RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 FBXW11Q9UKB1 542 aa16.7■□□□□ 0.26
CSMD1-207ENST00000520451 PCDHB6Q9Y5E3 794 aa16.7■□□□□ 0.26
CSMD1-207ENST00000520451 STK24Q9Y6E0 443 aa16.7■□□□□ 0.26
CSMD1-207ENST00000520451 ZMYND10O75800 440 aa16.69■□□□□ 0.26
CSMD1-207ENST00000520451 GLRA4Q5JXX5 417 aa16.69■□□□□ 0.26
CSMD1-207ENST00000520451 LIN9Q5TKA1 542 aa16.69■□□□□ 0.26
CSMD1-207ENST00000520451 SIX5Q8N196 739 aa16.69■□□□□ 0.26
CSMD1-207ENST00000520451 LNX1Q8TBB1 728 aaPredicted RBP16.69■□□□□ 0.26
CSMD1-207ENST00000520451 CLSTN3Q9BQT9 956 aa16.69■□□□□ 0.26
CSMD1-207ENST00000520451 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.69■□□□□ 0.26
CSMD1-207ENST00000520451 DNM3Q9UQ16 869 aa16.69■□□□□ 0.26
CSMD1-207ENST00000520451 MYO15AQ9UKN7 3530 aa16.68■□□□□ 0.26
CSMD1-207ENST00000520451 ZFHX2Q9C0A1 2572 aaPredicted RBP16.68■□□□□ 0.26
CSMD1-207ENST00000520451 CCDC169A6NNP5 214 aa16.68■□□□□ 0.26
CSMD1-207ENST00000520451 PP2D1A8MPX8 630 aa16.68■□□□□ 0.26
CSMD1-207ENST00000520451 E9PMD0 336 aa16.68■□□□□ 0.26
CSMD1-207ENST00000520451 K7ERI5 159 aa16.68■□□□□ 0.26
CSMD1-207ENST00000520451 GFRA3O60609 400 aa16.68■□□□□ 0.26
CSMD1-207ENST00000520451 CFHP08603 1231 aa16.68■□□□□ 0.26
CSMD1-207ENST00000520451 NPR3P17342 541 aa16.68■□□□□ 0.26
CSMD1-207ENST00000520451 PEX3P56589 373 aa16.68■□□□□ 0.26
CSMD1-207ENST00000520451 KRT79Q5XKE5 535 aa16.68■□□□□ 0.26
CSMD1-207ENST00000520451 PDXDC1Q6P996 788 aa16.68■□□□□ 0.26
CSMD1-207ENST00000520451 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.68■□□□□ 0.26
CSMD1-207ENST00000520451 PPP1R10Q96QC0 940 aaKnown RBP16.68■□□□□ 0.26
CSMD1-207ENST00000520451 DAXXQ9UER7 740 aaPredicted RBP16.68■□□□□ 0.26
CSMD1-207ENST00000520451 TNFSF13BQ9Y275 285 aa16.68■□□□□ 0.26
CSMD1-207ENST00000520451 PHLPP2Q6ZVD8 1323 aa16.68■□□□□ 0.26
CSMD1-207ENST00000520451 LAD1O00515 517 aa16.67■□□□□ 0.26
CSMD1-207ENST00000520451 ADAM12O43184 909 aa16.67■□□□□ 0.26
CSMD1-207ENST00000520451 HIP1RO75146 1068 aa16.67■□□□□ 0.26
CSMD1-207ENST00000520451 B3GAT3O94766 335 aa16.67■□□□□ 0.26
CSMD1-207ENST00000520451 LAMP2P13473 410 aa16.67■□□□□ 0.26
CSMD1-207ENST00000520451 AOC1P19801 751 aa16.67■□□□□ 0.26
CSMD1-207ENST00000520451 NPTX2P47972 431 aa16.67■□□□□ 0.26
CSMD1-207ENST00000520451 DMP1Q13316 513 aaPredicted RBP16.67■□□□□ 0.26
CSMD1-207ENST00000520451 ZNF568Q3ZCX4 644 aa16.67■□□□□ 0.26
CSMD1-207ENST00000520451 C8orf34Q49A92 452 aa16.67■□□□□ 0.26
CSMD1-207ENST00000520451 DTHD1Q6ZMT9 781 aa16.67■□□□□ 0.26
CSMD1-207ENST00000520451 DAW1Q8N136 415 aa16.67■□□□□ 0.26
CSMD1-207ENST00000520451 SLC44A3Q8N4M1 653 aa16.67■□□□□ 0.26
CSMD1-207ENST00000520451 NXPE3Q969Y0 559 aa16.67■□□□□ 0.26
CSMD1-207ENST00000520451 RUSC1Q9BVN2 902 aa16.67■□□□□ 0.26
CSMD1-207ENST00000520451 MTCL1Q9Y4B5 1905 aaKnown RBP16.66■□□□□ 0.26
CSMD1-207ENST00000520451 TMEM189-UBE2V1I3L0A0 370 aa16.66■□□□□ 0.26
CSMD1-207ENST00000520451 PI15O43692 258 aa16.66■□□□□ 0.26
CSMD1-207ENST00000520451 ST18O60284 1047 aa16.66■□□□□ 0.26
CSMD1-207ENST00000520451 C8AP07357 584 aa16.66■□□□□ 0.26
CSMD1-207ENST00000520451 HNRNPA1P09651 372 aaKnown RBP eCLIP16.66■□□□□ 0.26
CSMD1-207ENST00000520451 RFX1P22670 979 aa16.66■□□□□ 0.26
CSMD1-207ENST00000520451 FSHRP23945 695 aa16.66■□□□□ 0.26
CSMD1-207ENST00000520451 IGFBP6P24592 240 aaPredicted RBP16.66■□□□□ 0.26
CSMD1-207ENST00000520451 CDC25AP30304 524 aa16.66■□□□□ 0.26
CSMD1-207ENST00000520451 PRPHP41219 470 aa16.66■□□□□ 0.26
CSMD1-207ENST00000520451 CLCNKBP51801 687 aa16.66■□□□□ 0.26
CSMD1-207ENST00000520451 YARSP54577 528 aaKnown RBP16.66■□□□□ 0.26
CSMD1-207ENST00000520451 IL17AQ16552 155 aa16.66■□□□□ 0.26
CSMD1-207ENST00000520451 PPM1LQ5SGD2 360 aa16.66■□□□□ 0.26
CSMD1-207ENST00000520451 MCTP1Q6DN14 999 aa16.66■□□□□ 0.26
CSMD1-207ENST00000520451 DCLRE1AQ6PJP8 1040 aa16.66■□□□□ 0.26
CSMD1-207ENST00000520451 GRASPQ7Z6J2 395 aaPredicted RBP16.66■□□□□ 0.26
CSMD1-207ENST00000520451 CEP120Q8N960 986 aa16.66■□□□□ 0.26
CSMD1-207ENST00000520451 DRC1Q96MC2 740 aa16.66■□□□□ 0.26
CSMD1-207ENST00000520451 UROC1Q96N76 676 aa16.66■□□□□ 0.26
CSMD1-207ENST00000520451 ACO2Q99798 780 aaKnown RBP16.66■□□□□ 0.26
CSMD1-207ENST00000520451 CCDC94Q9BW85 323 aaPredicted RBP16.66■□□□□ 0.26
CSMD1-207ENST00000520451 MRPL4Q9BYD3 311 aaKnown RBP16.66■□□□□ 0.26
CSMD1-207ENST00000520451 CDT1Q9H211 546 aa16.66■□□□□ 0.26
CSMD1-207ENST00000520451 GOLGA2P5Q9HBQ8 144 aa16.66■□□□□ 0.26
CSMD1-207ENST00000520451 TOPORSQ9NS56 1045 aaPredicted RBP16.66■□□□□ 0.26
CSMD1-207ENST00000520451 WNT16Q9UBV4 365 aa16.66■□□□□ 0.26
CSMD1-207ENST00000520451 CA14Q9ULX7 337 aa16.66■□□□□ 0.26
CSMD1-207ENST00000520451 KIF3AQ9Y496 699 aa16.66■□□□□ 0.26
CSMD1-207ENST00000520451 DOCK8Q8NF50 2099 aa16.65■□□□□ 0.26
CSMD1-207ENST00000520451 SMIM28A0A1B0GU29 152 aa16.65■□□□□ 0.26
CSMD1-207ENST00000520451 STK25O00506 426 aa16.65■□□□□ 0.26
CSMD1-207ENST00000520451 CCL16O15467 120 aa16.65■□□□□ 0.26
CSMD1-207ENST00000520451 XYLBO75191 536 aa16.65■□□□□ 0.26
CSMD1-207ENST00000520451 SRFP11831 508 aa16.65■□□□□ 0.26
CSMD1-207ENST00000520451 FGFR3P22607 806 aa16.65■□□□□ 0.26
CSMD1-207ENST00000520451 OR1D2P34982 312 aa16.65■□□□□ 0.26
CSMD1-207ENST00000520451 GRM5P41594 1212 aa16.65■□□□□ 0.26
CSMD1-207ENST00000520451 OSTNP61366 133 aa16.65■□□□□ 0.26
CSMD1-207ENST00000520451 NTHL1P78549 312 aa16.65■□□□□ 0.26
CSMD1-207ENST00000520451 HTR4Q13639 388 aa16.65■□□□□ 0.26
CSMD1-207ENST00000520451 ZRSR1Q15695 479 aaKnown RBP16.65■□□□□ 0.26
CSMD1-207ENST00000520451 RINT1Q6NUQ1 792 aa16.65■□□□□ 0.26
CSMD1-207ENST00000520451 KCNK18Q7Z418 384 aa16.65■□□□□ 0.26
CSMD1-207ENST00000520451 ST13P5Q8NFI4 369 aaPredicted RBP16.65■□□□□ 0.26
CSMD1-207ENST00000520451 SLC7A14Q8TBB6 771 aa16.65■□□□□ 0.26
CSMD1-207ENST00000520451 RTP3Q9BQQ7 232 aa16.65■□□□□ 0.26
CSMD1-207ENST00000520451 MMTAG2Q9BU76 263 aaKnown RBP16.65■□□□□ 0.26
CSMD1-207ENST00000520451 TARS2Q9BW92 718 aaKnown RBP16.65■□□□□ 0.26
CSMD1-207ENST00000520451 TMEM134Q9H6X4 195 aa16.65■□□□□ 0.26
CSMD1-207ENST00000520451 KMT5AQ9NQR1 393 aa16.65■□□□□ 0.26
CSMD1-207ENST00000520451 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.65■□□□□ 0.26
CSMD1-207ENST00000520451 ARHGAP28Q9P2N2 729 aa16.65■□□□□ 0.26
CSMD1-207ENST00000520451 MTRRQ9UBK8 725 aa16.65■□□□□ 0.26
CSMD1-207ENST00000520451 POLIQ9UNA4 740 aa16.65■□□□□ 0.26
CSMD1-207ENST00000520451 VPS13AQ96RL7 3174 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms