q9P278 1114 aa10.02□□□□□ -0.81
TRAPPC9-212ENST00000521944 DNMT3BQ9UBC3 853 aaKnown RBP10.02□□□□□ -0.81
TRAPPC9-212ENST00000521944 FBXW11Q9UKB1 542 aa10.02□□□□□ -0.81
TRAPPC9-212ENST00000521944 SSX2IPQ9Y2D8 614 aa10.02□□□□□ -0.81
TRAPPC9-212ENST00000521944 hCG_1642624A0A1W2PR95 340 aa10.01□□□□□ -0.81
TRAPPC9-212ENST00000521944 C4orf47A7E2U8 309 aa10.01□□□□□ -0.81
TRAPPC9-212ENST00000521944 FAM86B1E9PN63 330 aa10.01□□□□□ -0.81
TRAPPC9-212ENST00000521944 MAN2B1O00754 1011 aa10.01□□□□□ -0.81
TRAPPC9-212ENST00000521944 ADAM12O43184 909 aa10.01□□□□□ -0.81
TRAPPC9-212ENST00000521944 EPN2O95208 641 aa10.01□□□□□ -0.81
TRAPPC9-212ENST00000521944 FAM86B2P0C5J1 330 aa10.01□□□□□ -0.81
TRAPPC9-212ENST00000521944 PPP2R5DQ14738 602 aa10.01□□□□□ -0.81
TRAPPC9-212ENST00000521944 SLC5A9Q2M3M2 681 aa10.01□□□□□ -0.81
TRAPPC9-212ENST00000521944 UBXN11Q5T124 520 aa10.01□□□□□ -0.81
TRAPPC9-212ENST00000521944 SH3PXD2AQ5TCZ1 1133 aa10.01□□□□□ -0.81
TRAPPC9-212ENST00000521944 RNF43Q68DV7 783 aa10.01□□□□□ -0.81
TRAPPC9-212ENST00000521944 MIS18BP1Q6P0N0 1132 aa10.01□□□□□ -0.81
TRAPPC9-212ENST00000521944 PRSS55Q6UWB4 352 aaPredicted RBP10.01□□□□□ -0.81
TRAPPC9-212ENST00000521944 Q6ZS52 159 aa10.01□□□□□ -0.81
TRAPPC9-212ENST00000521944 KBTBD6Q86V97 674 aa10.01□□□□□ -0.81
TRAPPC9-212ENST00000521944 TICAM2Q86XR7 235 aa10.01□□□□□ -0.81
TRAPPC9-212ENST00000521944 MAP4K3Q8IVH8 894 aa10.01□□□□□ -0.81
TRAPPC9-212ENST00000521944 CKAP2LQ8IYA6 745 aa10.01□□□□□ -0.81
TRAPPC9-212ENST00000521944 CMTR1Q8N1G2 835 aaKnown RBP10.01□□□□□ -0.81
TRAPPC9-212ENST00000521944 SPEM1Q8N4L4 309 aa10.01□□□□□ -0.81
TRAPPC9-212ENST00000521944 FAM3CQ92520 227 aa10.01□□□□□ -0.81
TRAPPC9-212ENST00000521944 RRP36Q96EU6 259 aaKnown RBP10.01□□□□□ -0.81
TRAPPC9-212ENST00000521944 LOXL4Q96JB6 756 aa10.01□□□□□ -0.81
TRAPPC9-212ENST00000521944 CLSTN3Q9BQT9 956 aa10.01□□□□□ -0.81
TRAPPC9-212ENST00000521944 CACNA2D2Q9NY47 1150 aa10.01□□□□□ -0.81
TRAPPC9-212ENST00000521944 MAP10Q9P2G4 905 aa10.01□□□□□ -0.81
TRAPPC9-212ENST00000521944 PIN4Q9Y237 131 aaKnown RBP10.01□□□□□ -0.81
TRAPPC9-212ENST00000521944 TAF6LQ9Y6J9 622 aa10.01□□□□□ -0.81
TRAPPC9-212ENST00000521944 GON4LQ3T8J9 2241 aa10.01□□□□□ -0.81
TRAPPC9-212ENST00000521944 USP9XQ93008 2570 aaPredicted RBP10□□□□□ -0.81
TRAPPC9-212ENST00000521944 TICRRQ7Z2Z1 1910 aa10□□□□□ -0.81
TRAPPC9-212ENST00000521944 A0A087WZ62 844 aa10□□□□□ -0.81
TRAPPC9-212ENST00000521944 SPDYE3A6NKU9 549 aa10□□□□□ -0.81
TRAPPC9-212ENST00000521944 PLEKHA8P1O95397 391 aa10□□□□□ -0.81
TRAPPC9-212ENST00000521944 HNRNPA1P09651 372 aaKnown RBP eCLIP10□□□□□ -0.81
TRAPPC9-212ENST00000521944 SKIP12755 728 aa10□□□□□ -0.81
TRAPPC9-212ENST00000521944 SDSP20132 328 aa10□□□□□ -0.81
TRAPPC9-212ENST00000521944 TMOD1P28289 359 aa10□□□□□ -0.81
TRAPPC9-212ENST00000521944 HOXA6P31267 233 aa10□□□□□ -0.81
TRAPPC9-212ENST00000521944 HOXA11P31270 313 aaPredicted RBP10□□□□□ -0.81
TRAPPC9-212ENST00000521944 KIF5BP33176 963 aa10□□□□□ -0.81
TRAPPC9-212ENST00000521944 OR1G1P47890 313 aa10□□□□□ -0.81
TRAPPC9-212ENST00000521944 GRM2Q14416 872 aa10□□□□□ -0.81
TRAPPC9-212ENST00000521944 TARBP2Q15633 366 aaKnown RBP10□□□□□ -0.81
TRAPPC9-212ENST00000521944 CEP68Q76N32 757 aa10□□□□□ -0.81
TRAPPC9-212ENST00000521944 GPR65Q8IYL9 337 aa10□□□□□ -0.81
TRAPPC9-212ENST00000521944 CYP4X1Q8N118 509 aa10□□□□□ -0.81
TRAPPC9-212ENST00000521944 DNASE1L2Q92874 299 aa10□□□□□ -0.81
TRAPPC9-212ENST00000521944 MCRS1Q96EZ8 462 aa10□□□□□ -0.81
TRAPPC9-212ENST00000521944 FDXACB1Q9BRP7 624 aaPredicted RBP10□□□□□ -0.81
TRAPPC9-212ENST00000521944 IL25Q9H293 177 aa10□□□□□ -0.81
TRAPPC9-212ENST00000521944 CHMP4BQ9H444 224 aaKnown RBP10□□□□□ -0.81
TRAPPC9-212ENST00000521944 CNNM2Q9H8M5 875 aa10□□□□□ -0.81
TRAPPC9-212ENST00000521944 RSAD1Q9HA92 442 aa10□□□□□ -0.81
TRAPPC9-212ENST00000521944 KANSL3Q9P2N6 904 aa10□□□□□ -0.81
TRAPPC9-212ENST00000521944 GABBR1Q9UBS5 961 aa10□□□□□ -0.81
TRAPPC9-212ENST00000521944 KLK13Q9UKR3 277 aa10□□□□□ -0.81
TRAPPC9-212ENST00000521944 WDR81Q562E7 1941 aa9.99□□□□□ -0.81
TRAPPC9-212ENST00000521944 URB1O60287 2271 aaKnown RBP9.99□□□□□ -0.81
TRAPPC9-212ENST00000521944 IGLV3-22A0A075B6J6 115 aa9.99□□□□□ -0.81
TRAPPC9-212ENST00000521944 ARNTLO00327 626 aa9.99□□□□□ -0.81
TRAPPC9-212ENST00000521944 IFIT3O14879 490 aaKnown RBP9.99□□□□□ -0.81
TRAPPC9-212ENST00000521944 HYAL3O43820 417 aaPredicted RBP9.99□□□□□ -0.81
TRAPPC9-212ENST00000521944 C8AP07357 584 aa9.99□□□□□ -0.81
TRAPPC9-212ENST00000521944 SMARCA1P28370 1054 aa9.99□□□□□ -0.81
TRAPPC9-212ENST00000521944 HOXA9P31269 272 aa9.99□□□□□ -0.81
TRAPPC9-212ENST00000521944 RAB27AP51159 221 aa9.99□□□□□ -0.81
TRAPPC9-212ENST00000521944 IMMTQ16891 758 aaKnown RBP9.99□□□□□ -0.81
TRAPPC9-212ENST00000521944 COL28A1Q2UY09 1125 aa9.99□□□□□ -0.81
TRAPPC9-212ENST00000521944 RTP2Q5QGT7 225 aa9.99□□□□□ -0.81
TRAPPC9-212ENST00000521944 KIAA1211LQ6NV74 962 aa9.99□□□□□ -0.81
TRAPPC9-212ENST00000521944 WDR5BQ86VZ2 330 aa9.99□□□□□ -0.81
TRAPPC9-212ENST00000521944 PROSER1Q86XN7 944 aa9.99□□□□□ -0.81
TRAPPC9-212ENST00000521944 KSR1Q8IVT5 923 aa9.99□□□□□ -0.81
TRAPPC9-212ENST00000521944 ZNF511Q8NB15 262 aa9.99□□□□□ -0.81
TRAPPC9-212ENST00000521944 SMG8Q8ND04 991 aaKnown RBP9.99□□□□□ -0.81
TRAPPC9-212ENST00000521944 GSTCDQ8NEC7 633 aa9.99□□□□□ -0.81
TRAPPC9-212ENST00000521944 URGCPQ8TCY9 931 aa9.99□□□□□ -0.81
TRAPPC9-212ENST00000521944 IGDCC4Q8TDY8 1250 aa9.99□□□□□ -0.81
TRAPPC9-212ENST00000521944 RABGGTAQ92696 567 aa9.99□□□□□ -0.81
TRAPPC9-212ENST00000521944 ELSPBP1Q96BH3 223 aa9.99□□□□□ -0.81
TRAPPC9-212ENST00000521944 SCLT1Q96NL6 688 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms