RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 BCL7CQ8WUZ0 217 aaPredicted RBP10.33□□□□□ -0.76
CTNNA1-221ENST00000520339 TCP11Q8WWU5 503 aa10.33□□□□□ -0.76
CTNNA1-221ENST00000520339 CASP10Q92851 521 aa10.33□□□□□ -0.76
CTNNA1-221ENST00000520339 PGBD4Q96DM1 585 aa10.33□□□□□ -0.76
CTNNA1-221ENST00000520339 TMEM169Q96HH4 297 aa10.33□□□□□ -0.76
CTNNA1-221ENST00000520339 IGSF21Q96ID5 467 aa10.33□□□□□ -0.76
CTNNA1-221ENST00000520339 EIF2AK1Q9BQI3 630 aaKnown RBP10.33□□□□□ -0.76
CTNNA1-221ENST00000520339 ZNF395Q9H8N7 513 aaPredicted RBP10.33□□□□□ -0.76
CTNNA1-221ENST00000520339 BRMS1Q9HCU9 246 aa10.33□□□□□ -0.76
CTNNA1-221ENST00000520339 XPNPEP1Q9NQW7 623 aa10.33□□□□□ -0.76
CTNNA1-221ENST00000520339 HCFC2Q9Y5Z7 792 aa10.33□□□□□ -0.76
CTNNA1-221ENST00000520339 RALGAPA2Q2PPJ7 1873 aa10.32□□□□□ -0.76
CTNNA1-221ENST00000520339 PIEZO1Q92508 2521 aa10.32□□□□□ -0.76
CTNNA1-221ENST00000520339 MUC6Q6W4X9 2439 aa10.32□□□□□ -0.76
CTNNA1-221ENST00000520339 CDK2AP1O14519 115 aa10.32□□□□□ -0.76
CTNNA1-221ENST00000520339 B4GALT3O60512 393 aa10.32□□□□□ -0.76
CTNNA1-221ENST00000520339 ZC3H11AO75152 810 aaKnown RBP eCLIP10.32□□□□□ -0.76
CTNNA1-221ENST00000520339 CTSAP10619 480 aa10.32□□□□□ -0.76
CTNNA1-221ENST00000520339 SLC11A1P49279 550 aa10.32□□□□□ -0.76
CTNNA1-221ENST00000520339 RBM25P49756 843 aaKnown RBP10.32□□□□□ -0.76
CTNNA1-221ENST00000520339 AFF1P51825 1210 aaKnown RBP10.32□□□□□ -0.76
CTNNA1-221ENST00000520339 PTENP60484 403 aa10.32□□□□□ -0.76
CTNNA1-221ENST00000520339 ZXDAP98168 799 aa10.32□□□□□ -0.76
CTNNA1-221ENST00000520339 CYP4A11Q02928 519 aa10.32□□□□□ -0.76
CTNNA1-221ENST00000520339 CENPCQ03188 943 aa10.32□□□□□ -0.76
CTNNA1-221ENST00000520339 BMS1Q14692 1282 aaKnown RBP10.32□□□□□ -0.76
CTNNA1-221ENST00000520339 EMC2Q15006 297 aa10.32□□□□□ -0.76
CTNNA1-221ENST00000520339 CALCRLQ16602 461 aa10.32□□□□□ -0.76
CTNNA1-221ENST00000520339 TRIM67Q6ZTA4 783 aa10.32□□□□□ -0.76
CTNNA1-221ENST00000520339 BMP8AQ7Z5Y6 402 aa10.32□□□□□ -0.76
CTNNA1-221ENST00000520339 ZNF280BQ86YH2 543 aa10.32□□□□□ -0.76
CTNNA1-221ENST00000520339 TPH2Q8IWU9 490 aa10.32□□□□□ -0.76
CTNNA1-221ENST00000520339 DIS3L2Q8IYB7 885 aaKnown RBP10.32□□□□□ -0.76
CTNNA1-221ENST00000520339 VPS52Q8N1B4 723 aa10.32□□□□□ -0.76
CTNNA1-221ENST00000520339 RNF149Q8NC42 400 aa10.32□□□□□ -0.76
CTNNA1-221ENST00000520339 MFSD14AQ96MC6 490 aa10.32□□□□□ -0.76
CTNNA1-221ENST00000520339 MTMR9Q96QG7 549 aa10.32□□□□□ -0.76
CTNNA1-221ENST00000520339 APOL5Q9BWW9 433 aa10.32□□□□□ -0.76
CTNNA1-221ENST00000520339 VN1R3Q9BXE9 311 aa10.32□□□□□ -0.76
CTNNA1-221ENST00000520339 ZBP1Q9H171 429 aa10.32□□□□□ -0.76
CTNNA1-221ENST00000520339 ADAM7Q9H2U9 754 aa10.32□□□□□ -0.76
CTNNA1-221ENST00000520339 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.32□□□□□ -0.76
CTNNA1-221ENST00000520339 ANKEF1Q9NU02 776 aa10.32□□□□□ -0.76
CTNNA1-221ENST00000520339 TOR4AQ9NXH8 423 aa10.32□□□□□ -0.76
CTNNA1-221ENST00000520339 PCDHA12Q9UN75 941 aa10.32□□□□□ -0.76
CTNNA1-221ENST00000520339 INPP5FQ9Y2H2 1132 aa10.32□□□□□ -0.76
CTNNA1-221ENST00000520339 IRAK3Q9Y616 596 aa10.32□□□□□ -0.76
CTNNA1-221ENST00000520339 TMEM221A6NGB7 291 aa10.31□□□□□ -0.76
CTNNA1-221ENST00000520339 M0R296 226 aa10.31□□□□□ -0.76
CTNNA1-221ENST00000520339 DDHD2O94830 711 aa10.31□□□□□ -0.76
CTNNA1-221ENST00000520339 TIMP2P16035 220 aa10.31□□□□□ -0.76
CTNNA1-221ENST00000520339 NCLP19338 710 aaKnown RBP10.31□□□□□ -0.76
CTNNA1-221ENST00000520339 ARL2P36404 184 aa10.31□□□□□ -0.76
CTNNA1-221ENST00000520339 NEK4P51957 841 aa10.31□□□□□ -0.76
CTNNA1-221ENST00000520339 RNASELQ05823 741 aaKnown RBP10.31□□□□□ -0.76
CTNNA1-221ENST00000520339 POU5F1BQ06416 359 aa10.31□□□□□ -0.76
CTNNA1-221ENST00000520339 MXD4Q14582 209 aaPredicted RBP10.31□□□□□ -0.76
CTNNA1-221ENST00000520339 SMG8Q8ND04 991 aaKnown RBP10.31□□□□□ -0.76
CTNNA1-221ENST00000520339 ASAP3Q8TDY4 903 aa10.31□□□□□ -0.76
CTNNA1-221ENST00000520339 SLC22A17Q8WUG5 538 aa10.31□□□□□ -0.76
CTNNA1-221ENST00000520339 AUTS2Q8WXX7 1259 aa10.31□□□□□ -0.76
CTNNA1-221ENST00000520339 C2orf49Q9BVC5 232 aaPredicted RBP10.31□□□□□ -0.76
CTNNA1-221ENST00000520339 KCNH6Q9H252 994 aa10.31□□□□□ -0.76
CTNNA1-221ENST00000520339 TMEM60Q9H2L4 133 aa10.31□□□□□ -0.76
CTNNA1-221ENST00000520339 TTC12Q9H892 705 aaPredicted RBP10.31□□□□□ -0.76
CTNNA1-221ENST00000520339 RSAD1Q9HA92 442 aa10.31□□□□□ -0.76
CTNNA1-221ENST00000520339 DNAJB4Q9UDY4 337 aa10.31□□□□□ -0.76
CTNNA1-221ENST00000520339 CDH22Q9UJ99 828 aa10.31□□□□□ -0.76
CTNNA1-221ENST00000520339 HRH3Q9Y5N1 445 aa10.31□□□□□ -0.76
CTNNA1-221ENST00000520339 USP3Q9Y6I4 520 aa10.31□□□□□ -0.76
CTNNA1-221ENST00000520339 CNTNAP2Q9UHC6 1331 aa10.31□□□□□ -0.76
CTNNA1-221ENST00000520339 A0A087WWV3 80 aa10.3□□□□□ -0.76
CTNNA1-221ENST00000520339 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.3□□□□□ -0.76
CTNNA1-221ENST00000520339 INPPL1O15357 1258 aa10.3□□□□□ -0.76
CTNNA1-221ENST00000520339 TSPAN1O60635 241 aa10.3□□□□□ -0.76
CTNNA1-221ENST00000520339 DGAT1O75907 488 aa10.3□□□□□ -0.76
CTNNA1-221ENST00000520339 ALDH2P05091 517 aa10.3□□□□□ -0.76
CTNNA1-221ENST00000520339 XRCC6P12956 609 aaKnown RBP eCLIP10.3□□□□□ -0.76
CTNNA1-221ENST00000520339 AXLP30530 894 aa10.3□□□□□ -0.76
CTNNA1-221ENST00000520339 TXKP42681 527 aa10.3□□□□□ -0.76
CTNNA1-221ENST00000520339 PSMA6P60900 246 aaKnown RBP10.3□□□□□ -0.76
CTNNA1-221ENST00000520339 ITIH3Q06033 890 aa10.3□□□□□ -0.76
CTNNA1-221ENST00000520339 GIT2Q14161 759 aa10.3□□□□□ -0.76
CTNNA1-221ENST00000520339 PCBP1Q15365 356 aaKnown RBP eCLIP10.3□□□□□ -0.76
CTNNA1-221ENST00000520339 C12orf76Q8N812 135 aaPredicted RBP10.3□□□□□ -0.76
CTNNA1-221ENST00000520339 CNNM3Q8NE01 707 aa10.3□□□□□ -0.76
CTNNA1-221ENST00000520339 URGCPQ8TCY9 931 aa10.3□□□□□ -0.76
CTNNA1-221ENST00000520339 CCDC51Q96ER9 411 aa10.3□□□□□ -0.76
CTNNA1-221ENST00000520339 FBXL18Q96ME1 805 aa10.3□□□□□ -0.76
CTNNA1-221ENST00000520339 NECTIN4Q96NY8 510 aa10.3□□□□□ -0.76
CTNNA1-221ENST00000520339 TMEM175Q9BSA9 504 aa10.3□□□□□ -0.76
CTNNA1-221ENST00000520339 EIF2AQ9BY44 585 aaKnown RBP10.3□□□□□ -0.76
CTNNA1-221ENST00000520339 GBP3Q9H0R5 595 aa10.3□□□□□ -0.76
CTNNA1-221ENST00000520339 KANSL3Q9P2N6 904 aa10.3□□□□□ -0.76
CTNNA1-221ENST00000520339 EVPLQ92817 2033 aa10.29□□□□□ -0.76
CTNNA1-221ENST00000520339 TECTAO75443 2155 aa10.29□□□□□ -0.76
CTNNA1-221ENST00000520339 NEMFO60524 1076 aa10.29□□□□□ -0.76
CTNNA1-221ENST00000520339 POMCP01189 267 aa10.29□□□□□ -0.76
CTNNA1-221ENST00000520339 SPATA31C1P0DKV0 1188 aa10.29□□□□□ -0.76
CTNNA1-221ENST00000520339 ITGA4P13612 1032 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms