RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 ING3Q9NXR8 418 aa6.52□□□□□ -1.37
HMGB1P46-201ENST00000520062 MOCS1Q9NZB8 636 aa6.52□□□□□ -1.37
HMGB1P46-201ENST00000520062 STAP2Q9UGK3 403 aa6.52□□□□□ -1.37
HMGB1P46-201ENST00000520062 AJAP1Q9UKB5 411 aaPredicted RBP6.52□□□□□ -1.37
HMGB1P46-201ENST00000520062 SNX13Q9Y5W8 968 aa6.52□□□□□ -1.37
HMGB1P46-201ENST00000520062 IRAK3Q9Y616 596 aa6.52□□□□□ -1.37
HMGB1P46-201ENST00000520062 LRRC10BA6NIK2 292 aa6.51□□□□□ -1.37
HMGB1P46-201ENST00000520062 F5H423 210 aaPredicted RBP6.51□□□□□ -1.37
HMGB1P46-201ENST00000520062 KPNA5O15131 536 aa6.51□□□□□ -1.37
HMGB1P46-201ENST00000520062 NPR1P16066 1061 aa6.51□□□□□ -1.37
HMGB1P46-201ENST00000520062 TYRP1P17643 537 aa6.51□□□□□ -1.37
HMGB1P46-201ENST00000520062 EN2P19622 333 aaPredicted RBP6.51□□□□□ -1.37
HMGB1P46-201ENST00000520062 TNFSF4P23510 183 aa6.51□□□□□ -1.37
HMGB1P46-201ENST00000520062 PRDX5P30044 214 aa6.51□□□□□ -1.37
HMGB1P46-201ENST00000520062 SLC7A1P30825 629 aa6.51□□□□□ -1.37
HMGB1P46-201ENST00000520062 DLX2Q07687 328 aaPredicted RBP6.51□□□□□ -1.37
HMGB1P46-201ENST00000520062 ZNF543Q08ER8 600 aa6.51□□□□□ -1.37
HMGB1P46-201ENST00000520062 USP10Q14694 798 aaKnown RBP6.51□□□□□ -1.37
HMGB1P46-201ENST00000520062 CNGA2Q16280 664 aa6.51□□□□□ -1.37
HMGB1P46-201ENST00000520062 MLANAQ16655 118 aa6.51□□□□□ -1.37
HMGB1P46-201ENST00000520062 FLYWCH1Q4VC44 716 aa6.51□□□□□ -1.37
HMGB1P46-201ENST00000520062 ZMAT1Q5H9K5 638 aa6.51□□□□□ -1.37
HMGB1P46-201ENST00000520062 EMC10Q5UCC4 262 aa6.51□□□□□ -1.37
HMGB1P46-201ENST00000520062 IZUMO3Q5VZ72 239 aa6.51□□□□□ -1.37
HMGB1P46-201ENST00000520062 ZNF572Q7Z3I7 529 aaPredicted RBP6.51□□□□□ -1.37
HMGB1P46-201ENST00000520062 FAM90A1Q86YD7 464 aa6.51□□□□□ -1.37
HMGB1P46-201ENST00000520062 KLHL36Q8N4N3 616 aa6.51□□□□□ -1.37
HMGB1P46-201ENST00000520062 SH2D3CQ8N5H7 860 aa6.51□□□□□ -1.37
HMGB1P46-201ENST00000520062 KBTBD7Q8WVZ9 684 aa6.51□□□□□ -1.37
HMGB1P46-201ENST00000520062 BRI3BPQ8WY22 251 aa6.51□□□□□ -1.37
HMGB1P46-201ENST00000520062 MRGPRX1Q96LB2 322 aa6.51□□□□□ -1.37
HMGB1P46-201ENST00000520062 WDR12Q9GZL7 423 aaKnown RBP6.51□□□□□ -1.37
HMGB1P46-201ENST00000520062 TMEM168Q9H0V1 697 aa6.51□□□□□ -1.37
HMGB1P46-201ENST00000520062 SLC6A15Q9H2J7 730 aa6.51□□□□□ -1.37
HMGB1P46-201ENST00000520062 BARX1Q9HBU1 254 aaPredicted RBP6.51□□□□□ -1.37
HMGB1P46-201ENST00000520062 PNPLA8Q9NP80 782 aa6.51□□□□□ -1.37
HMGB1P46-201ENST00000520062 GNL3LQ9NVN8 582 aaKnown RBP6.51□□□□□ -1.37
HMGB1P46-201ENST00000520062 NTMQ9P121 344 aa6.51□□□□□ -1.37
HMGB1P46-201ENST00000520062 ADAM29Q9UKF5 820 aa6.51□□□□□ -1.37
HMGB1P46-201ENST00000520062 OGDHLQ9ULD0 1010 aa6.51□□□□□ -1.37
HMGB1P46-201ENST00000520062 CORO2BQ9UQ03 480 aa6.51□□□□□ -1.37
HMGB1P46-201ENST00000520062 LRCH1Q9Y2L9 728 aa6.51□□□□□ -1.37
HMGB1P46-201ENST00000520062 RBM8AQ9Y5S9 174 aaKnown RBP6.51□□□□□ -1.37
HMGB1P46-201ENST00000520062 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.51□□□□□ -1.37
HMGB1P46-201ENST00000520062 SH3D21A4FU49 640 aa6.5□□□□□ -1.37
HMGB1P46-201ENST00000520062 TOX4O94842 621 aa6.5□□□□□ -1.37
HMGB1P46-201ENST00000520062 PCSK1P29120 753 aa6.5□□□□□ -1.37
HMGB1P46-201ENST00000520062 CSF2RBP32927 897 aa6.5□□□□□ -1.37
HMGB1P46-201ENST00000520062 FMO1Q01740 532 aa6.5□□□□□ -1.37
HMGB1P46-201ENST00000520062 ANO1Q5XXA6 986 aa6.5□□□□□ -1.37
HMGB1P46-201ENST00000520062 ZNF526Q8TF50 670 aaPredicted RBP6.5□□□□□ -1.37
HMGB1P46-201ENST00000520062 POF1BQ8WVV4 589 aa6.5□□□□□ -1.37
HMGB1P46-201ENST00000520062 MRPL46Q9H2W6 279 aaKnown RBP6.5□□□□□ -1.37
HMGB1P46-201ENST00000520062 FAM184BQ9ULE4 1060 aa6.5□□□□□ -1.37
HMGB1P46-201ENST00000520062 ATRNL1Q5VV63 1379 aa6.49□□□□□ -1.37
HMGB1P46-201ENST00000520062 C9orf118A6NHY6 69 aa6.49□□□□□ -1.37
HMGB1P46-201ENST00000520062 F2RL2O00254 374 aa6.49□□□□□ -1.37
HMGB1P46-201ENST00000520062 TBX3O15119 743 aa6.49□□□□□ -1.37
HMGB1P46-201ENST00000520062 IL18RAPO95256 599 aa6.49□□□□□ -1.37
HMGB1P46-201ENST00000520062 KITP10721 976 aa6.49□□□□□ -1.37
HMGB1P46-201ENST00000520062 BRAFP15056 766 aa6.49□□□□□ -1.37
HMGB1P46-201ENST00000520062 ALOX15P16050 662 aaPredicted RBP6.49□□□□□ -1.37
HMGB1P46-201ENST00000520062 TSHRP16473 764 aa6.49□□□□□ -1.37
HMGB1P46-201ENST00000520062 GLDCP23378 1020 aa6.49□□□□□ -1.37
HMGB1P46-201ENST00000520062 PTPN7P35236 360 aa6.49□□□□□ -1.37
HMGB1P46-201ENST00000520062 STT3AP46977 705 aa6.49□□□□□ -1.37
HMGB1P46-201ENST00000520062 ADCY7P51828 1080 aa6.49□□□□□ -1.37
HMGB1P46-201ENST00000520062 DAG1Q14118 895 aa6.49□□□□□ -1.37
HMGB1P46-201ENST00000520062 KHDC1LQ5JSQ8 128 aa6.49□□□□□ -1.37
HMGB1P46-201ENST00000520062 FAM26FQ5R3K3 315 aa6.49□□□□□ -1.37
HMGB1P46-201ENST00000520062 PRAMEF14Q5SWL7 426 aa6.49□□□□□ -1.37
HMGB1P46-201ENST00000520062 USP30Q70CQ3 517 aa6.49□□□□□ -1.37
HMGB1P46-201ENST00000520062 PPP1R3BQ86XI6 285 aa6.49□□□□□ -1.37
HMGB1P46-201ENST00000520062 PLXDC1Q8IUK5 500 aa6.49□□□□□ -1.37
HMGB1P46-201ENST00000520062 KCNN1Q92952 543 aa6.49□□□□□ -1.37
HMGB1P46-201ENST00000520062 CDC5LQ99459 802 aaKnown RBP6.49□□□□□ -1.37
HMGB1P46-201ENST00000520062 KIAA1683Q9H0B3 1180 aa6.49□□□□□ -1.37
HMGB1P46-201ENST00000520062 LDAHQ9H6V9 325 aa6.49□□□□□ -1.37
HMGB1P46-201ENST00000520062 CERS4Q9HA82 394 aa6.49□□□□□ -1.37
HMGB1P46-201ENST00000520062 KCNK12Q9HB15 430 aa6.49□□□□□ -1.37
HMGB1P46-201ENST00000520062 GPRC5BQ9NZH0 403 aa6.49□□□□□ -1.37
HMGB1P46-201ENST00000520062 ZDHHC8Q9ULC8 765 aa6.49□□□□□ -1.37
HMGB1P46-201ENST00000520062 PAXBP1Q9Y5B6 917 aa6.49□□□□□ -1.37
HMGB1P46-201ENST00000520062 USP19O94966 1318 aa6.49□□□□□ -1.37
HMGB1P46-201ENST00000520062 CCDC189A1A4V9 331 aa6.48□□□□□ -1.37
HMGB1P46-201ENST00000520062 PMS2P1A4D2B8 440 aa6.48□□□□□ -1.37
HMGB1P46-201ENST00000520062 FGAP02671 866 aa6.48□□□□□ -1.37
HMGB1P46-201ENST00000520062 FLT3LGP49771 235 aa6.48□□□□□ -1.37
HMGB1P46-201ENST00000520062 ARFIP2P53365 341 aa6.48□□□□□ -1.37
HMGB1P46-201ENST00000520062 BPIFB4P59827 614 aa6.48□□□□□ -1.37
HMGB1P46-201ENST00000520062 TNFAIP2Q03169 654 aa6.48□□□□□ -1.37
HMGB1P46-201ENST00000520062 NFYCQ13952 458 aa6.48□□□□□ -1.37
HMGB1P46-201ENST00000520062 VWA3BQ502W6 1294 aa6.48□□□□□ -1.37
HMGB1P46-201ENST00000520062 PRR16Q569H4 304 aa6.48□□□□□ -1.37
HMGB1P46-201ENST00000520062 FAM47AQ5JRC9 791 aa6.48□□□□□ -1.37
HMGB1P46-201ENST00000520062 FAM209BQ5JX69 171 aa6.48□□□□□ -1.37
HMGB1P46-201ENST00000520062 DACT2Q5SW24 774 aa6.48□□□□□ -1.37
HMGB1P46-201ENST00000520062 OTUD7BQ6GQQ9 843 aa6.48□□□□□ -1.37
HMGB1P46-201ENST00000520062 CNKSR3Q6P9H4 555 aa6.48□□□□□ -1.37
HMGB1P46-201ENST00000520062 ANKRD42Q8N9B4 389 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms