RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 CERS4Q9HA82 394 aa10.33□□□□□ -0.76
CLK4-209ENST00000521621 SMIM28A0A1B0GU29 152 aa10.33□□□□□ -0.76
CLK4-209ENST00000521621 MEFVO15553 781 aaPredicted RBP10.33□□□□□ -0.76
CLK4-209ENST00000521621 XPOTO43592 962 aaKnown RBP10.33□□□□□ -0.76
CLK4-209ENST00000521621 B4GALT3O60512 393 aa10.33□□□□□ -0.76
CLK4-209ENST00000521621 NMT1P30419 496 aaKnown RBP10.33□□□□□ -0.76
CLK4-209ENST00000521621 SYKP43405 635 aa10.33□□□□□ -0.76
CLK4-209ENST00000521621 SCNN1GP51170 649 aa10.33□□□□□ -0.76
CLK4-209ENST00000521621 DSG1Q02413 1049 aa10.33□□□□□ -0.76
CLK4-209ENST00000521621 HYAL1Q12794 435 aa10.33□□□□□ -0.76
CLK4-209ENST00000521621 HERC4Q5GLZ8 1057 aaPredicted RBP10.33□□□□□ -0.76
CLK4-209ENST00000521621 SPOUT1Q5T280 376 aaKnown RBP10.33□□□□□ -0.76
CLK4-209ENST00000521621 FOXR2Q6PJQ5 311 aa10.33□□□□□ -0.76
CLK4-209ENST00000521621 KRBA2Q6ZNG9 492 aa10.33□□□□□ -0.76
CLK4-209ENST00000521621 FMR1NBQ8N0W7 255 aaPredicted RBP10.33□□□□□ -0.76
CLK4-209ENST00000521621 RNF169Q8NCN4 708 aa10.33□□□□□ -0.76
CLK4-209ENST00000521621 GOLGA5Q8TBA6 731 aa10.33□□□□□ -0.76
CLK4-209ENST00000521621 HLA-CQ95604 372 aa10.33□□□□□ -0.76
CLK4-209ENST00000521621 FBXL18Q96ME1 805 aa10.33□□□□□ -0.76
CLK4-209ENST00000521621 PARP2Q9UGN5 583 aa10.33□□□□□ -0.76
CLK4-209ENST00000521621 C2CD2Q9Y426 696 aa10.33□□□□□ -0.76
CLK4-209ENST00000521621 CHD9Q3L8U1 2897 aa10.33□□□□□ -0.76
CLK4-209ENST00000521621 C2orf71A6NGG8 1288 aa10.32□□□□□ -0.76
CLK4-209ENST00000521621 HNRNPDLO14979 420 aaKnown RBP10.32□□□□□ -0.76
CLK4-209ENST00000521621 RHOBTB3O94955 611 aa10.32□□□□□ -0.76
CLK4-209ENST00000521621 SRGAP2BP0DMP2 458 aa10.32□□□□□ -0.76
CLK4-209ENST00000521621 IGFBP4P22692 258 aa10.32□□□□□ -0.76
CLK4-209ENST00000521621 UPP1Q16831 310 aa10.32□□□□□ -0.76
CLK4-209ENST00000521621 SLC10A6Q3KNW5 377 aa10.32□□□□□ -0.76
CLK4-209ENST00000521621 KIAA0319Q5VV43 1072 aa10.32□□□□□ -0.76
CLK4-209ENST00000521621 DYMQ7RTS9 669 aa10.32□□□□□ -0.76
CLK4-209ENST00000521621 SPATA20Q8TB22 786 aa10.32□□□□□ -0.76
CLK4-209ENST00000521621 VN1R3Q9BXE9 311 aa10.32□□□□□ -0.76
CLK4-209ENST00000521621 DNAJB4Q9UDY4 337 aa10.32□□□□□ -0.76
CLK4-209ENST00000521621 SERTAD1Q9UHV2 236 aa10.32□□□□□ -0.76
CLK4-209ENST00000521621 MAPK13O15264 365 aa10.32□□□□□ -0.76
CLK4-209ENST00000521621 AKAP5P24588 427 aa10.32□□□□□ -0.76
CLK4-209ENST00000521621 AARSP49588 968 aaKnown RBP eCLIP10.32□□□□□ -0.76
CLK4-209ENST00000521621 MRPS5P82675 430 aaKnown RBP10.32□□□□□ -0.76
CLK4-209ENST00000521621 CACNB1Q02641 598 aaPredicted RBP10.32□□□□□ -0.76
CLK4-209ENST00000521621 RAD51AP2Q09MP3 1159 aa10.32□□□□□ -0.76
CLK4-209ENST00000521621 DPYDQ12882 1025 aa10.32□□□□□ -0.76
CLK4-209ENST00000521621 SURF1Q15526 300 aa10.32□□□□□ -0.76
CLK4-209ENST00000521621 TMEM132AQ24JP5 1023 aa10.32□□□□□ -0.76
CLK4-209ENST00000521621 TCEAL5Q5H9L2 206 aa10.32□□□□□ -0.76
CLK4-209ENST00000521621 FAM26FQ5R3K3 315 aa10.32□□□□□ -0.76
CLK4-209ENST00000521621 FOXD4L5Q5VV16 416 aaPredicted RBP10.32□□□□□ -0.76
CLK4-209ENST00000521621 SLC9A9Q8IVB4 645 aa10.32□□□□□ -0.76
CLK4-209ENST00000521621 SPATA18Q8TC71 538 aa10.32□□□□□ -0.76
CLK4-209ENST00000521621 SLC22A17Q8WUG5 538 aa10.32□□□□□ -0.76
CLK4-209ENST00000521621 BCL7CQ8WUZ0 217 aaPredicted RBP10.32□□□□□ -0.76
CLK4-209ENST00000521621 FOXD4L4Q8WXT5 416 aaPredicted RBP10.32□□□□□ -0.76
CLK4-209ENST00000521621 ALG13Q9NP73 1137 aaKnown RBP10.32□□□□□ -0.76
CLK4-209ENST00000521621 DZANK1Q9NVP4 752 aa10.32□□□□□ -0.76
CLK4-209ENST00000521621 ADAM28Q9UKQ2 775 aa10.32□□□□□ -0.76
CLK4-209ENST00000521621 HES2Q9Y543 173 aa10.32□□□□□ -0.76
CLK4-209ENST00000521621 ZC3H11AO75152 810 aaKnown RBP eCLIP10.31□□□□□ -0.76
CLK4-209ENST00000521621 KIF20AO95235 890 aa10.31□□□□□ -0.76
CLK4-209ENST00000521621 HOXB8P17481 243 aaPredicted RBP10.31□□□□□ -0.76
CLK4-209ENST00000521621 NDUFA8P51970 172 aa10.31□□□□□ -0.76
CLK4-209ENST00000521621 ERVFC1P60507 584 aa10.31□□□□□ -0.76
CLK4-209ENST00000521621 LONRF3Q496Y0 759 aa10.31□□□□□ -0.76
CLK4-209ENST00000521621 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.31□□□□□ -0.76
CLK4-209ENST00000521621 MSLNLQ96KJ4 702 aa10.31□□□□□ -0.76
CLK4-209ENST00000521621 ZFP42Q96MM3 310 aa10.31□□□□□ -0.76
CLK4-209ENST00000521621 UBQLN1Q9UMX0 589 aaKnown RBP10.31□□□□□ -0.76
CLK4-209ENST00000521621 SF3B1O75533 1304 aaKnown RBP eCLIP10.31□□□□□ -0.765e-7■■■■■ 98.4
CLK4-209ENST00000521621 RANBP2P49792 3224 aaKnown RBP10.31□□□□□ -0.76
CLK4-209ENST00000521621 EXTL3O43909 919 aa10.31□□□□□ -0.76
CLK4-209ENST00000521621 POMCP01189 267 aa10.31□□□□□ -0.76
CLK4-209ENST00000521621 FGFR3P22607 806 aa10.31□□□□□ -0.76
CLK4-209ENST00000521621 ADSSP30520 456 aa10.31□□□□□ -0.76
CLK4-209ENST00000521621 AFF1P51825 1210 aaKnown RBP10.31□□□□□ -0.76
CLK4-209ENST00000521621 FAM160A1Q05DH4 1040 aa10.31□□□□□ -0.76
CLK4-209ENST00000521621 PPP2R3AQ06190 1150 aa10.31□□□□□ -0.76
CLK4-209ENST00000521621 SNW1Q13573 536 aaKnown RBP10.31□□□□□ -0.76
CLK4-209ENST00000521621 DHX8Q14562 1220 aaKnown RBP10.31□□□□□ -0.76
CLK4-209ENST00000521621 PTPN14Q15678 1187 aa10.31□□□□□ -0.76
CLK4-209ENST00000521621 CD300LGQ6UXG3 332 aa10.31□□□□□ -0.76
CLK4-209ENST00000521621 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.31□□□□□ -0.76
CLK4-209ENST00000521621 PDILTQ8N807 584 aa10.31□□□□□ -0.76
CLK4-209ENST00000521621 CMASQ8NFW8 434 aaPredicted RBP10.31□□□□□ -0.76
CLK4-209ENST00000521621 PIK3R5Q8WYR1 880 aa10.31□□□□□ -0.76
CLK4-209ENST00000521621 ASB2Q96Q27 587 aa10.31□□□□□ -0.76
CLK4-209ENST00000521621 TCF25Q9BQ70 676 aa10.31□□□□□ -0.76
CLK4-209ENST00000521621 MSTO1Q9BUK6 570 aa10.31□□□□□ -0.76
CLK4-209ENST00000521621 UBE2ZQ9H832 354 aaPredicted RBP10.31□□□□□ -0.76
CLK4-209ENST00000521621 POLD4Q9HCU8 107 aa10.31□□□□□ -0.76
CLK4-209ENST00000521621 HCSTQ9UBK5 93 aa10.31□□□□□ -0.76
CLK4-209ENST00000521621 PRKAG3Q9UGI9 489 aa10.31□□□□□ -0.76
CLK4-209ENST00000521621 DPP7Q9UHL4 492 aa10.31□□□□□ -0.76
CLK4-209ENST00000521621 AGO2Q9UKV8 859 aaKnown RBP10.31□□□□□ -0.76
CLK4-209ENST00000521621 MTUS1Q9ULD2 1270 aa10.31□□□□□ -0.76
CLK4-209ENST00000521621 INPP5FQ9Y2H2 1132 aa10.31□□□□□ -0.76
CLK4-209ENST00000521621 BACE2Q9Y5Z0 518 aa10.31□□□□□ -0.76
CLK4-209ENST00000521621 DENND4AQ7Z401 1863 aa10.31□□□□□ -0.76
CLK4-209ENST00000521621 ANKRD63C9JTQ0 380 aa10.31□□□□□ -0.76
CLK4-209ENST00000521621 SYN3O14994 580 aa10.31□□□□□ -0.76
CLK4-209ENST00000521621 TRAPPC3O43617 180 aa10.31□□□□□ -0.76
CLK4-209ENST00000521621 ZNF202O95125 648 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms